It looks like you have a newer version of python than I do. It is
proabably best at this point for you to compile your own copy of
RPy. Fortunately, this is straightforward.
Step -1: Ensure you have the gcc installed (installing XCode will do
the trick)
Step 0: Download and Install numpy
Numpy is at http://www.scipy.org/Download
Step 1: Download the Rpy source package: rpy-1.0.3.tar.gz
Step 2: Unpack the source package
Use a gui tool, or issue the shell command:
tar -xvzf rpy-1.0.3.tar.gz
in a directory containing rpy-1.0.3.tar.gz.
Step 3: Build rpy
At the shell, change into the rpy directory:
cd rpy-1.0.3
and execute the command
python setup.py build
Step 4: Install rpy
at the shell execute the command
sudo python setup.py install
and enter your password at the prompt.
This should create a working version of rpy, customizer to your
version of python and R.
-G
On May 18, 2008, at 10:36PM , Mirco Musolesi wrote:
Thanks Gregory.
I downloaded the new mac binary for 1.3.0.
Unfortunately, I got this error:
rpy.py:1: RuntimeWarning: Python C API version mismatch for module
_rpy2070: This Python has API version 1013, module _rpy2070 has
version 1012.
#
Mirco
On May 18, 2008, at 10:16 PM, Warnes, Gregory R wrote:
> I've uploaded a new mac binary for 1.3.0 that supports 2.6.2 and
> 2.7.0.
>
> -G
> ------Original Message------
> From: Mirco Musolesi
> To: rpy-list@lists.sourceforge.net
> ReplyTo: RPy help, support and design discussion list
> Sent: May 18, 2008 7:06 PM
> Subject: [Rpy] Problem with the installation of rpy on Mac (Leopard)
>
>
> Hello,
>
> I tried to install rpy.py on my Mac (running Mac OS X Leopard),
but I
> got the following error:
>
> musolesi$ python rpy.py install
> Traceback (most recent call last):
> File "rpy.py", line 134, in <module>
> """ % RVERSION)
> RuntimeError: No module named _rpy2062
>
> RPy module can not be imported. Please check if your rpy
> installation supports R 2.6.2. If you have multiple R
versions
> installed, you may need to set RHOME before importing rpy.
For
> example:
>
> >>> from rpy_options import set_options
> >>> set_options(RHOME='c:/progra~1/r/rw2011/')
> >>> from rpy import *
>
>
> I tried with the versions 2.6.2 and 2.7 of R. Unfortunately it seems
> that the version 2.6.1 of R cannot be installed in Leopard, I was
> wondering if it is the latest version that is supported.
>
> Thanks in advance for your help,
> Mirco
>
> --
> Mirco Musolesi
> Dept. of Computer Science, Dartmouth College
> 6211 Sudikoff Laboratory Hanover NH 03755 USA
> Web: http://www.cs.dartmouth.edu/~musolesi
>
>
>
>
>
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--
Mirco Musolesi
Dept. of Computer Science, Dartmouth College
6211 Sudikoff Laboratory Hanover NH 03755 USA
Web: http://www.cs.dartmouth.edu/~musolesi
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Gregory R. Warnes, Ph.D.
Associate Professor
Center for Biodefence Immune Modeling
and
Department of Biostatistics and Computational Biology
University of Rochester
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