Hi again
I just found the directory of you execution. it seems as you wanted to
extract local tm data. You will also have to deactivate diffusion tensor
code, as the local tm model has no diffusion tensor.
Cheers
Michael
Am 24.05.2011 02:23, schrieb Deshmukh, Lalit (NIH/NIDDK) [F]:
Hi,
I am having some trouble with final_data_extraction.py script. Here is the
error.
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
relax> results.read(file='results', dir=None)
Opening the file 'results.bz2' for reading.
Traceback (most recent call last):
File "/usr/local/bin/relax", line 381, in<module>
Relax()
File "/usr/local/bin/relax", line 117, in __init__
self.interpreter.run(self.script_file)
File "/usr/local/relax-1.3.10/prompt/interpreter.py", line 294, in run
return run_script(intro=self.__intro_string, local=locals(),
script_file=script_file, quit=self.__quit_flag, show_script=self.__show_script,
raise_relax_error=self.__raise_relax_error)
File "/usr/local/relax-1.3.10/prompt/interpreter.py", line 597, in run_script
return console.interact(intro, local, script_file, quit,
show_script=show_script, raise_relax_error=raise_relax_error)
File "/usr/local/relax-1.3.10/prompt/interpreter.py", line 483, in
interact_script
exec_script(script_file, local)
File "/usr/local/relax-1.3.10/prompt/interpreter.py", line 376, in
exec_script
runpy.run_module(module, globals)
File "/usr/lib/python2.6/runpy.py", line 140, in run_module
fname, loader, pkg_name)
File "/usr/lib/python2.6/runpy.py", line 34, in _run_code
exec code in run_globals
File
"/u/deshmukhl/Capsid/T1T1p_NOE/Relax/Calc/local_tm/aic/final_data_extraction.py",
line 36, in<module>
spin_no = spin_id[spin_id.index(':')+1:spin_id.index('&')]
ValueError: substring not found
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Thanks in advance,
Regards,
Lalit
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