URL:
<http://gna.org/bugs/?7891>
Summary: The heteronuc data structure does not exist after
reading reading model-free results files.
Project: relax
Submitted by: bugman
Submitted on: Thursday 11/30/2006 at 09:45
Category: relax's source code
Severity: 3 - Normal
Priority: 5 - Normal
Status: None
Privacy: Public
Assigned to: None
Originator Name:
Originator Email:
Open/Closed: Open
Discussion Lock: Any
Release: Repository: 1.2 line
Operating System: All systems
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Details:
When running the 'modsel.py' script with the data attached to bug #7755
(https://gna.org/bugs/?7755), I get the following error:
relax> results.write(run='aic', file='results', dir='aic', force=1,
format='columnar', compress_type=1)
Opening the file 'aic/results.bz2' for writing.
Traceback (most recent call last):
File "/mnt/removable/relax/relax-1.3/relax", line 454, in ?
Relax()
File "/mnt/removable/relax/relax-1.3/relax", line 166, in __init__
self.interpreter.run()
File "/mnt/removable/relax/relax-1.3/prompt/interpreter.py", line 216, in
run
run_script(intro=self.relax.intro_string, local=self.local,
script_file=self.relax.script_file, quit=1)
File "/mnt/removable/relax/relax-1.3/prompt/interpreter.py", line 391, in
run_script
console.interact(intro, local, script_file, quit)
File "/mnt/removable/relax/relax-1.3/prompt/interpreter.py", line 343, in
interact_script
execfile(script_file, local)
File "modsel.py", line 29, in ?
results.write(run='aic', file='results', force=1)
File "/mnt/removable/relax/relax-1.3/prompt/results.py", line 201, in
write
self.__relax__.generic.results.write(run=run, file=file, directory=dir,
force=force, format=format, compress_type=compress_type)
File "/mnt/removable/relax/relax-1.3/generic_fns/results.py", line 166, in
write
self.write_function(results_file, run)
File "/mnt/removable/relax/relax-1.3/specific_fns/model_free.py", line
4850, in write_columnar_results
self.write_columnar_line(file=file, num=data.num, name=data.name,
select=data.select, data_set='value', nucleus=nucleus, model=model,
equation=equation, params=params, param_set=self.param_set, s2=s2, s2f=s2f,
s2s=s2s, local_tm=local_tm, te=te, tf=tf, ts=ts, rex=rex, r=r, csa=csa,
chi2=chi2, i=iter, f=f, g=g, h=h, warn=warn, diff_type=diff_type,
diff_params=diff_params, pdb=pdb, pdb_model=pdb_model,
pdb_heteronuc=data.heteronuc, pdb_proton=data.proton, xh_vect=xh_vect,
ri_labels=ri_labels, remap_table=remap_table, frq_labels=frq_labels, frq=frq,
ri=ri, ri_error=ri_error)
AttributeError: Element instance has no attribute 'heteronuc'
_______________________________________________________
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<http://gna.org/bugs/?7891>
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