Hi, That quickly fixed that system test! As for reading differently named protons and nitrogens, multiple calls to spectrum.read_intensities() changing the proton and heteronucleus names each time is necessary. This allows a 'HN-N' and a 'HE1 - NE1' intensity to be loaded into different nitrogen spins for the same residue.
Regards, Edward On Mon, Dec 1, 2008 at 8:23 PM, <[EMAIL PROTECTED]> wrote: > Author: semor > Date: Mon Dec 1 20:23:44 2008 > New Revision: 8090 > > URL: http://svn.gna.org/viewcvs/relax?rev=8090&view=rev > Log: > Continued to add tests for the reading of an XEasy peak list. > > Commented lines (154, 159, 162) refer to spins different than standard > backbone amides (HN - N), > i.e. HE1 - NE1 > HN - C > HE1 - C > > Not sure yet how to implement the reading of these... > > > Modified: > branches/spectral_errors/test_suite/system_tests/peak_lists.py > > Modified: branches/spectral_errors/test_suite/system_tests/peak_lists.py > URL: > http://svn.gna.org/viewcvs/relax/branches/spectral_errors/test_suite/system_tests/peak_lists.py?rev=8090&r1=8089&r2=8090&view=diff > ============================================================================== > --- branches/spectral_errors/test_suite/system_tests/peak_lists.py (original) > +++ branches/spectral_errors/test_suite/system_tests/peak_lists.py Mon Dec 1 > 20:23:44 2008 > @@ -151,4 +151,17 @@ > self.assertEqual(cdp.mol[0].res[5].spin[0].intensities[0], 9.305e+03) > self.assertEqual(cdp.mol[0].res[6].spin[0].intensities[0], 3.154e+04) > self.assertEqual(cdp.mol[0].res[7].spin[0].intensities[0], 9.180e+03) > - self.assertEqual(cdp.mol[0].res[8].spin[0].intensities[0], 1.532e+04) > + #self.assertEqual(cdp.mol[0].res[8].spin[0].intensities[0], > 1.532e+04) > + self.assertEqual(cdp.mol[0].res[9].spin[0].intensities[0], 1.104e+04) > + self.assertEqual(cdp.mol[0].res[10].spin[0].intensities[0], > 7.680e+03) > + self.assertEqual(cdp.mol[0].res[11].spin[0].intensities[0], > 5.206e+03) > + self.assertEqual(cdp.mol[0].res[12].spin[0].intensities[0], > 2.863e+04) > + #self.assertEqual(cdp.mol[0].res[13].spin[0].intensities[0], > 6.877e+03) > + self.assertEqual(cdp.mol[0].res[14].spin[0].intensities[0], > 9.271e+03) > + self.assertEqual(cdp.mol[0].res[15].spin[0].intensities[0], > 7.919e+03) > + #self.assertEqual(cdp.mol[0].res[15].spin[1].intensities[0], > 7.123e+03) > + self.assertEqual(cdp.mol[0].res[16].spin[0].intensities[0], > 9.962e+03) > + self.assertEqual(cdp.mol[0].res[17].spin[0].intensities[0], > 1.260e+04) > + self.assertEqual(cdp.mol[0].res[18].spin[0].intensities[0], > 1.545e+04) > + self.assertEqual(cdp.mol[0].res[19].spin[0].intensities[0], > 1.963e+04) > + self.assertEqual(cdp.mol[0].res[20].spin[0].intensities[0], > 1.918e+04) > > > _______________________________________________ > relax (http://nmr-relax.com) > > This is the relax-commits mailing list > [EMAIL PROTECTED] > > To unsubscribe from this list, get a password > reminder, or change your subscription options, > visit the list information page at > https://mail.gna.org/listinfo/relax-commits > _______________________________________________ relax (http://nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
