Hi, I have to warn you first that the 'tensor_pdb' branch is very unstable code at the moment and I'm constantly breaking things as the code shapes up. There may be times when it won't even run. These aren't related to this bug though.
I've had a look at the 'sconstruct' script in the base relax directory and one thing which is apparent is the '-dynamiclib' flag being passed into 'gcc'. The script has been specifically modified for OS X to compile the shared objects to be loaded by python, hence the '-bundle', etc. flags. However '-dynamiclib' is not one of the options in the script so it must be SCons adding that. If you type the following gcc line at the prompt, do get the same 'powerpc-apple-darwin8-gcc-4.0.1' error message or does the code compile? gcc -bundle -bundle_loader /sw/bin/python -dynamic -o maths_fns/relax_fit.dylib maths_fns/c_chi2.os maths_fns/exponential.os maths_fns/relax_fit.os If we can work out how to compile the C modules on the command line, then the SCons script can be subsequently updated to pass the correct options to gcc. Cheers, Edward On 11/8/06, anonymous <[EMAIL PROTECTED]> wrote:
URL: <http://gna.org/bugs/?7670> Summary: scons compile issue Project: relax Submitted by: None Submitted on: Wednesday 11/08/2006 at 13:52 CET Category: Scons build system Priority: 5 - Normal Severity: 4 - Important Status: None Privacy: Public Assigned to: None Originator Name: doug Originator Email: Open/Closed: Open Release: 1.2.7 Operating System: Mac OS X _______________________________________________________ Details: I'm using the tensor_pdb version (svn co svn://svn.gna.org/svn/relax/branches/tensor_pdb) and running Mac OS X 10.4.8 w/ gcc version 4.0.1 (PowerPC version). I tried to install relax using the directions in the relax.pdf section 1.2.1 using the 'scons' program under OS X. I am seeing the following error (even after trying to execute 'scons' a few times, which is shown below): % scons clean scons: Reading SConscript files ... scons: done reading SConscript files. scons: Building targets ... clean_temp_files(["clean_temp"], []) ############################### # Cleaning up temporary files # ############################### Removing the files ending in ['pyc', 'bak', 'o', 'os', 'obj', 'exp', 'lib']. clean_manual_files(["manual_clean"], []) ########################################## # Cleaning up the temporary manual files # ########################################## clean_files(["clean"], []) ############### # Cleaning up # ############### Removing the files ending in ['so', 'sconsign', 'dll']. scons: done building targets. % scons scons: Reading SConscript files ... scons: done reading SConscript files. scons: Building targets ... ########################### # Compiling the C modules # ########################### Building the relaxation curve fitting module 'maths_fns/relax_fit.dylib' gcc -I/sw/include/python2.4 -fPIC -c -o maths_fns/c_chi2.os maths_fns/c_chi2.c gcc -I/sw/include/python2.4 -fPIC -c -o maths_fns/exponential.os maths_fns/exponential.c gcc -I/sw/include/python2.4 -fPIC -c -o maths_fns/relax_fit.os maths_fns/relax_fit.c gcc -bundle -bundle_loader /sw/bin/python -dynamic -dynamiclib -o maths_fns/relax_fit.dylib maths_fns/c_chi2.os maths_fns/exponential.os maths_fns/relax_fit.os powerpc-apple-darwin8-gcc-4.0.1: -bundle not allowed with -dynamiclib scons: *** [maths_fns/relax_fit.dylib] Error 1 scons: building terminated because of errors. I blindly tried removing the -bundle and -bundle_loader flags, but that did not help. _______________________________________________________ Follow-up Comments: ------------------------------------------------------- Date: Wednesday 11/08/2006 at 13:52 CETBy: Anonymous I'm using the tensor_pdb version (svn co svn://svn.gna.org/svn/relax/branches/tensor_pdb) and running Mac OS X 10.4.8 w/ gcc version 4.0.1 (PowerPC version). I tried to install relax using the directions in the relax.pdf section 1.2.1 using the 'scons' program under OS X. I am seeing the following error (even after trying to execute 'scons' a few times, which is shown below): % scons clean scons: Reading SConscript files ... scons: done reading SConscript files. scons: Building targets ... clean_temp_files(["clean_temp"], []) ############################### # Cleaning up temporary files # ############################### Removing the files ending in ['pyc', 'bak', 'o', 'os', 'obj', 'exp', 'lib']. clean_manual_files(["manual_clean"], []) ########################################## # Cleaning up the temporary manual files # ########################################## clean_files(["clean"], []) ############### # Cleaning up # ############### Removing the files ending in ['so', 'sconsign', 'dll']. scons: done building targets. % scons scons: Reading SConscript files ... scons: done reading SConscript files. scons: Building targets ... ########################### # Compiling the C modules # ########################### Building the relaxation curve fitting module 'maths_fns/relax_fit.dylib' gcc -I/sw/include/python2.4 -fPIC -c -o maths_fns/c_chi2.os maths_fns/c_chi2.c gcc -I/sw/include/python2.4 -fPIC -c -o maths_fns/exponential.os maths_fns/exponential.c gcc -I/sw/include/python2.4 -fPIC -c -o maths_fns/relax_fit.os maths_fns/relax_fit.c gcc -bundle -bundle_loader /sw/bin/python -dynamic -dynamiclib -o maths_fns/relax_fit.dylib maths_fns/c_chi2.os maths_fns/exponential.os maths_fns/relax_fit.os powerpc-apple-darwin8-gcc-4.0.1: -bundle not allowed with -dynamiclib scons: *** [maths_fns/relax_fit.dylib] Error 1 scons: building terminated because of errors. I blindly tried removing the -bundle and -bundle_loader flags, but that did not help. _______________________________________________________ Reply to this item at: <http://gna.org/bugs/?7670> _______________________________________________ Message sent via/by Gna! http://gna.org/ _______________________________________________ relax (http://nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
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