Hi, 2009/12/4 Tiago Pais <[email protected]>: > Hi, > I am not really sure if I understand what you mean by a "corrupted PDB > issue"?
This just means a file that does not conform to the PDB standards (many do not but are nevertheless not too corrupted to read). This I can easily check if you create a bug report and attach a fragment of the file. > The PDB that I am using was created with MolMol (Version 2K.2 - old version > probably) from an original PDB that was deposited at the Protein data bank > server, which indeed does not have the CONECT lines. I used MolMol because I > needed to add the hydrogen atoms to the structure. Probably some other > programs do not introduce the CONECT lines...?! Do you think MolMol is > actually "corrupting" the PDB during the process of H addition? Molmol will delete all CONECT records from a PDB file you open, and you then have to calculate bonds to get them back. In the file output by Molmol, are the CONECT records in there? Cheers, Edward _______________________________________________ relax (http://nmr-relax.com) This is the relax-users mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users
