Stepping into the mix with $0.02 ...

A huge problem in the PC world is that many devices and Windows itself formats 
with 255/63 heads/sectors, which results in a non-even cylinder.  Anaconda is 
only going to preserve the existing geometry, for compatibility.  It's not 
Anaconda causing the issue, at least that has been my experience.

Going back to when kernel 2.6 / parted was first adopted not by just Anaconda, 
but many other installers, with official, "to-the-spec" Extended Interrupt 13h 
support, most everyone dual-booting ran into issues.  And even when not, there 
were disconnects between the BIOS and disk geometry.  Since then every 
installer 
has been rather conservative, preserving existing geometry.

One way to address this is to use parted to slice the disk so even when 255/63 
head/sector geometry is utilized for various compatibility, things are LBA 
even.  I've seen Anaconda able to do this at times.  But there's still a lot of 
legacy issues and conservative defaults involved.  Which is why dropping to 
Alt-F2 and ensuring geometry is setup as you desire is the best way.

Until EFI/GPT takes over in the PC world, I don't see this being always 
addressed automatically and programmatically.  Just my view.

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