URL:
<http://gna.org/bugs/?17417>
Summary: Failure of loading a relax 1.2 file - "TypeError:
'NoneType' object is not iterable"
Project: relax
Submitted by: bugman
Submitted on: Mon 03 Jan 2011 09:32:00 AM GMT
Category: relax's source code
Severity: 3 - Normal
Priority: 5 - Normal
Status: None
Privacy: Public
Assigned to: bugman
Originator Name:
Originator Email:
Open/Closed: Open
Discussion Lock: Any
Release: 1.3.6
Operating System: All systems
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Details:
= Description =
Loading of a relax 1.2 file fails when trying to set up a model-free model
which is set to None in the results file.
= The error message =
Opening the file
'/data/relax/relax-1.3/test_suite/shared_data/model_free/tem1_trunc.bz2' for
reading.
relax 1.2 model-free results file.
Generating the sequence.
Setting the diffusion tensor.
Diffusion type: ellipsoid
RelaxWarning: The PDB file 1XPB_good_numbering_with_protons_NO_PLUS.pdb.pdb
cannot be found, no structures will be loaded.
Traceback (most recent call last):
File "test_suite/system_tests/model_free.py", line 1620, in
test_read_results_1_2_tem1
self.interpreter.results.read(file='tem1_trunc',
dir=__main__.install_path +
sep+'test_suite'+sep+'shared_data'+sep+'model_free')
File "prompt/results.py", line 88, in read
results.read(file=file, directory=dir)
File "generic_fns/results.py", line 113, in read
read_function(file_data)
File "specific_fns/model_free/results.py", line 1089, in
read_columnar_results
self._read_1_2_results(file_data, verbosity)
File "specific_fns/model_free/results.py", line 736, in _read_1_2_results
self._load_model_free_data(file_line, col, data_set, spin, spin_id,
verbosity)
File "specific_fns/model_free/results.py", line 247, in
_load_model_free_data
self._model_setup(model=model, equation=equation, params=params,
spin_id=spin_id)
File "specific_fns/model_free/main.py", line 784, in _model_setup
for param in params:
TypeError: 'NoneType' object is not iterable
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