Author: bugman
Date: Tue Mar 10 10:05:25 2015
New Revision: 27800
URL: http://svn.gna.org/viewcvs/relax?rev=27800&view=rev
Log:
Fix for the lib.sequence.check_sequence checking object.
Although rarely used, the check for the spin number was incorrect and half of
the checks were
instead for the residue number. This is a classic copy and paste error where
the residue name and
number checks were copied but not completely converted to spin name and numbers.
Modified:
trunk/lib/sequence.py
Modified: trunk/lib/sequence.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/lib/sequence.py?rev=27800&r1=27799&r2=27800&view=diff
==============================================================================
--- trunk/lib/sequence.py (original)
+++ trunk/lib/sequence.py Tue Mar 10 10:05:25 2015
@@ -143,11 +143,11 @@
# Bad data in column.
try:
- res_num = eval(data[res_num_col-1])
- if not (res_num == None or isinstance(res_num, int)):
- return RelaxInvalidSeqError(data, "the spin number data '%s'
is invalid" % data[res_num_col-1])
+ spin_num = eval(data[spin_num_col-1])
+ if not (spin_num == None or isinstance(spin_num, int)):
+ return RelaxInvalidSeqError(data, "the spin number data '%s'
is invalid" % data[spin_num_col-1])
except:
- return RelaxInvalidSeqError(data, "the spin number data '%s' is
invalid" % data[res_num_col-1])
+ return RelaxInvalidSeqError(data, "the spin number data '%s' is
invalid" % data[spin_num_col-1])
# Spin name data.
if spin_name_col:
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