>     CREATE TABLE foo_bar_map (
>       id INTEGER AUTO_INCREMENT PRIMARY KEY NOT NULL,
>       foo_id INTEGER,
>       bar_id INTEGER,
>       FOREIGN KEY(foo_id) REFERENCES foos(id),
>       INDEX(foo_id),
>       FOREIGN KEY(bar_id) REFERENCES bars(id),
>       INDEX(bar_id)
>     )Type=InnoDB;

You could add a UNIQUE INDEX(foo_id, bar_id)

>     mysql> select * from foo_bar_map;
>     +----+--------+--------+
>     | id | foo_id | bar_id |
>     +----+--------+--------+
>     |  1 |      1 |      1 |
>     |  2 |      1 |      1 |
>     +----+--------+--------+

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