Author: bugman
Date: Mon Sep 22 12:21:31 2014
New Revision: 25951
URL: http://svn.gna.org/viewcvs/relax?rev=25951&view=rev
Log:
Huge speed up for the Frame_order.test_auto_analysis user function.
The pseudo-Brownian dynamics simulation via the frame_order.simulate user
function has been
massively speed up to allow the test to be almost as fast as before.
Modified:
branches/frame_order_cleanup/test_suite/system_tests/scripts/frame_order/cam/auto_analysis_to_rigid.py
Modified:
branches/frame_order_cleanup/test_suite/system_tests/scripts/frame_order/cam/auto_analysis_to_rigid.py
URL:
http://svn.gna.org/viewcvs/relax/branches/frame_order_cleanup/test_suite/system_tests/scripts/frame_order/cam/auto_analysis_to_rigid.py?rev=25951&r1=25950&r2=25951&view=diff
==============================================================================
---
branches/frame_order_cleanup/test_suite/system_tests/scripts/frame_order/cam/auto_analysis_to_rigid.py
(original)
+++
branches/frame_order_cleanup/test_suite/system_tests/scripts/frame_order/cam/auto_analysis_to_rigid.py
Mon Sep 22 12:21:31 2014
@@ -71,6 +71,11 @@
OPT_MC = Optimisation_settings()
OPT_MC.add_min(min_algor='simplex', func_tol=1e-2, max_iter=5,
sobol_max_points=1)
+# Pseudo-Brownian simulation (for the frame_order.simulate user function).
+STEP_SIZE = 2.0
+SNAPSHOT = 2
+TOTAL = 5
+
# Set up the base data pipes.
#############################
@@ -195,4 +200,4 @@
############
# Do not change!
-Frame_order_analysis(data_pipe_full=DATA, data_pipe_subset=SUBSET,
pipe_bundle=PIPE_BUNDLE, results_dir=ds.tmpdir, opt_rigid=OPT_RIGID,
opt_subset=OPT_SUBSET, opt_full=OPT_FULL, opt_mc=OPT_MC, mc_sim_num=MC_NUM,
models=MODELS)
+Frame_order_analysis(data_pipe_full=DATA, data_pipe_subset=SUBSET,
pipe_bundle=PIPE_BUNDLE, results_dir=ds.tmpdir, opt_rigid=OPT_RIGID,
opt_subset=OPT_SUBSET, opt_full=OPT_FULL, opt_mc=OPT_MC, mc_sim_num=MC_NUM,
models=MODELS, brownian_step_size=STEP_SIZE, brownian_snapshot=SNAPSHOT,
brownian_total=TOTAL)
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