Dear Shantanu, Sorry for not responding earlier, but I was on holidays until today. It is good that you have found the issue. Thank you Tiago for helping. The python-profiler should not be necessary as I have made this an optional package. The profile module is only used by developers to work out which parts of relax are slowing down the calculations, and is useful for large scale speeding up of the program. If you have any other issues, please don't hesitate to ask about it here. I should now be able to respond quicker. And other relax users are likely to have encountered the same problems you do and will be able to tell you about their solutions.
Cheers, Edward On 5 May 2011 18:44, Shantanu S. Bhattacharyya Mr <[email protected]> wrote: > Hi, > > I just solved the problem. I needed to install two more python packages > 1. python-devel & 2. python-profiler > from the ubuntu repositories. I think other OS will also have something > similar which can solve the problem. > > Thanks a lot, > Shantanu S. Bhattacharyya > > > > On Thu, May 5, 2011 12:00 pm, Shantanu S. Bhattacharyya Mr wrote: >> Hi, >> >> >> I tried the relax-nmr versions 1.3.9/8/7. All three give the same error >> when I try to compile the code >> >> scons: Reading SConscript files ... >> scons: done reading SConscript files. >> scons: Building targets ... >> >> >> ########################### >> # Compiling the C modules # >> ########################### >> >> >> >> Building the relaxation curve fitting module 'maths_fns/relax_fit.so' >> >> >> gcc -o maths_fns/c_chi2.os -c -I/usr/include/python2.6 >> -I/usr/lib/python2.6/dist-packages/numpy/core/include -fPIC >> maths_fns/c_chi2.c gcc -o maths_fns/exponential.os -c >> -I/usr/include/python2.6 >> -I/usr/lib/python2.6/dist-packages/numpy/core/include -fPIC >> maths_fns/exponential.c maths_fns/exponential.c:23: fatal error: Python.h: >> No such file or directory >> compilation terminated. scons: *** [maths_fns/exponential.os] Error 1 >> scons: building terminated because of errors. >> >> >> >> >> On Thu, May 5, 2011 4:56 am, tpais wrote: >> >>> Hi, >>> i get the same problem and i have several versions of relax installed >>> and running properly. For me, the problem was solved by getting the >>> repository version. Hope it works for you. TiagoP >>> >>> >>> >>> On Wed, 4 May 2011 18:36:12 -0400, Shantanu S. Bhattacharyya Mr wrote: >>> >>> >>>> Hello, >>>> >>>> >>>> >>>> I am trying to run relax-1.3.10 on ubuntu 10.10. I am using the KDE >>>> and root enabled. >>>> >>>> I unpacked and decompressed the package in /usr/local, >>>> created a symbolic link in /usr/local/bin by typing ln -s >>>> ../relax-1.3.10/relax . >>>> and then ran relax by typing relax -test >>>> >>>> I got Segmentation fault >>>> >>>> >>>> >>>> I also tried going to the base directory relax-1.3.10 and typing >>>> scons -install. >>>> >>>> >>>> I get >>>> >>>> >>>> >>>> scons: Reading SConscript files ... >>>> scons: done reading SConscript files. >>>> scons: Building targets ... >>>> install(["install"], []) >>>> >>>> #################### >>>> # Installing relax # >>>> #################### >>>> >>>> >>>> >>>> >>>> Installing the program relax into the directory '/usr/local/relax' >>>> >>>> >>>> >>>> >>>> >>>> Copying all files in '/usr/local/relax-1.3.10' to '/usr/local/relax'. >>>> >>>> >>>> >>>> Creating the symbolic link from '/usr/local/relax/relax' to >>>> '/usr/local/bin/relax'. >>>> >>>> >>>> >>>> Running relax to create the byte-compiled *.pyc files. >>>> Segmentation fault >>>> >>>> >>>> >>>> scons: done building targets. >>>> >>>> >>>> >>>> I tried compiling from the source code as well. I extracted the >>>> relax-1.3.10.src.tar.bz2 package and from the base relax directory >>>> typed scons >>>> >>>> I get >>>> >>>> >>>> >>>> scons: Reading SConscript files ... >>>> scons: done reading SConscript files. >>>> scons: Building targets ... >>>> >>>> >>>> >>>> >>>> >>>> >>>> ########################### >>>> # Compiling the C modules # >>>> ########################### >>>> >>>> >>>> >>>> >>>> Building the relaxation curve fitting module 'maths_fns/relax_fit.so' >>>> >>>> >>>> >>>> gcc -o maths_fns/c_chi2.os -c -I/usr/include/python2.6 >>>> -I/usr/lib/python2.6/dist-packages/numpy/core/include -fPIC >>>> maths_fns/c_chi2.c gcc -o maths_fns/exponential.os -c >>>> -I/usr/include/python2.6 >>>> -I/usr/lib/python2.6/dist-packages/numpy/core/include -fPIC >>>> maths_fns/exponential.c maths_fns/exponential.c:23: fatal error: >>>> Python.h: No such file or >>>> directory compilation terminated. scons: *** >>>> [maths_fns/exponential.os] >>>> Error 1 >>>> scons: building terminated because of errors. >>>> >>>> >>>> >>>> >>>> How should I proceed from here ?? >>>> >>>> >>>> >>>> Thanks a lot, >>>> Shantanu S. Bhattacharyya >>>> -- >>>> Shantanu S. Bhattacharyya >>>> Grad Student, Biological Sciences >>>> Carnegie Mellon University >>>> url : http://esesbee.com >>>> >>>> >>>> _______________________________________________ >>>> relax (http://nmr-relax.com) >>>> >>>> This is the relax-users mailing list >>>> [email protected] >>>> >>>> To unsubscribe from this list, get a password >>>> reminder, or change your subscription options, visit the list >>>> information page at https://mail.gna.org/listinfo/relax-users >>>> >>> >>> >>> _______________________________________________ >>> relax (http://nmr-relax.com) >>> >>> This is the relax-users mailing list >>> [email protected] >>> >>> To unsubscribe from this list, get a password >>> reminder, or change your subscription options, visit the list >>> information page at https://mail.gna.org/listinfo/relax-users >>> >>> >>> >> >> >> -- >> Shantanu S. Bhattacharyya >> Grad Student, Biological Sciences >> Carnegie Mellon University >> url : http://esesbee.com >> >> >> _______________________________________________ >> relax (http://nmr-relax.com) >> >> This is the relax-users mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, visit the list information >> page at https://mail.gna.org/listinfo/relax-users >> >> >> > > > -- > Shantanu S. Bhattacharyya > Grad Student, Biological Sciences > Carnegie Mellon University > url : http://esesbee.com > > > _______________________________________________ > relax (http://nmr-relax.com) > > This is the relax-users mailing list > [email protected] > > To unsubscribe from this list, get a password > reminder, or change your subscription options, > visit the list information page at > https://mail.gna.org/listinfo/relax-users > _______________________________________________ relax (http://nmr-relax.com) This is the relax-users mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users
