Author: tlinnet Date: Wed Jan 14 18:46:42 2015 New Revision: 27182 URL: http://svn.gna.org/viewcvs/relax?rev=27182&view=rev Log: Fix for systemtest Nmrglue.test_nmrglue_read, after removing 8MB test file.
The test is now performed on a smaller different file. Task #7873 (https://gna.org/task/index.php?7873): Write wrapper function to nmrglue, to read .ft2 files and process them. Homepage: http://www.nmrglue.com/ Link to nmrglue discussion: https://groups.google.com/forum/#!forum/nmrglue-discuss The code is develop at Github: https://github.com/jjhelmus/nmrglue/ Google code: https://code.google.com/p/nmrglue/ Documentation: http://nmrglue.readthedocs.org/en/latest/index.html Modified: branches/nmrglue/test_suite/system_tests/nmrglue.py Modified: branches/nmrglue/test_suite/system_tests/nmrglue.py URL: http://svn.gna.org/viewcvs/relax/branches/nmrglue/test_suite/system_tests/nmrglue.py?rev=27182&r1=27181&r2=27182&view=diff ============================================================================== --- branches/nmrglue/test_suite/system_tests/nmrglue.py (original) +++ branches/nmrglue/test_suite/system_tests/nmrglue.py Wed Jan 14 18:46:42 2015 @@ -147,7 +147,8 @@ ds.tmpdir = mkdtemp() # Create path to nmrglue test data. - ds.ng_test = status.install_path +sep+ 'extern' +sep+ 'nmrglue' +sep+ 'nmrglue_0_5' +sep+ 'tests' +sep+ 'pipe_proc_tests' + ds.base_path = status.install_path + sep+'test_suite'+sep+'shared_data'+sep+'dispersion'+sep+'repeated_analysis'+sep+'SOD1' + ds.ng_test = ds.base_path +sep+ 'cpmg_disp_sod1d90a_060518' +sep+ 'cpmg_disp_sod1d90a_060518_normal.fid' +sep+ 'ft2_data' def setup_plot_contour(self, show=False): @@ -416,7 +417,7 @@ """Test the userfunction spectrum.nmrglue_read.""" # Read the spectrum. - fname = 'freq_real.ft2' + fname = '128_0_FT.ft2' sp_id = 'test' self.interpreter.spectrum.nmrglue_read(file=fname, dir=ds.ng_test, nmrglue_id=sp_id) @@ -429,12 +430,12 @@ data = cdp.nmrglue[sp_id].data # Test the data. - self.assertEqual(udic[0]['label'], '15N') - self.assertEqual(udic[1]['label'], '13C') + self.assertEqual(udic[0]['label'], 'N15') + self.assertEqual(udic[1]['label'], 'H1') self.assertEqual(udic[0]['freq'], True) self.assertEqual(udic[1]['freq'], True) - self.assertEqual(udic[0]['size'], 512) - self.assertEqual(udic[1]['size'], 4096) + self.assertEqual(udic[0]['size'], 256) + self.assertEqual(udic[1]['size'], 513) def test_nmrglue_read_several(self): _______________________________________________ relax (http://www.nmr-relax.com) This is the relax-commits mailing list relax-commits@gna.org To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-commits