On 2011-11-25 07:03, Laurent Gautier wrote:
On 2011-11-24 18:13, Luca Beltrame wrote:
Hello again,
(...)
If I try to run the RS4_Auto_Type example from the rpy2 documentation, I get:
In [28]: %cpaste
Pasting code; enter '--' alone on the line to stop.
:from rpy2.robjects.packages import importr
:stats4 = importr('stats4')
:from rpy2.robjects.methods import RS4, RS4Auto_Type
:
:class MLE(RS4):
: __metaclass__ = RS4Auto_Type
: __rname__ = 'mle'
: __rpackagename__ = 'stats4'
:--
Warning message:
In function (f, where, classes = character(), inherited = FALSE, :
non-generic function 'Biobase' given to findMethods()
[...]
LookupError: The object has no such attribute.
The culprit is at line 191 in robjects/methods.py:
for name, meth in itertools.izip(all_methods.do_slot("names"), all_methods):
Further debugging has shown that all_methods is empty.
Should I file a bug, or is it likely a local install problem?
I don't know. If you do file a bug report, you'll need the R version,
Python version, and rpy2 version.
I just had a quick look and this is working here with R-2.14, Python
2.7, rpy2-2.3.0-dev
So it does work with R-2.14, Python 2.7, rpy2-2.2.4
(no matter Biobase is imported or not).
L.
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All the data continuously generated in your IT infrastructure
contains a definitive record of customers, application performance,
security threats, fraudulent activity, and more. Splunk takes this
data and makes sense of it. IT sense. And common sense.
http://p.sf.net/sfu/splunk-novd2d
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