Hi, It shouldn't be a problem at all. I have no idea what the bx means then either, it's strange that they put that there. I hope it really is a hight integration that it's doing :S Well, if you have all spectra duplicated, then you will be able to have an error estimate per spectrum. For a sanity check, this should be similar to the value of the RMSD of the baseplane noise in each spectra.
Regards, Edward On 20 December 2010 14:47, M Strickland, Science 04 <[email protected]> wrote: > I don't know what the bx means, I've been removing it in my final files. > Analysis just gives the option between height and intensity and I pick > height. Unfortunately, I don't know how they measure it, but I generally > get duplicate spectra for all my results, and at two field strengths, so it > shouldn't be an issue for my calculations? > > ---------- Forwarded Message ---------- > Date: 17 December 2010 20:33 +0100 > From: Edward d'Auvergne <[email protected]> > To: > Cc: [email protected], [email protected] > Subject: Re: [bug #17341] Compatibility with CCPN Analysis2.1 > > Hi Maddy, > > I'm in the process of adding this data to the relax test suite, and > noticed that the integrated values have 'bx' after it. Would you know > what that is? Are you using box integration, or measuring peak > heights? Can CCPN Analysis measure peak heights? If you are using > box integration without duplicate spectra, this significantly > complicates the analysis as you will need to know the exact number of > points used in each box. Peak heights are a much better way of > determining the peak intensities as one advantage is that the errors > are much easier to ascertain. > > Regards, > > Edward > > > > On 17 December 2010 16:48, anonymous <[email protected]> > wrote: >> >> URL: >> <http://gna.org/bugs/?17341> >> >> Summary: Compatibility with CCPN Analysis2.1 >> Project: relax >> Submitted by: None >> Submitted on: Fri 17 Dec 2010 03:48:15 PM UTC >> Category: relax's source code >> Severity: 2 - Minor >> Priority: 5 - Normal >> Status: None >> Privacy: Public >> Assigned to: None >> Originator Name: Madeleine Strickland >> Originator Email: [email protected] >> Open/Closed: Open >> Discussion Lock: Any >> Release: 1.3.5 >> Operating System: GNU/Linux >> >> _______________________________________________________ >> >> Details: >> >> When using FormatConverter (with CCPN Analysis2.1) you can output 'Sparky' >> format peak lists for use with curve fitting in Relax. These have a >> different format to those expected by Relax1.3.5. Differences are: >> >> Relax: Two header lines, Analysis: One header line >> Relax: V1504N-HN, Analysis: V1504N-V1504HN >> Relax: Peaks in order, Analysis: Random order of peaks >> >> Attached: R1.py script, lists for two residues, log file of output from >> Relax, sequence >> >> >> >> >> >> _______________________________________________________ >> >> File Attachments: >> >> >> ------------------------------------------------------- >> Date: Fri 17 Dec 2010 03:48:15 PM UTC Name: log.txt Size: 24kB By: >> None >> >> <http://gna.org/bugs/download.php?file_id=11610> >> ------------------------------------------------------- >> Date: Fri 17 Dec 2010 03:48:15 PM UTC Name: peak_lists.tar.gz Size: 645B >> By: None >> >> <http://gna.org/bugs/download.php?file_id=11611> >> ------------------------------------------------------- >> Date: Fri 17 Dec 2010 03:48:15 PM UTC Name: R1A.py Size: 4kB By: None >> >> <http://gna.org/bugs/download.php?file_id=11612> >> ------------------------------------------------------- >> Date: Fri 17 Dec 2010 03:48:15 PM UTC Name: sequence.out Size: 44B By: >> None >> >> <http://gna.org/bugs/download.php?file_id=11613> >> >> _______________________________________________________ >> >> Reply to this item at: >> >> <http://gna.org/bugs/?17341> >> >> _______________________________________________ >> Message sent via/by Gna! >> http://gna.org/ >> >> >> _______________________________________________ >> relax (http://nmr-relax.com) >> >> This is the relax-devel mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-devel >> > > ---------- End Forwarded Message ---------- > > > > ---------------------- > M Strickland, Science 04 > [email protected] > > _______________________________________________ > relax (http://nmr-relax.com) > > This is the relax-users mailing list > [email protected] > > To unsubscribe from this list, get a password > reminder, or change your subscription options, > visit the list information page at > https://mail.gna.org/listinfo/relax-users > _______________________________________________ relax (http://nmr-relax.com) This is the relax-users mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users
