SeriesTab can be used for single files, if the keyword -list list_of_files.txt only contains one file.
Then the intensity will be read from column 6. This is FINE for the GUI. But, if you provide it a list of several files, they will be compared, to 5 digits. This is a nice feature, since you now have a matrix possibility. Say that you have a dispersion experiment and record 20 interleaved spectra. Then you change a parameter somewhere, and have 20 new files. And repeat. All this can be contained in one big file. So, you want to create a python file, which go through the list file, and takes Col[line_number +7] * Col[5] And then you have the name for the spectrum from the list file. Sooooo..... I would need this feature! Troels Emtekær Linnet 2013/6/21 Edward d'Auvergne <[email protected]> > Hi, > > For this one I would prefer not to apply the patch. I think there are > already too many keyword arguments for the spectrum.read user function > and the GUI interface for it will be too crowded. And as I mentioned > at: > > http://thread.gmane.org/gmane.science.nmr.relax.devel/3963/focus=4066 > > we should be able to determine the scaling column from the *.ser file. > What do you think? > > Regards, > > Edward > > > > On 21 June 2013 20:04, Troels E. Linnet > <[email protected]> wrote: > > Follow-up Comment #26, sr #3043 (project relax): > > > > Intensity column keyword added for NMRPipe SeriesTab format. > > > > Progress sr #3043: (https://gna.org/support/index.php?3043) Support for > > NMRPipe seriesTab format *.ser > > > > Added the keyword "col_mult": > > """ The column which to multiply the peak intensity data (used by the > > SeriesTab intensity file format). """ > > If the file 'allplanes.list' contains several paths to .ft2 files, the > call > > to: > > seriesTab -in peaks.dat -out allplanes.ser -list allplanes.list > > will give a result file where the the total intensity will be given by > column: > > VOL x Z_A0 etc. > > > > The result file contain the VARS keyword: > > INDEX X_AXIS Y_AXIS X_PPM Y_PPM VOL ASS Z_A0 Z_A1 Z_A2 Z_A3 > > Where Z_A0 Z_A1 Z_A2 Z_A3 matches allplanes.list > > > > An 'allplanes.list' is easily created by: > >> ls -v -d -1 /.ft2 > allplanes.list > > > > > > (file #18152) > > _______________________________________________________ > > > > Additional Item Attachment: > > > > File name: trunk_SeriesTab4_2 Size:1 KB > > > > > > _______________________________________________________ > > > > Reply to this item at: > > > > <http://gna.org/support/?3043> > > > > _______________________________________________ > > Message sent via/by Gna! > > http://gna.org/ > > > > > > _______________________________________________ > > relax (http://www.nmr-relax.com) > > > > This is the relax-devel mailing list > > [email protected] > > > > To unsubscribe from this list, get a password > > reminder, or change your subscription options, > > visit the list information page at > > https://mail.gna.org/listinfo/relax-devel >
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