On 06/22/2012 05:23 AM, Iain Morrison wrote:
Dear list, I have some Dell servers which are failing to update to RHEL 6.3 with the following message:Loaded plugins: aliases, changelog, downloadonly, kabi, presto, product-id, refresh-packagekit, rhnplugin, security, : subscription-manager, tmprepo, verify, versionlock Updating certificate-based repositories. Loading support for Red Hat kernel ABI rhel-x86_64-server-6 | 1.8 kB 00:00 rhel-x86_64-server-hts-6 | 1.6 kB 00:00 rhel-x86_64-server-optional-6 | 1.8 kB 00:00 rhn-tools-rhel-x86_64-server-6 | 1.6 kB 00:00 Setting up Update Process Resolving Dependencies --> Running transaction check ... ---> Package openmpi.x86_64 0:1.5.3-3.el6 will be updated --> Processing Dependency: libotf.so.0()(64bit) for package: 1:emacs-23.1-21.el6_2.3.x86_64 Package openmpi-psm is obsoleted by openmpi, but obsoleting package does not provide for requirements ---> Package openmpi.x86_64 0:1.5.4-1.el6 will be an update ... ---> Package openmpi.x86_64 0:1.5.3-3.el6 will be updated --> Processing Dependency: libotf.so.0()(64bit) for package: 1:emacs-23.1-21.el6_2.3.x86_64 Package openmpi-psm is obsoleted by openmpi, but obsoleting package does not provide for requirements ---> Package perl-Compress-Raw-Bzip2.x86_64 0:2.020-127.el6 will be installed ---> Package perl-IO-Compress-Bzip2.x86_64 0:2.020-127.el6 will be installed ---> Package python-krbV.x86_64 0:1.0.90-3.el6 will be installed ---> Package system-config-keyboard-base.x86_64 0:1.3.1-4.el6 will be installed ---> Package systemtap-client.x86_64 0:1.7-5.el6 will be installed ---> Package systemtap-devel.x86_64 0:1.7-5.el6 will be installed --> Running transaction check ---> Package libwacom-data.noarch 0:0.5-3.el6 will be installed ---> Package openmpi.x86_64 0:1.5.3-3.el6 will be updated --> Processing Dependency: libotf.so.0()(64bit) for package: 1:emacs-23.1-21.el6_2.3.x86_64 Package openmpi-psm is obsoleted by openmpi, but obsoleting package does not provide for requirements --> Finished Dependency Resolution --> Running transaction check ---> Package kernel.x86_64 0:2.6.32-220.7.1.el6 will be erased ---> Package kernel-devel.x86_64 0:2.6.32-220.7.1.el6 will be erased ---> Package openmpi.x86_64 0:1.5.3-3.el6 will be updated --> Processing Dependency: libotf.so.0()(64bit) for package: 1:emacs-23.1-21.el6_2.3.x86_64 Package openmpi-psm is obsoleted by openmpi, but obsoleting package does not provide for requirements --> Finished Dependency Resolution Error: Package: 1:emacs-23.1-21.el6_2.3.x86_64 (@rhel-x86_64-server-6) Requires: libotf.so.0()(64bit) Removing: openmpi-1.5.3-3.el6.x86_64 (@Red Hat Enterprise Linux/6.2) libotf.so.0()(64bit) Updated By: openmpi-1.5.4-1.el6.x86_64 (rhel-x86_64-server-6) Not found Available: libotf-0.9.9-3.1.el6.x86_64 (rhel-x86_64-server-6) libotf.so.0()(64bit) Available: openmpi-psm-1.5.3-3.el6.x86_64 (rhel-x86_64-server-6) libotf.so.0()(64bit) Available: openmpi-psm-1.4.1-4.3.el6.x86_64 (rhel-x86_64-server-6) Not found Available: openmpi-psm-1.4.3-1.1.el6.x86_64 (rhel-x86_64-server-6) Not found You could try using --skip-broken to work around the problem You could try running: rpm -Va --nofiles --nodigest I couldn't find any reference to openmpi in the release notes, and there is no openmpi-psm package rpm -qi openmpi-psm package openmpi-psm is not installed rpm -qi openmpi Name : openmpi Relocations: (not relocatable) Version : 1.5.3 Vendor: Red Hat, Inc. Release : 3.el6 Build Date: Tue 18 Oct 2011 07:45:18 PM BST Install Date: Mon 02 Apr 2012 11:11:57 AM BST Build Host: x86-001.build.bos.redhat.com Group : Development/Libraries Source RPM: openmpi-1.5.3-3.el6.src.rpm Size : 7413687 License: BSD, MIT and Romio Signature : RSA/8, Tue 08 Nov 2011 04:01:22 PM GMT, Key ID 199e2f91fd431d51 Packager : Red Hat, Inc. <http://bugzilla.redhat.com/bugzilla> URL : http://www.open-mpi.org/ Summary : Open Message Passing Interface Description : Open MPI is an open source, freely available implementation of both the MPI-1 and MPI-2 standards, combining technologies and resources from several other projects (FT-MPI, LA-MPI, LAM/MPI, and PACX-MPI) in order to build the best MPI library available. A completely new MPI-2 compliant implementation, Open MPI offers advantages for system and software vendors, application developers, and computer science researchers. For more information, see http://www.open-mpi.org/ . rpm -Va --nofiles --nodigest produces no output. I'm not sure what to do, as --skip-broken sounds a bit risky. [We have an academic license agreement so I can't raise a call.] Any advice appreciated. thanks iain -- Iain Morrison IT Manager MRC Epidemiology Unit Institute of Metabolic Science Box 285 Addenbrooke's Hospital Hills Road Cambridge CB2 0QQ Tel 01223 769200
openmpi-psm is definitely part of the Red Hat Enterprise Linux Server (v. 6 for 64-bit x86_64) channel. Have you tried "yum clean metadata" or even "yum clean all" and then trying again?
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