Author: bugman
Date: Wed Dec 10 14:12:18 2014
New Revision: 27055
URL: http://svn.gna.org/viewcvs/relax?rev=27055&view=rev
Log:
Some more fixes for the Structure.test_align_molecules system test.
Modified:
trunk/test_suite/system_tests/structure.py
Modified: trunk/test_suite/system_tests/structure.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/test_suite/system_tests/structure.py?rev=27055&r1=27054&r2=27055&view=diff
==============================================================================
--- trunk/test_suite/system_tests/structure.py (original)
+++ trunk/test_suite/system_tests/structure.py Wed Dec 10 14:12:18 2014
@@ -213,14 +213,14 @@
# Translate and rotate the models.
R = zeros((3, 3), float64)
axis_angle_to_R(array([1, 0, 0], float64), 1.0, R)
- self.interpreter.structure.rotate(R=R, model=1, atom_id='#1')
+ self.interpreter.structure.rotate(R=R, atom_id='#1')
axis_angle_to_R(array([0, 0, 1], float64), 2.0, R)
- self.interpreter.structure.rotate(R=R, model=2, atom_id='#2')
- self.interpreter.structure.translate(T=[1., 1., 1.], model=1,
atom_id='#1')
- self.interpreter.structure.translate(T=[0., 0., 1.], model=2,
atom_id='#2')
+ self.interpreter.structure.rotate(R=R, atom_id='#2')
+ self.interpreter.structure.translate(T=[1., 1., 1.], atom_id='#1')
+ self.interpreter.structure.translate(T=[0., 0., 1.], atom_id='#2')
# The alignment.
- #self.interpreter.structure.align(pipes=['ref', 'align'],
molecules=['ref', '1', '2'], method='fit to first', atom_id='@N,H')
+ self.interpreter.structure.align(pipes=['ref', 'align'],
molecules=['ref', '1', '2'], method='fit to first', atom_id='@N,H')
# Output PDB to stdout to help in debugging.
self.interpreter.structure.write_pdb(file=sys.stdout)
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