Hi That sounds straight forward. But how can I start creating a task and branch?
Cheers Michael Am 06.10.2010 03:55, schrieb Edward d'Auvergne: > Hi, > > I would suggest first creating a task for this, and attaching an > example file to import. The implementation steps would then be as > follows: > > 1) Create a branch from the 1.3 line for the implementation. > > 2) Add the file (truncated) to the relax test suite data store. > > 3) Write a system test for reading this file. This would be > essentially a script that is run, and the contents of the relax data > store can then be checked. > > 4) Implement the user function prompt interface (easy part). > > 5) Implement the back end in generic_fns.spectra. This will be > complete once the system test passes. > > 6) Implementation of the GUI front end. > > > The hard part would be 5), as this does all the work. It needs to > integrate with and sit along side the other readers behind > spectrum.read_intensities(), using the autodetect_format() function, > and be implemented in the function intensity_bruker(). I have already > written all the infrastructure for supporting this, so it shouldn't be > a too difficult task. The prompt/script user function and GUI setup > would be a very transparent interface to the underlying generic_fns > library. The system test will ensure that this works until eternity > :) > > Regards, > > Edward > > > > On 30 September 2010 07:11, Michael Bieri<[email protected]> wrote: > >> Hi Edward >> >> I got some export files from the Bruker Protein Dynamic Center and I am >> wondering how we should design the import. >> >> The files consist of everything we will need (sequence, type, field >> strength, assignments, intensities, R1/R2/Noe). >> >> I can start coding import in the GUI; basically extract the data and >> create dummy-peak lists. Then, everything works as usual. Do you have >> any preference about the prompt import or should we just use the same >> (just a command like 'bruk.import(file)') ? >> >> We don't have to care about the spin systems, as it is originating from >> protein dynamic center, which means that there will only be protein data. >> >> I will upload the files once we have a concept. >> >> Cheers >> Michael >> >> _______________________________________________ >> relax (http://nmr-relax.com) >> >> This is the relax-devel mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-devel >> >> > > _______________________________________________ relax (http://nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
