Author: tlinnet Date: Wed Jan 14 18:46:35 2015 New Revision: 27179 URL: http://svn.gna.org/viewcvs/relax?rev=27179&view=rev Log: Moved LICENSE and package info for nmrglue into extern/nmrglue.
Task #7873 (https://gna.org/task/index.php?7873): Write wrapper function to nmrglue, to read .ft2 files and process them. Homepage: http://www.nmrglue.com/ Link to nmrglue discussion: https://groups.google.com/forum/#!forum/nmrglue-discuss The code is develop at Github: https://github.com/jjhelmus/nmrglue/ Google code: https://code.google.com/p/nmrglue/ Documentation: http://nmrglue.readthedocs.org/en/latest/index.html Added: branches/nmrglue/extern/nmrglue/LICENSE.txt - copied, changed from r27178, branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/LICENSE.txt branches/nmrglue/extern/nmrglue/PKG-INFO - copied, changed from r27178, branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/PKG-INFO branches/nmrglue/extern/nmrglue/README.rst - copied, changed from r27178, branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/README.rst Removed: branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/LICENSE.txt branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/PKG-INFO branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/README.rst Copied: branches/nmrglue/extern/nmrglue/LICENSE.txt (from r27178, branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/LICENSE.txt) URL: http://svn.gna.org/viewcvs/relax/branches/nmrglue/extern/nmrglue/LICENSE.txt?p2=branches/nmrglue/extern/nmrglue/LICENSE.txt&p1=branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/LICENSE.txt&r1=27178&r2=27179&rev=27179&view=diff ============================================================================== (empty) Copied: branches/nmrglue/extern/nmrglue/PKG-INFO (from r27178, branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/PKG-INFO) URL: http://svn.gna.org/viewcvs/relax/branches/nmrglue/extern/nmrglue/PKG-INFO?p2=branches/nmrglue/extern/nmrglue/PKG-INFO&p1=branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/PKG-INFO&r1=27178&r2=27179&rev=27179&view=diff ============================================================================== (empty) Copied: branches/nmrglue/extern/nmrglue/README.rst (from r27178, branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/README.rst) URL: http://svn.gna.org/viewcvs/relax/branches/nmrglue/extern/nmrglue/README.rst?p2=branches/nmrglue/extern/nmrglue/README.rst&p1=branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/README.rst&r1=27178&r2=27179&rev=27179&view=diff ============================================================================== (empty) Removed: branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/LICENSE.txt URL: http://svn.gna.org/viewcvs/relax/branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/LICENSE.txt?rev=27178&view=auto ============================================================================== --- branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/LICENSE.txt (original) +++ branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/LICENSE.txt (removed) @@ -1,38 +0,0 @@ -Copyright Notice and Statement for the nmrglue Project - - -Copyright (c) 2010-2015 Jonathan J. Helmus -All rights reserved. - - -Redistribution and use in source and binary forms, with or without -modification, are permitted provided that the following conditions are -met: - - -a. Redistributions of source code must retain the above copyright - notice, this list of conditions and the following disclaimer. - - -b. Redistributions in binary form must reproduce the above copyright - notice, this list of conditions and the following disclaimer in the - documentation and/or other materials provided with the - distribution. - - -c. Neither the name of the author nor the names of contributors may - be used to endorse or promote products derived from this software - without specific prior written permission. - - -THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS -"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT -LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR -A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT -OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, -SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT -LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, -DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY -THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT -(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE -OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. Removed: branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/PKG-INFO URL: http://svn.gna.org/viewcvs/relax/branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/PKG-INFO?rev=27178&view=auto ============================================================================== --- branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/PKG-INFO (original) +++ branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/PKG-INFO (removed) @@ -1,71 +0,0 @@ -Metadata-Version: 1.1 -Name: nmrglue -Version: 0.5 -Summary: A module for working with NMR data in Python -Home-page: http://www.nmrglue.com -Author: Jonathan J. Helmus -Author-email: jjhel...@gmail.com -License: New BSD License -Description: ======= - nmrglue - ======= - - What is nmrglue? - ---------------- - - nmrglue is a module for working with NMR data in Python. When used with the - numpy, scipy, and matplotlib packages nmrglue provides a robust interpreted - environment for processing, analysing, and inspecting NMR data. - - What can nmrglue do? - -------------------- - - nmrglue has the ability to read, write and convert between a number of common - NMR file formats including Varian, Bruker, NMRPipe, and Sparky files. The - files, which are represented in python as dictionaries of spectral parameters - and Numpy array objects, can be easily examined, modified and processed as - desired. - - nmrglue provides a number of common functions for processing NMR data such as - apodization, spectral shifting, Fourier and other transformations, baseline - smoothing and flattening, and linear prediction. In addition new processing - schemes can be implemented easily using the nmrglue provided functions and the - multitude of numerical routines provided by the Numpy and Scipy packages. - - When used in conjunction with the matplotlib (or other) python plotting - library nmrglue can be used to create publication quality figures of NMR - spectrum or examine data interactively. - - nmrglue can be used to analysis NMR data, with routines to perform peak - picking, multidimensional lineshape fitting (peak fitting), and peak - integration. New analysis methods can be rapidly developed and tested in - Python or by integrating Fortran and C/C++ code. - - To get started, see our online documentation: - http://nmrglue.readthedocs.org/en/latest/index.html - - Citing nmrglue - -------------- - - If you find nmrglue useful in your research please cite the package as: - - J.J. Helmus, C.P. Jaroniec, Nmrglue: An open source Python package for the - analysis of multidimensional NMR data, J. Biomol. NMR 2013, 55, 355-367, - http://dx.doi.org/10.1007/s10858-013-9718-x. - -Platform: UNKNOWN -Classifier: Intended Audience :: Science/Research -Classifier: Intended Audience :: Developers -Classifier: License :: OSI Approved :: BSD License -Classifier: Programming Language :: Python :: 2 -Classifier: Programming Language :: Python :: 2.6 -Classifier: Programming Language :: Python :: 2.7 -Classifier: Programming Language :: Python :: 3 -Classifier: Programming Language :: Python :: 3.3 -Classifier: Programming Language :: Python :: 3.4 -Classifier: Topic :: Scientific/Engineering -Classifier: Operating System :: MacOS :: MacOS X -Classifier: Operating System :: Microsoft :: Windows -Classifier: Operating System :: POSIX :: Linux -Requires: numpy -Requires: scipy Removed: branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/README.rst URL: http://svn.gna.org/viewcvs/relax/branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/README.rst?rev=27178&view=auto ============================================================================== --- branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/README.rst (original) +++ branches/nmrglue/extern/nmrglue_temp/nmrglue_0_5/README.rst (removed) @@ -1,46 +0,0 @@ -======= -nmrglue -======= - -What is nmrglue? ----------------- - -nmrglue is a module for working with NMR data in Python. When used with the -numpy, scipy, and matplotlib packages nmrglue provides a robust interpreted -environment for processing, analysing, and inspecting NMR data. - -What can nmrglue do? --------------------- - -nmrglue has the ability to read, write and convert between a number of common -NMR file formats including Varian, Bruker, NMRPipe, and Sparky files. The -files, which are represented in python as dictionaries of spectral parameters -and Numpy array objects, can be easily examined, modified and processed as -desired. - -nmrglue provides a number of common functions for processing NMR data such as -apodization, spectral shifting, Fourier and other transformations, baseline -smoothing and flattening, and linear prediction. In addition new processing -schemes can be implemented easily using the nmrglue provided functions and the -multitude of numerical routines provided by the Numpy and Scipy packages. - -When used in conjunction with the matplotlib (or other) python plotting -library nmrglue can be used to create publication quality figures of NMR -spectrum or examine data interactively. - -nmrglue can be used to analysis NMR data, with routines to perform peak -picking, multidimensional lineshape fitting (peak fitting), and peak -integration. New analysis methods can be rapidly developed and tested in -Python or by integrating Fortran and C/C++ code. - -To get started, see our online documentation: -http://nmrglue.readthedocs.org/en/latest/index.html - -Citing nmrglue --------------- - -If you find nmrglue useful in your research please cite the package as: - -J.J. Helmus, C.P. Jaroniec, Nmrglue: An open source Python package for the -analysis of multidimensional NMR data, J. Biomol. NMR 2013, 55, 355-367, -http://dx.doi.org/10.1007/s10858-013-9718-x. _______________________________________________ relax (http://www.nmr-relax.com) This is the relax-commits mailing list relax-commits@gna.org To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-commits