Dear Luca, It is strange that this machine is failing. I compiled these modules on a virtual machine using an i686 version of Mandriva using similar specifications. Maybe I'll need to install a minimal version of 32-bit Lucid into a VM for testing the next relax release. As for needing the curve-fitting, that is dependent on how relax is going to be used. In general if relaxation data is being collected, than it will be required. The process is quite simple for Lucid though:
$ sudo apt-get install python2.6-dev $ scons This should hopefully be sufficient. Cheers, Edward On 13 July 2011 15:10, Leone, Luca <[email protected]> wrote: > Edward > Thank you for your response. I did the scons clean_all and that worked. I > was able to do the relax --info and I am going to paste it in this email. > Do the curve fitting module need to be recompiled? > > Thank you > Luca > > relax 1.3.10 > > Molecular dynamics by NMR data analysis > > Copyright (C) 2001-2006 Edward d'Auvergne > Copyright (C) 2006-2011 the relax development team > > This is free software which you are welcome to modify and redistribute under > the conditions of the > GNU General Public License (GPL). This program, including all modules, is > licensed under the GPL > and comes with absolutely no warranty. For details type 'GPL' within the > relax prompt. > > Assistance in using the relax prompt and scripting interface can be accessed > by typing 'help' within > the prompt. > > ImportError: relaxation curve fitting is unavailable, the corresponding C > modules have not been compiled. > > Hardware information: > Machine: i686 > Processor: > > System information: > System: Linux > Release: 2.6.32-33-generic > Version: #70-Ubuntu SMP Thu Jul 7 21:09:46 UTC 2011 > GNU/Linux version: Ubuntu 10.04 lucid > Distribution: Ubuntu 10.04 lucid > Full platform string: > Linux-2.6.32-33-generic-i686-with-Ubuntu-10.04-lucid > > Software information: > Architecture: 32bit ELF > Python version: 2.6.5 > Python branch: tags/r265 > Python build: r265:79063, Apr 16 2010 13:09:56 > Python compiler: GCC 4.4.3 > Python implementation: CPython > Python revision: 79063 > Numpy version: 1.3.0 > Libc version: glibc 2.4 > > Python packages (most are optional): > > Package Installed Version Path > minfx True Unknown /usr/local/relax/minfx > bmrblib False > numpy True 1.3.0 > /usr/lib/python2.6/dist-packages/numpy > ScientificPython False > wxPython True > mpi4py False > epydoc False > optparse True 1.5.3 > /usr/lib/python2.6/optparse.pyc > Numeric False > readline True > /usr/lib/python2.6/lib-dynload/readline.so > profile True > /usr/lib/python2.6/profile.pyc > bz2 True > /usr/lib/python2.6/lib-dynload/bz2.so > gzip True > /usr/lib/python2.6/gzip.pyc > os.devnull True /usr/lib/python2.6/os.pyc > > Compiled relax C modules: > Relaxation curve fitting: False > > Luca Leone > BMP Network Administrator > Department of Biochemistry & Molecular Pharmacology > University of Massachusetts Medical School > (508) 856-8301 phone > (508) 335-5335 cell > [email protected] > ________________________________________ > From: Edward d'Auvergne [[email protected]] > Sent: Tuesday, July 12, 2011 5:05 PM > To: Luca Leone > Cc: Leone, Luca; [email protected] > Subject: Re: [sr #2770] relax setup issue > > Dear Luca Leone, > > Welcome to the relax mailing lists. Would you be able to add the output of: > > $ relax --info > > to your support request (http://gna.org/support/?2770)? Cheers. This > additional information will help to work out what the issue could be. > It is most likely to be the compiled C modules. If that command does > not work, try typing: > > $ scons clean_all > $ relax > > and see if that works. This command is dangerous as it will delete > the relaxation curve-fitting compiled C module located at > maths_fns/relax_fit.so (if scons is not installed, just manually > delete that file). If you need this curve-fitting, then you'll need > to compile this module. For this there are instructions at > http://www.nmr-relax.com/download.html#Source_code_release (you'll > need the python development files installed, a C compiler, and scons). > Alternatively the problem could be with one of the python packages > installed on your computer, but it's better to assume the relax C > modules are at fault first. I hope this helps. > > Regards, > > Edward > > > On 12 July 2011 21:30, Luca Leone <[email protected]> wrote: >> >> URL: >> <http://gna.org/support/?2770> >> >> Summary: relax setup issue >> Project: relax >> Submitted by: leone76 >> Submitted on: Tue 12 Jul 2011 07:30:46 PM GMT >> Category: None >> Priority: 5 - Normal >> Severity: 4 - Important >> Status: None >> Privacy: Public >> Assigned to: None >> Originator Email: >> Open/Closed: Open >> Discussion Lock: Any >> Operating System: GNU/Linux >> >> _______________________________________________________ >> >> Details: >> >> To whom it may concern >> I am trying to install relax on ubuntu 11 and when I try to run the test I >> get an error "Segmentation Fault" I would appreciate any help. >> Thank you >> >> >> >> >> >> _______________________________________________________ >> >> Reply to this item at: >> >> <http://gna.org/support/?2770> >> >> _______________________________________________ >> Message sent via/by Gna! >> http://gna.org/ >> >> >> _______________________________________________ >> relax (http://nmr-relax.com) >> >> This is the relax-devel mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-devel >> > > > _______________________________________________ relax (http://nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
