On 3/29/07, Gary S. Thompson <[EMAIL PROTECTED]> wrote:
Edward d'Auvergne wrote:
[snip]
> One > question I have is will there be a separate model-free minimise() > function for normal and MPI operation? no the non mpi version just calls the uniprocessor processor multi.uni_processor. The current uniprocessor implimentation is non optimal by space on single processor machines but will have the same overhead by time as any other implimentations (barring the use of command cacheing which may save to object creation overhead) > Another point is that I can't > run the code in the branch without having MPI up and running. > > you should be able to run relax without a --multi command line and without an mpirun and the uniprocessor implimentations should run. However, currently when I run it I get The dependency 'mpi4py' has not been installed is that the problem you have?? I will investigate the problem
correction I have just gone home and run the command on the same machine remotely and get no messages about dependencies!. if this is the error you get please tell me. Ah revelation (realtime messaging and debugging!) in uni_processor I am using multi.mpi4py_processor.Result_command which will load the mpi4py_processor module which will result in load of mpi4py (lines 14 onwards in mpi4py_processor). This is just an oversight due to me being lazy and winging it while testing corrections on the way ;-) regards gary
>> obviously there is consdiderable code cleanup and documentation still >> to be done and also implimentation of processors for threading and >> ssh tunnels > > > The code is shaping up nicely. With a good clean up it should be > relatively easy to port to the 1.3 line later on. yep time to go from alpha to beta, glad you like it > 1It looks like a > great framework for the threading and grid computing via ssh tunnels. > indeed thats the intention and design goal ;-) > Cheers, > > Edward > regards gary > _______________________________________________ > relax (http://nmr-relax.com) > > This is the relax-devel mailing list > [email protected] > > To unsubscribe from this list, get a password > reminder, or change your subscription options, > visit the list information page at > https://mail.gna.org/listinfo/relax-devel > > . > -- ------------------------------------------------------------------- Dr Gary Thompson Astbury Centre for Structural Molecular Biology, University of Leeds, Astbury Building, Leeds, LS2 9JT, West-Yorkshire, UK Tel. +44-113-3433024 email: [EMAIL PROTECTED] Fax +44-113-2331407 ------------------------------------------------------------------- _______________________________________________ relax (http://nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
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