I think the problem may be that not enough iterations of the sphere, prolate and oblate spheroids, and the ellipsoid have been carried out. To run the script, one iteration with self.diff_model='local_tm' is initially required. Then for the sphere, you will need to run the script numerous times (maybe 5 or more iterations) until the script converges. I would recommend using relax-1.2.10 as the full analysis script will tell you when convergence has occurred. Multiple iterations of the prolate spheroid, oblate spheroid, and ellipsoid are separately required (possibly running the script between 10 and 15 time). Once each of these four diffusion models have converged, then the final run is executed. I hope this helps.
Regards, Edward On Tue, 2007-05-08 at 12:50 +0800, Hongyan Li wrote: > Dear Edward, > I have set sel.diff_model=local_tm, sphere, prolate, oblate and ellipsoid and > run full_analysis.py each time to generate directory and init in each model > and > then set sel.diff_model=final to run the script again. RelaxError: No > diffusion > tensor data is loaded for the run 'final' appears and please see the attached > file for the information appeared on the screen. > Best regards, > Hongyan > > Quoting Edward d'Auvergne <[EMAIL PROTECTED]>: > > > Hi, > > > > Unfortunately I cannot determine what the problem is with this > > information. Would you be able to include a few more details > > including what you had run prior to this error occurring. Maybe a > > number of lines printed from relax would help as well. Also if you > > run relax with the '--debug' command line argument, more information > > about the error will be printed and hopefully a save file which can be > > attached to a bug report (https://gna.org/bugs/?group=relax) along > > with the script. Any additional information would be appreciated. > > Even a recursive file and directory listing could be useful in pinning > > down the problem. > > > > Cheers, > > > > Edward > > > > > > > > On 5/4/07, Hongyan Li <[EMAIL PROTECTED]> wrote: > > > Dear relax users, > > > when I run full-analysis.py script, I got the error message (no diffusion > > tensor > > > data is loaded for the run 'tensor'). I am not sure how to set tensor, > > > does > > the > > > program automatically generate tensor from pdb files? > > > > > > Any suggestion will be highly appreciated! > > > > > > best regards, > > > Hongyan > > > > > > Dr. Hongyan Li > > > Department of Chemistry > > > The University of Hong Kong > > > Pokfulam Road > > > Hong Kong > > > > > > > > > _______________________________________________ > > > relax (http://nmr-relax.com) > > > > > > This is the relax-users mailing list > > > [email protected] > > > > > > To unsubscribe from this list, get a password > > > reminder, or change your subscription options, > > > visit the list information page at > > > https://mail.gna.org/listinfo/relax-users > > > > > > > > Dr. Hongyan Li > Department of Chemistry > The University of Hong Kong > Pokfulam Road > Hong Kong _______________________________________________ relax (http://nmr-relax.com) This is the relax-users mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users
