Hi Edward, I did try updating it using the svn command but it did not solve the issue. I probably need to wait for the newer version. When are you going to release that.
regards ravi On Wed, Jul 2, 2014 at 12:29 AM, Edward d'Auvergne <edw...@nmr-relax.com> wrote: > Hi, > > For reference, the bug report is at > https://gna.org/bugs/index.php?22257. I have now fixed the problem in > the relax trunk. The issue was exactly as I thought, and as I > described in the bug report, but I needed confirmation that this was > indeed the problem as your issue might have been a different bug. If > you have subversion installed on your system, then you can obtain the > latest code using the command (via a terminal): > > svn co http://svn.gna.org/svn/relax/trunk ./relax-trunk > > See http://www.nmr-relax.com/download.html#Source_code_repository and > http://www.nmr-relax.com/manual/Latest_sources_relax_repositories.html > for more details. Otherwise you will have to wait for me to release > relax 3.2.3 with this as well as a few other bug fixes. > > Cheers, > > Edward > > > > On 1 July 2014 23:29, Ravi Pratap Barnwal <ravi1...@gmail.com> wrote: > > Hi Edward, > > I have submitted the bug-report. > > > > regards > > ravi > > > > > > On Mon, Jun 30, 2014 at 12:54 AM, Edward d'Auvergne < > edw...@nmr-relax.com> > > wrote: > >> > >> Hi Ravi, > >> > >> I think I have found what might be causing the problem. But I'll wait > >> until you have submitted a bug report before making any fixes and > >> releasing a new version of relax, just to be sure that the problem you > >> are seeing is the problem I am fixing. > >> > >> Cheers, > >> > >> Edward > >> > >> > >> On 30 June 2014 08:28, Edward d'Auvergne <edw...@nmr-relax.com> wrote: > >> > Hi Ravi, > >> > > >> > I'm having difficulty replicating the issue. Would you be able to > >> > create a bug report using the link > >> > https://gna.org/bugs/?func=additem&group=relax ? Cheers! The more > >> > information you include the better. For example the minimal steps > >> > require to trigger the bug. You could also attach your screenshot > >> > there. If there is enough detail for me to replicate the bug, then it > >> > usually takes me 5-10 minutes to fix it. I could then release relax > >> > 3.2.3 later this week with the fix. > >> > > >> > Cheers, > >> > > >> > Edward > >> > > >> > > >> > On 27 June 2014 21:04, Ravi Pratap Barnwal <ravi1...@gmail.com> > wrote: > >> >> Hi Edward, > >> >> I am using version 3.2.2 on mac 10.8.5 (mountain lion). I am using > GUI > >> >> mode > >> >> to run the relax. Here is the report from "Tools-> System > Information" > >> >> > >> >> > >> >> > >> >> > >> >> relax 3.2.2 > >> >> > >> >> Molecular dynamics by NMR data analysis > >> >> > >> >> Copyright (C) 2001-2006 Edward > d'Auvergne > >> >> Copyright (C) 2006-2014 the relax > development > >> >> team > >> >> > >> >> This is free software which you are welcome to modify and > redistribute > >> >> under > >> >> the conditions of the > >> >> GNU General Public License (GPL). This program, including all > modules, > >> >> is > >> >> licensed under the GPL > >> >> and comes with absolutely no warranty. For details type 'GPL' within > >> >> the > >> >> relax prompt. > >> >> > >> >> Assistance in using the relax prompt and scripting interface can be > >> >> accessed > >> >> by typing 'help' within > >> >> the prompt. > >> >> > >> >> Processor fabric: Uni-processor. > >> >> > >> >> > >> >> relax> sys_info() > >> >> > >> >> Hardware information: > >> >> Machine: x86_64 > >> >> Processor: i386 > >> >> Processor name: Intel(R) Xeon(R) CPU W3530 @ > >> >> 2.80GHz > >> >> Endianness: little > >> >> Total RAM size: 2048.0 Mb > >> >> Total swap size: 11264.0 Mb > >> >> > >> >> Operating system information: > >> >> System: Darwin > >> >> Release: 12.5.0 > >> >> Version: Darwin Kernel Version 12.5.0: Sun Sep 29 > >> >> 13:33:47 PDT 2013; root:xnu-2050.48.12~1/RELEASE_X86_64 > >> >> Mac version: 10.8.5 (, , ) x86_64 > >> >> Distribution: > >> >> Full platform string: Darwin-12.5.0-x86_64-i386-64bit > >> >> > >> >> Python information: > >> >> Architecture: 64bit > >> >> Python version: 2.7.2 > >> >> Python branch: > >> >> Python build: default, Apr 5 2012 18:46:15 > >> >> Python compiler: GCC 4.2.1 (Apple Inc. build 5666) (dot > 3) > >> >> Libc version: > >> >> Python implementation: CPython > >> >> Python revision: > >> >> Python executable: > >> >> /Applications/relax.app/Contents/MacOS/python > >> >> Python flags: sys.flags(debug=0, py3k_warning=0, > >> >> division_warning=0, division_new=0, inspect=0, interactive=0, > >> >> optimize=1, > >> >> dont_write_bytecode=0, no_user_site=0, no_site=0, > ignore_environment=0, > >> >> tabcheck=0, verbose=0, unicode=0, bytes_warning=0) > >> >> Python float info: > >> >> sys.float_info(max=1.7976931348623157e+308, > >> >> max_exp=1024, max_10_exp=308, min=2.2250738585072014e-308, > >> >> min_exp=-1021, > >> >> min_10_exp=-307, dig=15, mant_dig=53, epsilon=2.220446049250313e-16, > >> >> radix=2, rounds=1) > >> >> Python module path: > >> >> ['/Applications/relax.app/Contents/Resources/lib/python27.zip', > >> >> '/Applications/relax.app/Contents/Resources/lib/python2.7', > >> >> > '/Applications/relax.app/Contents/Resources/lib/python2.7/plat-darwin', > >> >> '/Applications/relax.app/Contents/Resources/lib/python2.7/plat-mac', > >> >> > >> >> > '/Applications/relax.app/Contents/Resources/lib/python2.7/plat-mac/lib-scriptpackages', > >> >> '/Applications/relax.app/Contents/Resources/lib/python2.7/lib-tk', > >> >> '/Applications/relax.app/Contents/Resources/lib/python2.7/lib-old', > >> >> > '/Applications/relax.app/Contents/Resources/lib/python2.7/lib-dynload', > >> >> > >> >> > '/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip', > >> >> > >> >> > '/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages', > >> >> > >> >> > '/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages'] > >> >> > >> >> Python packages and modules (most are optional): > >> >> > >> >> Name Installed Version Path > >> >> minfx True 1.0.6 > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/minfx > >> >> bmrblib True 1.0.3 > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/bmrblib > >> >> numpy True 1.6.1 > >> >> /Applications/relax.app/Contents/Resources/lib/python2.7/numpy > >> >> scipy True 0.10.1 > >> >> /Applications/relax.app/Contents/Resources/lib/python2.7/scipy > >> >> wxPython True 2.9.3.1 osx-cocoa (classic) > >> >> /Applications/relax.app/Contents/Resources/lib/python2.7/wx > >> >> matplotlib False > >> >> mpi4py True 1.2.2 > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/mpi4py > >> >> epydoc True 3.0.1 > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/epydoc > >> >> optparse True 1.5.3 > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/optparse.pyc > >> >> readline False > >> >> profile True > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/profile.pyc > >> >> bz2 True > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/lib-dynload/bz2.so > >> >> gzip True > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/gzip.pyc > >> >> io True > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/io.pyc > >> >> xml True 0.8.4 (internal) > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/xml/__init__.pyc > >> >> xml.dom.minidom True > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/xml/dom/minidom.pyc > >> >> > >> >> relax information: > >> >> Version: 3.2.2 > >> >> Processor fabric: Uni-processor. > >> >> > >> >> relax C modules: > >> >> > >> >> Module Compiled File type > >> >> Path > >> >> target_functions.relax_fit True 3-way bundle (i386, ppc, > >> >> x86_64) > >> >> > >> >> > /Applications/relax.app/Contents/Resources/lib/python2.7/lib-dynload/target_functions/relax_fit.so > >> >> > >> >> > >> >> > >> >> regards > >> >> ravi > >> >> > >> >> > >> >> On Fri, Jun 27, 2014 at 12:28 AM, Edward d'Auvergne > >> >> <edw...@nmr-relax.com> > >> >> wrote: > >> >>> > >> >>> Hi Ravi, > >> >>> > >> >>> Which version of relax are you using and which operating system are > >> >>> you running it on? Are you using the newest 3.2.2 version? Could > you > >> >>> run 'relax -i' or, in the GUI, select the 'Tools->System > information' > >> >>> menu item and the copy and paste the output into the body of a new > >> >>> email? Note that due to too much abuse of the system, attachments > are > >> >>> no longer allowed on the relax mailing lists to avoid excessive > strain > >> >>> on the open source infrastructure. All attachments are filtered, > i.e. > >> >>> stripped from the message. See your archived message at > >> >>> http://article.gmane.org/gmane.science.nmr.relax.user/1695 for > >> >>> example. If you would like to share a file in such a situation, the > >> >>> best solution is to create a bug report using the link > >> >>> https://gna.org/bugs/?func=additem&group=relax and to attach the > file > >> >>> there. There are also support requests for non-bug related issues > >> >>> where files can also be attached > >> >>> (https://gna.org/support/?func=additem&group=relax). > >> >>> > >> >>> Cheers, > >> >>> > >> >>> Edward > >> >>> > >> >>> > >> >>> On 27 June 2014 00:50, Ravi Pratap Barnwal <ravi1...@gmail.com> > wrote: > >> >>> > Hi, > >> >>> > I am encountering problem while loading R1,R2 and nOe values > >> >>> > calculated > >> >>> > for > >> >>> > two different fields into relax (precompiled version 3.2.2) for > mac > >> >>> > 10.8.5. > >> >>> > When i try to add the data and try to change the "free format file > >> >>> > settings" for respective file, it is kind of hanging and does not > >> >>> > proceed > >> >>> > anywhere. My files are in the following format, > >> >>> > 3 GLY 1.814795542 0.090739777 > >> >>> > 4 SER 2.267446596 0.11337233 > >> >>> > 5 MET 2.621469801 0.13107349 > >> >>> > 6 ASP 2.751590887 0.137579544 > >> >>> > > >> >>> > > >> >>> > Am i doing something wrong? I am following the protocol from this > >> >>> > link, > >> >>> > > >> >>> > > >> >>> > > >> >>> > > http://www.nmr-relax.com/manual/d_Auvergne_protocol_GUI_mode_data_pipe_initialisation.html > >> >>> > > >> >>> > I have attached a screen-shot for the problem. Any help is highly > >> >>> > appreciated. > >> >>> > > >> >>> > regards > >> >>> > ravi > >> >>> > _______________________________________________ > >> >>> > relax (http://www.nmr-relax.com) > >> >>> > > >> >>> > This is the relax-users mailing list > >> >>> > relax-users@gna.org > >> >>> > > >> >>> > To unsubscribe from this list, get a password > >> >>> > reminder, or change your subscription options, > >> >>> > visit the list information page at > >> >>> > https://mail.gna.org/listinfo/relax-users > >> >> > >> >> > >> >> > >> >> > >> >> -- > >> >> --With best wishes > >> >> Ravi Pratap Barnwal, Ph. D. > >> >> Research Associate, > >> >> Prof. G Varani's Group, > >> >> Department of Chemistry, > >> >> University of Washington, Seattle > >> >> WA 98195-1700 > >> >> USA > >> >> Phone-206 617 9423 (M) > >> >> Email- barn...@u.washington.edu > > > > > > > > > > -- > > --With best wishes > > Ravi Pratap Barnwal, Ph. D. > > Research Associate, > > Prof. G Varani's Group, > > Department of Chemistry, > > University of Washington, Seattle > > WA 98195-1700 > > USA > > Phone-206 617 9423 (M) > > Email- barn...@u.washington.edu > -- --With best wishes Ravi Pratap Barnwal, Ph. D. Research Associate, Prof. G Varani's Group, Department of Chemistry, University of Washington, Seattle WA 98195-1700 USA Phone-206 617 9423 (M) Email- barn...@u.washington.edu _______________________________________________ relax (http://www.nmr-relax.com) This is the relax-users mailing list relax-users@gna.org To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users
