URL: <http://gna.org/bugs/?24131>
Summary: BMRB export fails with 'SpinContainer' object has no attribute 's2' Project: relax Submitted by: mab Submitted on: Mon 30 Nov 2015 02:37:31 PM UTC Category: relax's source code Specific analysis category: None Priority: 5 - Normal Severity: 4 - Important Status: None Assigned to: None Originator Name: Originator Email: Open/Closed: Open Release: 4.0.0 Discussion Lock: Any Operating System: Mac OS X (Intel) _______________________________________________________ Details: Hi Edward, after the final run of the d'Auvergne protocol, relax writes a results.bz2 file, containing all the relaxation rates and model-free data etc of the current run. To export to a NMRstar file, one needs to set up spin.isotope, spin.element (which apparently are not preserved from the original final run), relax_data.temp_calibration, relax_data.temp_control, molecule.type and bmrb.thiol_state. But then, a bmrb.write(file="test.str", dir=None, version='3.1', force=True) results in: AttributeError: 'SpinContainer' object has no attribute 's2' How can I setup that the s2 and the other model-free parameters are written out into the BMRBstar file along with the relaxation data? I can't provide a truncated results file (because I don't know how to truncate it) and don't want to publish the results here. So the full results file is available on request … Cheers, Martin _______________________________________________________ File Attachments: ------------------------------------------------------- Date: Mon 30 Nov 2015 02:37:31 PM UTC Name: relax_output.txt Size: 11kB By: mab <http://gna.org/bugs/download.php?file_id=25869> _______________________________________________________ Reply to this item at: <http://gna.org/bugs/?24131> _______________________________________________ Message sent via/by Gna! http://gna.org/ _______________________________________________ relax (http://www.nmr-relax.com) This is the relax-devel mailing list relax-devel@gna.org To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel