Thomas Friedrichsmeier a écrit :
Hi,

On Tuesday 20 April 2010, you wrote:
 From make plugintests:

import_spss                   match          MISMATCH
MISMATCH       ERROR          FAIL
import_stata                  match          MISMATCH
MISMATCH       ERROR          FAIL
shapiro_wilk_test             match          MISMATCH       match
(empty)  no             FAIL
lillie_test                   match          MISMATCH       match
(empty)  no             FAIL

could you post/attach the difference listings for these tests?

copy/pasted on attached file. It is a little bit messy as some text is hidden in console. Is there a possibility: -to have output separately from console so everything shown and easier to send you?
-to run tests separately?
Otherwise, still need to install some packages, do you have a list of
all packages that are needed to run plugintests? Or should I make one
manually?

I don't have a list, you'll have to make your own for now (but in the future it might be a good idea to have the test-framework print a list of the packages that were missing).

so this would be the list:
install.packages(c("R2HTML", "tseries", "nortest", "outliers", "exactRankTests", "moments", "car", "hdrcde", "qcc", "xtable", "eRm", "ltm"))

maybe you could incude it in the compiling/testing website and/or in the plugintest makefile itself?
Is there actually a shortcut to switch from script editor to console and
vice versa (like emacs C-x o)? Or should one use show/hide console?

Not quite, but there are some options that come close: You can switch back and forth using Alt+0 and Alt+5. You can press Alt+5 repeatedly, which will show/hide the console. Or you can detach the console window and use Alt+Tab to switch between that and the main window. I do intend to add an Alt+Tab-like feature to switch between the most recent rkward windows, sooner or later, but it's not trivial to do.

ok thanks. I indeed used Alt+0/Alt+5, but definitely would be nice once to have direct switch
I think this is not new but copying directly from console with ctrl+v is
not possible, right?

It is possible to copy from the console, but Ctrl+C is used for "interrupt command" (which might not be a good idea, after all; what does everybody else think?). There are two different copy-actions in the Edit-menu, and by now you can also customize the shortcuts using Settings->Configure shortcuts.

I tried to used this. But as soon as I use "ctrl", brings me back to latest console line... About which should be the default, as rather "GUI user" and so linux geek, I would argue ctrl+c as copy is more intuitive...



Mat
Regards
Thomas
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lillie_test                   match          MISMATCH       match (empty)  no   
          FAIL  
shapiro_wilk_test             match          MISMATCH       match (empty)  no   
          FAIL
kpss_test                     match          MISMATCH       MISMATCH       no   
          FAIL 
Wald_test                     match          MISMATCH       MISMATCH       no   
          FAIL 
RSM_parameter_estimation      match          MISMATCH       match (empty)  no   
          FAIL           
PCM_parameter_estimation      match          MISMATCH       match (empty)  no   
          FAIL  
import_spss                   match          MISMATCH       MISMATCH       
ERROR          FAIL           
import_stata                  match          MISMATCH       MISMATCH       
ERROR          FAIL   
density_plot                  match          match          MISMATCH       no   
          FAIL

-------------------------------------------------------------------------------
[1] "Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/plots/density_plot.messages.txt
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/plots/RKTestStandard.density_plot.messages.txt
 :"
[1] "1,3d0"                                                               
[2] "< Warning message:"                                                  
[3] "< In sample(den$x, 500, replace = TRUE, prob = den$y) :"             
[4] "<   Walker's alias method used: results are different from R < 2.2.0"
-------------------------------------------------------------------------------



[1] "Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/distributions/shapiro_wilk_test.rkout
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/distributions/RKTestStandard.shapiro_wilk_test.rkout
 :"
[1] "5,6c5,6"                                                                   
                     
[2] "< <tr><td>shape</td><td>48</td><td>0</td><td>W = 
0.904069127432427</td><td>0.00085306</td></tr>"
[3] "< <tr><td>perm</td><td>48</td><td>0</td><td>W = 
0.803262889817012</td><td>1.5418e-06</td></tr>" 
[4] "---"                                                                       
                     
[5] "> <tr><td>shape</td><td>48</td><td>0</td><td>W = 
0.904069181319154</td><td>0.00085307</td></tr>"
[6] "> <tr><td>perm</td><td>48</td><td>0</td><td>W = 
0.803262753495175</td><td>1.5417e-06</td></tr>" 
[1] "Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/distributions/lillie_test.rkout
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/distributions/RKTestStandard.lillie_test.rkout
 :"
[1] "5c5"                                                                       
                    
[2] "< <tr><td>shape</td><td>48</td><td>0</td><td>D = 
0.169786656172250</td><td>0.0013779</td></tr>"
[3] "---"                                                                       
                    
[4] "> <tr><td>shape</td><td>48</td><td>0</td><td>D = 
0.16978665617225</td><td>0.0013779</td></tr>" 
-------------------------------------------------------------------------------
"Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/analysis_plugins/kpss_test.rkout
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/analysis_plugins/RKTestStandard.kpss_test.rkout
 :"
[1] "9,10c9,10"                                                                 
                 
[2] "< 
<tr><td>test10y</td><td>11</td><td>1</td><td>-7.1558e-11</td><td>2</td><td>0.1</td></tr>"
 
[3] "< 
<tr><td>test10z</td><td>11</td><td>1</td><td>-4.5309e-53</td><td>2</td><td>0.1</td></tr>"
 
[4] "---"                                                                       
                 
[5] "> 
<tr><td>test10y</td><td>11</td><td>1</td><td>0.12980</td><td>2</td><td>0.079995</td></tr>"
[6] "> 
<tr><td>test10z</td><td>11</td><td>1</td><td>0.11135</td><td>2</td><td>0.1</td></tr>"
     
[1] "Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/analysis_plugins/kpss_test.messages.txt
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/analysis_plugins/RKTestStandard.kpss_test.messages.txt
 :"
[1] "6,7d5"                                                     
[2] "< 3: In kpss.test(var, null = \"Trend\", lshort = FALSE) :"
[3] "<   p-value greater than printed p-value"                
[19] "> \t\t<th>strings</th>
-------------------------------------------------------------------------------
 Package 'exactRankTests' is no longer under development.
  Please consider using package 'coin' instead.

-------------------------------------------------------------------------------
Loading required package: RaschSampler
[1] "Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/item_response_theory/RSM_parameter_estimation.rkout
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/item_response_theory/RKTestStandard.RSM_parameter_estimation.rkout
 :"
 [1] "11,17c11,17"                                                              
                                   
 [2] "<  <tr><td class=firstcolumn>I2</td><td class=cellinside> 0.305</td><td 
class=cellinside> 0.205</td></tr>"   
 [3] "<  <tr><td class=firstcolumn>I3</td><td class=cellinside> 0.256</td><td 
class=cellinside> 0.203</td></tr>"   
 [4] "<  <tr><td class=firstcolumn>I4</td><td class=cellinside> 0.067</td><td 
class=cellinside> 0.197</td></tr>"   
 [5] "<  <tr><td class=firstcolumn>I5</td><td class=cellinside>-0.160</td><td 
class=cellinside> 0.197</td></tr>"   
 [6] "<  <tr><td class=firstcolumn>I6</td><td class=cellinside>-0.444</td><td 
class=cellinside> 0.208</td></tr>"   
 [7] "<  <tr><td class=firstcolumn>Cat 2</td><td 
class=cellinside>-0.167</td><td class=cellinside> 0.460</td></tr>"
 [8] "<  <tr><td class=firstcolumn>Cat 3</td><td class=cellinside> 
0.138</td><td class=cellinside> 0.732</td></tr>"
 [9] "---"                                                                      
                                   
[10] ">  <tr><td class=firstcolumn>eta 1</td><td 
class=cellinside>-0.305</td><td class=cellinside> 0.205</td></tr>"
[11] ">  <tr><td class=firstcolumn>eta 2</td><td 
class=cellinside>-0.256</td><td class=cellinside> 0.203</td></tr>"
[12] ">  <tr><td class=firstcolumn>eta 3</td><td 
class=cellinside>-0.067</td><td class=cellinside> 0.197</td></tr>"
[13] ">  <tr><td class=firstcolumn>eta 4</td><td class=cellinside> 
0.160</td><td class=cellinside> 0.197</td></tr>"
[14] ">  <tr><td class=firstcolumn>eta 5</td><td class=cellinside> 
0.444</td><td class=cellinside> 0.208</td></tr>"
[15] ">  <tr><td class=firstcolumn>eta 6</td><td class=cellinside> 
0.167</td><td class=cellinside> 0.460</td></tr>"
[16] ">  <tr><td class=firstcolumn>eta 7</td><td 
class=cellinside>-0.138</td><td class=cellinside> 0.732</td></tr>"
[1] "Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/item_response_theory/PCM_parameter_estimation.rkout
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/item_response_theory/RKTestStandard.PCM_parameter_estimation.rkout
 :"
 [1] "11,29c11,29"                                                              
                                    
 [2] "<  <tr><td class=firstcolumn>I1.c2</td><td 
class=cellinside>-0.937</td><td class=cellinside> 0.565</td></tr>" 
 [3] "<  <tr><td class=firstcolumn>I1.c3</td><td class=cellinside> 
0.330</td><td class=cellinside> 0.809</td></tr>" 
 [4] "<  <tr><td class=firstcolumn>I2.c1</td><td 
class=cellinside>-0.251</td><td class=cellinside> 0.525</td></tr>" 
 [5] "<  <tr><td class=firstcolumn>I2.c2</td><td 
class=cellinside>-0.065</td><td class=cellinside> 0.580</td></tr>" 
 [6] "<  <tr><td class=firstcolumn>I2.c3</td><td class=cellinside> 
1.432</td><td class=cellinside> 1.024</td></tr>" 
 [7] "<  <tr><td class=firstcolumn>I3.c1</td><td class=cellinside> 
0.224</td><td class=cellinside> 0.561</td></tr>" 
 [8] "<  <tr><td class=firstcolumn>I3.c2</td><td class=cellinside> 
0.074</td><td class=cellinside> 0.568</td></tr>" 
 [9] "<  <tr><td class=firstcolumn>I3.c3</td><td class=cellinside> 
0.878</td><td class=cellinside> 0.784</td></tr>" 
[10] "<  <tr><td class=firstcolumn>I4.c1</td><td 
class=cellinside>-0.423</td><td class=cellinside> 0.547</td></tr>" 
[11] "<  <tr><td class=firstcolumn>I4.c2</td><td class=cellinside> 
0.263</td><td class=cellinside> 0.689</td></tr>" 
[12] "<  <tr><td class=firstcolumn>I4.c3</td><td 
class=cellinside>-0.140</td><td class=cellinside> 0.650</td></tr>" 
[13] "<  <tr><td class=firstcolumn>I5.c1</td><td class=cellinside> 
0.980</td><td class=cellinside> 0.788</td></tr>" 
[14] "<  <tr><td class=firstcolumn>I5.c2</td><td 
class=cellinside>-0.096</td><td class=cellinside> 0.585</td></tr>" 
[15] "<  <tr><td class=firstcolumn>I5.c3</td><td 
class=cellinside>-0.403</td><td class=cellinside> 0.579</td></tr>" 
[16] "<  <tr><td class=firstcolumn>I6.c1</td><td class=cellinside> 
0.586</td><td class=cellinside> 0.826</td></tr>" 
[17] "<  <tr><td class=firstcolumn>I6.c2</td><td 
class=cellinside>-0.504</td><td class=cellinside> 0.634</td></tr>" 
[18] "<  <tr><td class=firstcolumn>I6.c3</td><td 
class=cellinside>-1.100</td><td class=cellinside> 0.587</td></tr>" 
[19] "<  <tr><td class=firstcolumn>I7.c1</td><td 
class=cellinside>-0.849</td><td class=cellinside> 0.504</td></tr>" 
[20] "<  <tr><td class=firstcolumn>I7.c2</td><td class=cellinside> 
0.298</td><td class=cellinside> 0.701</td></tr>" 
[21] "---"                                                                      
                                    
[22] ">  <tr><td class=firstcolumn>eta 1</td><td class=cellinside> 
0.937</td><td class=cellinside> 0.565</td></tr>" 
[23] ">  <tr><td class=firstcolumn>eta 2</td><td 
class=cellinside>-0.330</td><td class=cellinside> 0.809</td></tr>" 
[24] ">  <tr><td class=firstcolumn>eta 3</td><td class=cellinside> 
0.251</td><td class=cellinside> 0.525</td></tr>" 
[25] ">  <tr><td class=firstcolumn>eta 4</td><td class=cellinside> 
0.065</td><td class=cellinside> 0.580</td></tr>" 
[26] ">  <tr><td class=firstcolumn>eta 5</td><td 
class=cellinside>-1.432</td><td class=cellinside> 1.024</td></tr>" 
[27] ">  <tr><td class=firstcolumn>eta 6</td><td 
class=cellinside>-0.224</td><td class=cellinside> 0.561</td></tr>" 
[28] ">  <tr><td class=firstcolumn>eta 7</td><td 
class=cellinside>-0.074</td><td class=cellinside> 0.568</td></tr>" 
[29] ">  <tr><td class=firstcolumn>eta 8</td><td 
class=cellinside>-0.878</td><td class=cellinside> 0.784</td></tr>" 
[30] ">  <tr><td class=firstcolumn>eta 9</td><td class=cellinside> 
0.423</td><td class=cellinside> 0.547</td></tr>" 
[31] ">  <tr><td class=firstcolumn>eta 10</td><td 
class=cellinside>-0.263</td><td class=cellinside> 0.689</td></tr>"
[32] ">  <tr><td class=firstcolumn>eta 11</td><td class=cellinside> 
0.140</td><td class=cellinside> 0.650</td></tr>"
[33] ">  <tr><td class=firstcolumn>eta 12</td><td 
class=cellinside>-0.980</td><td class=cellinside> 0.788</td></tr>"
[34] ">  <tr><td class=firstcolumn>eta 13</td><td class=cellinside> 
0.096</td><td class=cellinside> 0.585</td></tr>"
[35] ">  <tr><td class=firstcolumn>eta 14</td><td class=cellinside> 
0.403</td><td class=cellinside> 0.579</td></tr>"
[36] ">  <tr><td class=firstcolumn>eta 15</td><td 
class=cellinside>-0.586</td><td class=cellinside> 0.826</td></tr>"
[37] ">  <tr><td class=firstcolumn>eta 16</td><td class=cellinside> 
0.504</td><td class=cellinside> 0.634</td></tr>"
[38] ">  <tr><td class=firstcolumn>eta 17</td><td class=cellinside> 
1.100</td><td class=cellinside> 0.587</td></tr>"
[39] ">  <tr><td class=firstcolumn>eta 18</td><td class=cellinside> 
0.849</td><td class=cellinside> 0.504</td></tr>"
[40] ">  <tr><td class=firstcolumn>eta 19</td><td 
class=cellinside>-0.298</td><td class=cellinside> 0.701</td></tr>"
I2 I3 I4 I5 
Subgroup models are estimated without these items!
[1] "Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/item_response_theory/Wald_test.rkout
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/item_response_theory/RKTestStandard.Wald_test.rkout
 :"
[1] "3c3"                                                                       
                                                                                
                                                                                
                                                                                
                                     
[2] "< <p class='character'><br>Wald test on item level (z-values):<br><br>     
      z-statistic p-value<br>beta I1.c1       0.388   0.698<br>beta I1.c2       
0.048   0.962<br>beta I1.c3       0.049   0.961<br>beta I6.c1      -0.388   
0.698<br>beta I6.c2       0.045   0.964<br>beta I6.c3       0.047   
0.962<br></p><h2>Messages, warnings, or errors:</h2>"
[3] "---"                                                                       
                                                                                
                                                                                
                                                                                
                                     
[4] "> <p class='character'><br>Wald test on item level (z-values):<br><br>     
      z-statistic p-value<br>beta I1.c1       0.388   0.698<br>beta I1.c2       
  NaN     NaN<br>beta I1.c3         NaN     NaN<br>beta I6.c1      -0.388   
0.698<br>beta I6.c2         NaN     NaN<br>beta I6.c3         NaN     
NaN<br></p><h2>Messages, warnings, or errors:</h2>"
[1] "Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/item_response_theory/Wald_test.messages.txt
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/item_response_theory/RKTestStandard.Wald_test.messages.txt
 :"
[1] "3a4,7"                                                               
[2] "> Warning messages:"                                                 
[3] "> 1: In sqrt(diag(solve(parest$hessian))) : NaNs produced"           
[4] "> 2: In sqrt(diag(lres$W %*% solve(parest$hessian) %*% t(lres$W))) :"
[5] ">   NaNs produced"                                                   
Warning message: Persons with median raw scores are assigned to the lower raw 
score group!
I2 I4 I1 I5 
Full and subgroup models are estimated without these items!

-------------------------------------------------------------------------------
lines below might be redundand...
------------------------------------------------------------------------------- 
"                                                                               
                                                               
[20] "> \t</tr> <tr> <td class=firstcolumn>1</td><td class=cellinside> 
1</td><td class=cellinside>value1</td><td class=cellinside>a string</td></tr>"  
                     
[21] ">  <tr> <td class=firstcolumn>2</td><td class=cellinside> 2</td><td 
class=cellinside>value2</td><td class=cellinside>another</td></tr>"             
                  
[22] ">  <tr> <td class=firstcolumn>3</td><td class=cellinside> 3</td><td 
class=cellinside>value\xf6\xe4\xfc3</td><td class=cellinside>text</td></tr>"    
                  
[23] ">  <tr> <td class=firstcolumn>4</td><td class=cellinside> 4</td><td 
class=cellinside> </td><td class=cellinside>test</td></tr>"                     
                  
[24] ">  <tr> <td class=firstcolumn>5</td><td class=cellinside> </td><td 
class=cellinside>value1</td><td class=cellinside>\xe4\xf6\xfc\xdf</td></tr>"    
                   
[25] ">  <tr> <td class=firstcolumn>6</td><td class=cellinside> 6</td><td 
class=cellinside>value2</td><td class=cellinside>$\x80</td></tr>"               
                  
[26] ">  <tr> <td class=firstcolumn>7</td><td class=cellinside> 7</td><td 
class=cellinside>value\xf6\xe4\xfc3</td><td class=cellinside> </td></tr>"       
                  
[27] ">  <tr> <td class=firstcolumn>8</td><td class=cellinside> 8</td><td 
class=cellinside> </td><td class=cellinside>last</td></tr>"                     
                  
[28] ">  "                                                                      
                                                                                
            
[29] "> \t</tbody>"                                                             
                                                                                
            
[30] "> </table>"                                                               
                                                                                
            
[31] ">  </td></table>"                                                         
                                                                                
            
[32] ">  <br>"                                                                  
                                                                                
            
[33] "> <p class='character'>var (Variable label 1)</p><p class='character'>var 
(Variable label 2 with some special chars: \xe4\xf6\xfc#+߀)</p><p 
class='character'>var ()</p>"
[34] "\\ No newline at end of file"                                             
                                                                                
            
[1] "Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/import_export_plugins/import_stata.messages.txt
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/import_export_plugins/RKTestStandard.import_stata.messages.txt
 :"
[1] "1,3d0"                                                                     
[2] "< Error in make.names(attr(data, \"names\")[i]) : "                        
[3] "<   no function to return from, jumping to top level"                      
[4] "< Error in HTML(x, file = htmlfile, ...) : object 'my.stata.data' not 
found"
[1] "ok"

19  /  19  tests passed
(12 / 31 tests skipped due to missing libraries)[1] "Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/distributions/shapiro_wilk_test.rkout
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/distributions/RKTestStandard.shapiro_wilk_test.rkout
 :"
[1] "5,6c5,6"                                                                   
                    
[2] "< <tr><td>shape</td><td>48</td><td>0</td><td>W = 
0.904069127432427</td><td>0.00085306</td></tr>"
[3] "< <tr><td>perm</td><td>48</td><td>0</td><td>W = 
0.803262889817012</td><td>1.5418e-06</td></tr>"
[4] "---"                                                                       
                    
[5] "> <tr><td>shape</td><td>48</td><td>0</td><td>W = 
0.904069181319154</td><td>0.00085307</td></tr>"
[6] "> <tr><td>perm</td><td>48</td><td>0</td><td>W = 
0.803262753495175</td><td>1.5417e-06</td></tr>"
[1] "Differences between 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/distributions/lillie_test.rkout
 and 
/home/matvir/Téléchargements/rkward-0.5.3-pre2/tests/distributions/RKTestStandard.lillie_test.rkout
 :"
[1] "5c5"                                                                       
                   
[2] "< <tr><td>shape</td><td>48</td><td>0</td><td>D = 
0.169786656172250</td><td>0.0013779</td></tr>"
[3] "---"                                                                       
                   
[4] "> <tr><td>shape</td><td>48</td><td>0</td><td>D = 
0.16978665617225</td><td>0.0013779</td></tr>"



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