Hi,

> I'm trying to fit an experimental Si pattern to refine the zero offset for
> out instrument.   The calculated spectrum has 2 extra lines, and three
> missing lines.   I've hand calculated the expected location of lines in the
> experimental spectrum and account for all of the lines, so I know I don't
> have the wrong spectrum or contaminated Si.
[...]
   2   2   0      12 0.2615814   47.5278    0.1502 3.580E+04  896.       
189.198   0     0.000  not in calculated pattern
   2   2   2       8 0.3203704   59.1481    0.1502  262.      7.55        
16.189   0     0.000  NOT ALLOWED, but calculated
   4   2   2      24 0.4530722   88.5339    0.1502 5.947E+03  150.        
77.114   0     0.000  not in calculated pattern
   6   2   0      24 0.5849137  128.6134    0.1502  522.      14.1        
22.849   0   180.000  not in calculated pattern
   6   2   2      24 0.6134627  141.8573    0.1502  166.      5.15        
12.887   0     0.000  NOT ALLOWED, but calculated

   I'm not a GSAS specialist but it looks like you have a spacegroup
problem. If you have correctly chosen Fd-3m(227) then you still
have to correctly choose the origin of the SG : it can be either
Fd-3m:1 or Fd-3m:2 (I don't know how the SG origin choice is made
in gsas).
   See the SG & origins description on the Bilbao server :

http://www.cryst.ehu.es/cgi-bin/cryst/programs/nph-wp-list

   Practically, your Si atom should *not* be on the inversion center,
which itself is either at (0,0,0) for Fd-3m:2, or at (1/8,1/8,1/8) for 
Fd-3m:1...

   It looks like you may have your si atom at (0,0,0) and are using Fd-3m:2
for a spacegroup, in which case try changing the sg origin or shift
your si atom by +/-(1/8,1/8,1/8)

        Vincent
-- 
Vincent Favre-Nicolin
Université Joseph Fourier
http://v.favrenicolin.free.fr
ObjCryst & Fox : http://objcryst.sourceforge.net

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