Hey everybody, I have a problem with installing the package lrslib-062+autotools-2017-03-03.p1 for sage. I work on an Macbook with an Intelprocessor and MacOSX Big Sur, 11.1. I also installed every package recommended for sage.
Can you help me fix the problem or at least say what the problem is? The log-file of the problem is appended. Thanks for helping! Lisa -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-devel/c10daea1-d3c7-437c-aef5-43eac70296ddn%40googlegroups.com.
Found local metadata for lrslib-062+autotools-2017-03-03.p1 Attempting to download package lrslib-062+autotools-2017-03-03.tar.gz from mirrors https://mirror.dogado.de/sage/spkg/upstream/lrslib/lrslib-062+autotools-2017-03-03.tar.gz [......................................................................] lrslib-062+autotools-2017-03-03.p1 ==================================================== Setting up build directory for lrslib-062+autotools-2017-03-03.p1 Finished extraction No patch files found in ../patches **************************************************** Host system: Darwin Lisa-Maries-MBP.fritz.box 20.2.0 Darwin Kernel Version 20.2.0: Wed Dec 2 20:39:59 PST 2020; root:xnu-7195.60.75~1/RELEASE_X86_64 x86_64 **************************************************** C compiler: gcc C compiler version: Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/c++/4.2.1 Apple clang version 12.0.0 (clang-1200.0.32.28) Target: x86_64-apple-darwin20.2.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin **************************************************** Package 'lrslib' is currently not installed No legacy uninstaller found for 'lrslib'; nothing to do Configuring lrslib-062+autotools-2017-03-03.p1 configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... ./install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... none checking build system type... x86_64-apple-darwin20.2.0 checking host system type... x86_64-apple-darwin20.2.0 checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 786432 checking how to convert x86_64-apple-darwin20.2.0 file names to x86_64-apple-darwin20.2.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin20.2.0 file names to toolchain format... func_convert_file_noop checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fno-common -DPIC checking if gcc PIC flag -fno-common -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking size of long... 8 checking whether we are using the GNU C++ compiler... yes checking whether g++ -std=gnu++11 accepts -g... yes checking dependency style of g++ -std=gnu++11... none checking how to run the C++ preprocessor... g++ -std=gnu++11 -E checking for ld used by g++ -std=gnu++11... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes checking if g++ -std=gnu++11 static flag -static works... no checking if g++ -std=gnu++11 supports -c -o file.o... yes checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking for boostlib >= 1.51... yes checking whether the Boost::System library is available... yes checking whether the Boost::Thread library is available... no configure: Will not build plrs because Boost (including Boost::System, Boost::Thread) was not found checking for mpic++... no checking for mpicxx... no checking for mpiCC... no checking for hcp... no checking for mpxlC_r... no checking for mpxlC... no checking for mpCC... no checking for cmpic++... no checking for MPI_Init... no checking for MPI_Init in -lmpi... no checking for MPI_Init in -lmpich... no configure: Will not build mplrs because MPI C++ compiler was not found checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating mplrs/Makefile config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode Building lrslib-062+autotools-2017-03-03.p1 Making all in . /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -g -O2 -c -o liblrsgmp_la-lrslib.lo `test -f 'lrslib.c' || echo './'`lrslib.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -g -O2 -c lrslib.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrslib.o In file included from lrslib.c:27: ./lrslib.h:3:9: warning: 'VERSION' macro redefined [-Wmacro-redefined] #define VERSION "v.6.2 2016.3.28" ^ <command line>:8:9: note: previous definition is here #define VERSION "062+autotools-2017-03-03" ^ 1 warning generated. libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -g -O2 -c lrslib.c -o liblrsgmp_la-lrslib.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -g -O2 -c -o liblrsgmp_la-lrsgmp.lo `test -f 'lrsgmp.c' || echo './'`lrsgmp.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -g -O2 -c lrsgmp.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrsgmp.o libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -g -O2 -c lrsgmp.c -o liblrsgmp_la-lrsgmp.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -version-info 0:0:0 -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -Wl,-rpath,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -o liblrsgmp.la -rpath /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib liblrsgmp_la-lrslib.lo liblrsgmp_la-lrsgmp.lo -lgmp libtool: link: gcc -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/liblrsgmp.0.dylib .libs/liblrsgmp_la-lrslib.o .libs/liblrsgmp_la-lrsgmp.o -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -lgmp -g -O2 -Wl,-rpath -Wl,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -install_name /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib/liblrsgmp.0.dylib -compatibility_version 1 -current_version 1.0 -Wl,-single_module libtool: link: (cd ".libs" && rm -f "liblrsgmp.dylib" && ln -s "liblrsgmp.0.dylib" "liblrsgmp.dylib") libtool: link: ar cru .libs/liblrsgmp.a liblrsgmp_la-lrslib.o liblrsgmp_la-lrsgmp.o libtool: link: ranlib .libs/liblrsgmp.a libtool: link: ( cd ".libs" && rm -f "liblrsgmp.la" && ln -s "../liblrsgmp.la" "liblrsgmp.la" ) gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DTIMES -DSIGNALS -DLRS_QUIET -g -O2 -c -o 2nash.o 2nash.c 2nash.c:57:41: warning: data argument not used by format string [-Wformat-extra-args] printf("output file: out\n", argv[2], argv[1]); ~~~~~~~~~~~~~~~~~~~~ ^ 2nash.c:68:5: error: implicit declaration of function 'kill' is invalid in C99 [-Werror,-Wimplicit-function-declaration] kill(0,9); ^ 1 warning and 1 error generated. make[4]: *** [2nash.o] Error 1 make[3]: *** [all-recursive] Error 1 ******************************************************************************** Error building lrslib-062+autotools-2017-03-03.p1 ******************************************************************************** real 0m14.919s user 0m7.619s sys 0m5.501s ************************************************************************ Error installing package lrslib-062+autotools-2017-03-03.p1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /Applications/SageMath-9.2.app/Contents/Resources/sage/logs/pkgs/lrslib-062+autotools-2017-03-03.p1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1' && '/Applications/SageMath-9.2.app/Contents/Resources/sage/sage' --buildsh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for lrslib-062+autotools-2017-03-03.p1 Using cached file /Applications/SageMath-9.2.app/Contents/Resources/sage/upstream/lrslib-062+autotools-2017-03-03.tar.gz lrslib-062+autotools-2017-03-03.p1 ==================================================== Setting up build directory for lrslib-062+autotools-2017-03-03.p1 Finished extraction No patch files found in ../patches **************************************************** Host system: Darwin Lisa-Maries-MBP.fritz.box 20.2.0 Darwin Kernel Version 20.2.0: Wed Dec 2 20:39:59 PST 2020; root:xnu-7195.60.75~1/RELEASE_X86_64 x86_64 **************************************************** C compiler: gcc C compiler version: Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/c++/4.2.1 Apple clang version 12.0.0 (clang-1200.0.32.28) Target: x86_64-apple-darwin20.2.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin **************************************************** Package 'lrslib' is currently not installed No legacy uninstaller found for 'lrslib'; nothing to do Configuring lrslib-062+autotools-2017-03-03.p1 configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... ./install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... none checking build system type... x86_64-apple-darwin20.2.0 checking host system type... x86_64-apple-darwin20.2.0 checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 786432 checking how to convert x86_64-apple-darwin20.2.0 file names to x86_64-apple-darwin20.2.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin20.2.0 file names to toolchain format... func_convert_file_noop checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fno-common -DPIC checking if gcc PIC flag -fno-common -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking size of long... 8 checking whether we are using the GNU C++ compiler... yes checking whether g++ -std=gnu++11 accepts -g... yes checking dependency style of g++ -std=gnu++11... none checking how to run the C++ preprocessor... g++ -std=gnu++11 -E checking for ld used by g++ -std=gnu++11... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes checking if g++ -std=gnu++11 static flag -static works... no checking if g++ -std=gnu++11 supports -c -o file.o... yes checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking for boostlib >= 1.51... yes checking whether the Boost::System library is available... yes checking whether the Boost::Thread library is available... no configure: Will not build plrs because Boost (including Boost::System, Boost::Thread) was not found checking for mpic++... no checking for mpicxx... no checking for mpiCC... no checking for hcp... no checking for mpxlC_r... no checking for mpxlC... no checking for mpCC... no checking for cmpic++... no checking for MPI_Init... no checking for MPI_Init in -lmpi... no checking for MPI_Init in -lmpich... no configure: Will not build mplrs because MPI C++ compiler was not found checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating mplrs/Makefile config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode Building lrslib-062+autotools-2017-03-03.p1 Making all in . /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -g -O2 -c -o liblrsgmp_la-lrslib.lo `test -f 'lrslib.c' || echo './'`lrslib.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -g -O2 -c lrslib.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrslib.o In file included from lrslib.c:27: ./lrslib.h:3:9: warning: 'VERSION' macro redefined [-Wmacro-redefined] #define VERSION "v.6.2 2016.3.28" ^ <command line>:8:9: note: previous definition is here #define VERSION "062+autotools-2017-03-03" ^ 1 warning generated. libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -g -O2 -c lrslib.c -o liblrsgmp_la-lrslib.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -g -O2 -c -o liblrsgmp_la-lrsgmp.lo `test -f 'lrsgmp.c' || echo './'`lrsgmp.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -g -O2 -c lrsgmp.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrsgmp.o libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -g -O2 -c lrsgmp.c -o liblrsgmp_la-lrsgmp.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -version-info 0:0:0 -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -Wl,-rpath,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -o liblrsgmp.la -rpath /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib liblrsgmp_la-lrslib.lo liblrsgmp_la-lrsgmp.lo -lgmp libtool: link: gcc -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/liblrsgmp.0.dylib .libs/liblrsgmp_la-lrslib.o .libs/liblrsgmp_la-lrsgmp.o -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -lgmp -g -O2 -Wl,-rpath -Wl,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -install_name /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib/liblrsgmp.0.dylib -compatibility_version 1 -current_version 1.0 -Wl,-single_module libtool: link: (cd ".libs" && rm -f "liblrsgmp.dylib" && ln -s "liblrsgmp.0.dylib" "liblrsgmp.dylib") libtool: link: ar cru .libs/liblrsgmp.a liblrsgmp_la-lrslib.o liblrsgmp_la-lrsgmp.o libtool: link: ranlib .libs/liblrsgmp.a libtool: link: ( cd ".libs" && rm -f "liblrsgmp.la" && ln -s "../liblrsgmp.la" "liblrsgmp.la" ) gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DTIMES -DSIGNALS -DLRS_QUIET -g -O2 -c -o 2nash.o 2nash.c 2nash.c:57:41: warning: data argument not used by format string [-Wformat-extra-args] printf("output file: out\n", argv[2], argv[1]); ~~~~~~~~~~~~~~~~~~~~ ^ 2nash.c:68:5: error: implicit declaration of function 'kill' is invalid in C99 [-Werror,-Wimplicit-function-declaration] kill(0,9); ^ 1 warning and 1 error generated. make[4]: *** [2nash.o] Error 1 make[3]: *** [all-recursive] Error 1 ******************************************************************************** Error building lrslib-062+autotools-2017-03-03.p1 ******************************************************************************** real 0m14.475s user 0m7.566s sys 0m5.328s ************************************************************************ Error installing package lrslib-062+autotools-2017-03-03.p1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /Applications/SageMath-9.2.app/Contents/Resources/sage/logs/pkgs/lrslib-062+autotools-2017-03-03.p1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1' && '/Applications/SageMath-9.2.app/Contents/Resources/sage/sage' --buildsh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for lrslib-062+autotools-2017-03-03.p1 Using cached file /Applications/SageMath-9.2.app/Contents/Resources/sage/upstream/lrslib-062+autotools-2017-03-03.tar.gz lrslib-062+autotools-2017-03-03.p1 ==================================================== Setting up build directory for lrslib-062+autotools-2017-03-03.p1 Finished extraction No patch files found in ../patches **************************************************** Host system: Darwin Lisa-Maries-MBP.fritz.box 20.2.0 Darwin Kernel Version 20.2.0: Wed Dec 2 20:39:59 PST 2020; root:xnu-7195.60.75~1/RELEASE_X86_64 x86_64 **************************************************** C compiler: gcc C compiler version: Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/c++/4.2.1 Apple clang version 12.0.0 (clang-1200.0.32.28) Target: x86_64-apple-darwin20.2.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin **************************************************** Package 'lrslib' is currently not installed No legacy uninstaller found for 'lrslib'; nothing to do Configuring lrslib-062+autotools-2017-03-03.p1 configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/local/bin/ginstall -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/local/bin/gmkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... none checking build system type... x86_64-apple-darwin20.2.0 checking host system type... x86_64-apple-darwin20.2.0 checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 786432 checking how to convert x86_64-apple-darwin20.2.0 file names to x86_64-apple-darwin20.2.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin20.2.0 file names to toolchain format... func_convert_file_noop checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fno-common -DPIC checking if gcc PIC flag -fno-common -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking size of long... 8 checking whether we are using the GNU C++ compiler... yes checking whether g++ -std=gnu++11 accepts -g... yes checking dependency style of g++ -std=gnu++11... none checking how to run the C++ preprocessor... g++ -std=gnu++11 -E checking for ld used by g++ -std=gnu++11... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes checking if g++ -std=gnu++11 static flag -static works... no checking if g++ -std=gnu++11 supports -c -o file.o... yes checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking for boostlib >= 1.51... yes checking whether the Boost::System library is available... yes checking whether the Boost::Thread library is available... no configure: Will not build plrs because Boost (including Boost::System, Boost::Thread) was not found checking for mpic++... no checking for mpicxx... no checking for mpiCC... no checking for hcp... no checking for mpxlC_r... no checking for mpxlC... no checking for mpCC... no checking for cmpic++... no checking for MPI_Init... no checking for MPI_Init in -lmpi... no checking for MPI_Init in -lmpich... no configure: Will not build mplrs because MPI C++ compiler was not found checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating mplrs/Makefile config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode Building lrslib-062+autotools-2017-03-03.p1 Making all in . /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -I/usr/local/opt/zlib/include -g -O2 -c -o liblrsgmp_la-lrslib.lo `test -f 'lrslib.c' || echo './'`lrslib.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/zlib/include -g -O2 -c lrslib.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrslib.o In file included from lrslib.c:27: ./lrslib.h:3:9: warning: 'VERSION' macro redefined [-Wmacro-redefined] #define VERSION "v.6.2 2016.3.28" ^ <command line>:8:9: note: previous definition is here #define VERSION "062+autotools-2017-03-03" ^ 1 warning generated. libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/zlib/include -g -O2 -c lrslib.c -o liblrsgmp_la-lrslib.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -I/usr/local/opt/zlib/include -g -O2 -c -o liblrsgmp_la-lrsgmp.lo `test -f 'lrsgmp.c' || echo './'`lrsgmp.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/zlib/include -g -O2 -c lrsgmp.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrsgmp.o libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/zlib/include -g -O2 -c lrsgmp.c -o liblrsgmp_la-lrsgmp.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -version-info 0:0:0 -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -Wl,-rpath,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -L/usr/local/opt/zlib/lib -o liblrsgmp.la -rpath /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib liblrsgmp_la-lrslib.lo liblrsgmp_la-lrsgmp.lo -lgmp libtool: link: gcc -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/liblrsgmp.0.dylib .libs/liblrsgmp_la-lrslib.o .libs/liblrsgmp_la-lrsgmp.o -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -L/usr/local/opt/zlib/lib -lgmp -g -O2 -Wl,-rpath -Wl,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -install_name /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib/liblrsgmp.0.dylib -compatibility_version 1 -current_version 1.0 -Wl,-single_module libtool: link: (cd ".libs" && rm -f "liblrsgmp.dylib" && ln -s "liblrsgmp.0.dylib" "liblrsgmp.dylib") libtool: link: ar cru .libs/liblrsgmp.a liblrsgmp_la-lrslib.o liblrsgmp_la-lrsgmp.o libtool: link: ranlib .libs/liblrsgmp.a libtool: link: ( cd ".libs" && rm -f "liblrsgmp.la" && ln -s "../liblrsgmp.la" "liblrsgmp.la" ) gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DTIMES -DSIGNALS -DLRS_QUIET -I/usr/local/opt/zlib/include -g -O2 -c -o 2nash.o 2nash.c 2nash.c:57:41: warning: data argument not used by format string [-Wformat-extra-args] printf("output file: out\n", argv[2], argv[1]); ~~~~~~~~~~~~~~~~~~~~ ^ 2nash.c:68:5: error: implicit declaration of function 'kill' is invalid in C99 [-Werror,-Wimplicit-function-declaration] kill(0,9); ^ 1 warning and 1 error generated. make[4]: *** [2nash.o] Error 1 make[3]: *** [all-recursive] Error 1 ******************************************************************************** Error building lrslib-062+autotools-2017-03-03.p1 ******************************************************************************** real 0m15.475s user 0m7.647s sys 0m5.074s ************************************************************************ Error installing package lrslib-062+autotools-2017-03-03.p1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /Applications/SageMath-9.2.app/Contents/Resources/sage/logs/pkgs/lrslib-062+autotools-2017-03-03.p1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1' && '/Applications/SageMath-9.2.app/Contents/Resources/sage/sage' --buildsh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for lrslib-062+autotools-2017-03-03.p1 Using cached file /Applications/SageMath-9.2.app/Contents/Resources/sage/upstream/lrslib-062+autotools-2017-03-03.tar.gz lrslib-062+autotools-2017-03-03.p1 ==================================================== Setting up build directory for lrslib-062+autotools-2017-03-03.p1 Finished extraction No patch files found in ../patches **************************************************** Host system: Darwin Lisa-Maries-MBP.fritz.box 20.2.0 Darwin Kernel Version 20.2.0: Wed Dec 2 20:39:59 PST 2020; root:xnu-7195.60.75~1/RELEASE_X86_64 x86_64 **************************************************** C compiler: gcc C compiler version: Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/c++/4.2.1 Apple clang version 12.0.0 (clang-1200.0.32.28) Target: x86_64-apple-darwin20.2.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin **************************************************** Package 'lrslib' is currently not installed No legacy uninstaller found for 'lrslib'; nothing to do Configuring lrslib-062+autotools-2017-03-03.p1 configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/local/bin/ginstall -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/local/bin/gmkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... none checking build system type... x86_64-apple-darwin20.2.0 checking host system type... x86_64-apple-darwin20.2.0 checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 786432 checking how to convert x86_64-apple-darwin20.2.0 file names to x86_64-apple-darwin20.2.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin20.2.0 file names to toolchain format... func_convert_file_noop checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fno-common -DPIC checking if gcc PIC flag -fno-common -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking size of long... 8 checking whether we are using the GNU C++ compiler... yes checking whether g++ -std=gnu++11 accepts -g... yes checking dependency style of g++ -std=gnu++11... none checking how to run the C++ preprocessor... g++ -std=gnu++11 -E checking for ld used by g++ -std=gnu++11... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes checking if g++ -std=gnu++11 static flag -static works... no checking if g++ -std=gnu++11 supports -c -o file.o... yes checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking for boostlib >= 1.51... yes checking whether the Boost::System library is available... yes checking whether the Boost::Thread library is available... no configure: Will not build plrs because Boost (including Boost::System, Boost::Thread) was not found checking for mpic++... no checking for mpicxx... no checking for mpiCC... no checking for hcp... no checking for mpxlC_r... no checking for mpxlC... no checking for mpCC... no checking for cmpic++... no checking for MPI_Init... no checking for MPI_Init in -lmpi... no checking for MPI_Init in -lmpich... no configure: Will not build mplrs because MPI C++ compiler was not found checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating mplrs/Makefile config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode Building lrslib-062+autotools-2017-03-03.p1 Making all in . /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c -o liblrsgmp_la-lrslib.lo `test -f 'lrslib.c' || echo './'`lrslib.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrslib.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrslib.o In file included from lrslib.c:27: ./lrslib.h:3:9: warning: 'VERSION' macro redefined [-Wmacro-redefined] #define VERSION "v.6.2 2016.3.28" ^ <command line>:8:9: note: previous definition is here #define VERSION "062+autotools-2017-03-03" ^ 1 warning generated. libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrslib.c -o liblrsgmp_la-lrslib.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c -o liblrsgmp_la-lrsgmp.lo `test -f 'lrsgmp.c' || echo './'`lrsgmp.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrsgmp.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrsgmp.o libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrsgmp.c -o liblrsgmp_la-lrsgmp.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -version-info 0:0:0 -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -Wl,-rpath,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -L/usr/local/opt/readline/lib -o liblrsgmp.la -rpath /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib liblrsgmp_la-lrslib.lo liblrsgmp_la-lrsgmp.lo -lgmp libtool: link: gcc -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/liblrsgmp.0.dylib .libs/liblrsgmp_la-lrslib.o .libs/liblrsgmp_la-lrsgmp.o -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -L/usr/local/opt/readline/lib -lgmp -g -O2 -Wl,-rpath -Wl,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -install_name /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib/liblrsgmp.0.dylib -compatibility_version 1 -current_version 1.0 -Wl,-single_module libtool: link: (cd ".libs" && rm -f "liblrsgmp.dylib" && ln -s "liblrsgmp.0.dylib" "liblrsgmp.dylib") libtool: link: ar cru .libs/liblrsgmp.a liblrsgmp_la-lrslib.o liblrsgmp_la-lrsgmp.o libtool: link: ranlib .libs/liblrsgmp.a libtool: link: ( cd ".libs" && rm -f "liblrsgmp.la" && ln -s "../liblrsgmp.la" "liblrsgmp.la" ) gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DTIMES -DSIGNALS -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c -o 2nash.o 2nash.c 2nash.c:57:41: warning: data argument not used by format string [-Wformat-extra-args] printf("output file: out\n", argv[2], argv[1]); ~~~~~~~~~~~~~~~~~~~~ ^ 2nash.c:68:5: error: implicit declaration of function 'kill' is invalid in C99 [-Werror,-Wimplicit-function-declaration] kill(0,9); ^ 1 warning and 1 error generated. make[4]: *** [2nash.o] Error 1 make[3]: *** [all-recursive] Error 1 ******************************************************************************** Error building lrslib-062+autotools-2017-03-03.p1 ******************************************************************************** real 0m17.121s user 0m8.121s sys 0m5.795s ************************************************************************ Error installing package lrslib-062+autotools-2017-03-03.p1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /Applications/SageMath-9.2.app/Contents/Resources/sage/logs/pkgs/lrslib-062+autotools-2017-03-03.p1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1' && '/Applications/SageMath-9.2.app/Contents/Resources/sage/sage' --buildsh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for lrslib-062+autotools-2017-03-03.p1 Using cached file /Applications/SageMath-9.2.app/Contents/Resources/sage/upstream/lrslib-062+autotools-2017-03-03.tar.gz lrslib-062+autotools-2017-03-03.p1 ==================================================== Setting up build directory for lrslib-062+autotools-2017-03-03.p1 Finished extraction No patch files found in ../patches **************************************************** Host system: Darwin Lisa-Maries-MBP.fritz.box 20.2.0 Darwin Kernel Version 20.2.0: Wed Dec 2 20:39:59 PST 2020; root:xnu-7195.60.75~1/RELEASE_X86_64 x86_64 **************************************************** C compiler: gcc C compiler version: Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/c++/4.2.1 Apple clang version 12.0.0 (clang-1200.0.32.28) Target: x86_64-apple-darwin20.2.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin **************************************************** Package 'lrslib' is currently not installed No legacy uninstaller found for 'lrslib'; nothing to do Configuring lrslib-062+autotools-2017-03-03.p1 configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/local/bin/ginstall -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/local/bin/gmkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... none checking build system type... x86_64-apple-darwin20.2.0 checking host system type... x86_64-apple-darwin20.2.0 checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 786432 checking how to convert x86_64-apple-darwin20.2.0 file names to x86_64-apple-darwin20.2.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin20.2.0 file names to toolchain format... func_convert_file_noop checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fno-common -DPIC checking if gcc PIC flag -fno-common -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking size of long... 8 checking whether we are using the GNU C++ compiler... yes checking whether g++ -std=gnu++11 accepts -g... yes checking dependency style of g++ -std=gnu++11... none checking how to run the C++ preprocessor... g++ -std=gnu++11 -E checking for ld used by g++ -std=gnu++11... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes checking if g++ -std=gnu++11 static flag -static works... no checking if g++ -std=gnu++11 supports -c -o file.o... yes checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking for boostlib >= 1.51... yes checking whether the Boost::System library is available... yes checking whether the Boost::Thread library is available... no configure: Will not build plrs because Boost (including Boost::System, Boost::Thread) was not found checking for mpic++... no checking for mpicxx... no checking for mpiCC... no checking for hcp... no checking for mpxlC_r... no checking for mpxlC... no checking for mpCC... no checking for cmpic++... no checking for MPI_Init... no checking for MPI_Init in -lmpi... no checking for MPI_Init in -lmpich... no configure: Will not build mplrs because MPI C++ compiler was not found checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating mplrs/Makefile config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode Building lrslib-062+autotools-2017-03-03.p1 Making all in . /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c -o liblrsgmp_la-lrslib.lo `test -f 'lrslib.c' || echo './'`lrslib.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrslib.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrslib.o In file included from lrslib.c:27: ./lrslib.h:3:9: warning: 'VERSION' macro redefined [-Wmacro-redefined] #define VERSION "v.6.2 2016.3.28" ^ <command line>:8:9: note: previous definition is here #define VERSION "062+autotools-2017-03-03" ^ 1 warning generated. libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrslib.c -o liblrsgmp_la-lrslib.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c -o liblrsgmp_la-lrsgmp.lo `test -f 'lrsgmp.c' || echo './'`lrsgmp.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrsgmp.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrsgmp.o libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrsgmp.c -o liblrsgmp_la-lrsgmp.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -version-info 0:0:0 -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -Wl,-rpath,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -L/usr/local/opt/readline/lib -o liblrsgmp.la -rpath /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib liblrsgmp_la-lrslib.lo liblrsgmp_la-lrsgmp.lo -lgmp libtool: link: gcc -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/liblrsgmp.0.dylib .libs/liblrsgmp_la-lrslib.o .libs/liblrsgmp_la-lrsgmp.o -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -L/usr/local/opt/readline/lib -lgmp -g -O2 -Wl,-rpath -Wl,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -install_name /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib/liblrsgmp.0.dylib -compatibility_version 1 -current_version 1.0 -Wl,-single_module libtool: link: (cd ".libs" && rm -f "liblrsgmp.dylib" && ln -s "liblrsgmp.0.dylib" "liblrsgmp.dylib") libtool: link: ar cru .libs/liblrsgmp.a liblrsgmp_la-lrslib.o liblrsgmp_la-lrsgmp.o libtool: link: ranlib .libs/liblrsgmp.a libtool: link: ( cd ".libs" && rm -f "liblrsgmp.la" && ln -s "../liblrsgmp.la" "liblrsgmp.la" ) gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DTIMES -DSIGNALS -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c -o 2nash.o 2nash.c 2nash.c:57:41: warning: data argument not used by format string [-Wformat-extra-args] printf("output file: out\n", argv[2], argv[1]); ~~~~~~~~~~~~~~~~~~~~ ^ 2nash.c:68:5: error: implicit declaration of function 'kill' is invalid in C99 [-Werror,-Wimplicit-function-declaration] kill(0,9); ^ 1 warning and 1 error generated. make[4]: *** [2nash.o] Error 1 make[3]: *** [all-recursive] Error 1 ******************************************************************************** Error building lrslib-062+autotools-2017-03-03.p1 ******************************************************************************** real 0m17.605s user 0m8.488s sys 0m6.136s ************************************************************************ Error installing package lrslib-062+autotools-2017-03-03.p1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /Applications/SageMath-9.2.app/Contents/Resources/sage/logs/pkgs/lrslib-062+autotools-2017-03-03.p1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1' && '/Applications/SageMath-9.2.app/Contents/Resources/sage/sage' --buildsh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Found local metadata for lrslib-062+autotools-2017-03-03.p1 Using cached file /Applications/SageMath-9.2.app/Contents/Resources/sage/upstream/lrslib-062+autotools-2017-03-03.tar.gz lrslib-062+autotools-2017-03-03.p1 ==================================================== Setting up build directory for lrslib-062+autotools-2017-03-03.p1 Finished extraction No patch files found in ../patches **************************************************** Host system: Darwin Lisa-Maries-MBP.fritz.box 20.2.0 Darwin Kernel Version 20.2.0: Wed Dec 2 20:39:59 PST 2020; root:xnu-7195.60.75~1/RELEASE_X86_64 x86_64 **************************************************** C compiler: gcc C compiler version: Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/c++/4.2.1 Apple clang version 12.0.0 (clang-1200.0.32.28) Target: x86_64-apple-darwin20.2.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin **************************************************** Package 'lrslib' is currently not installed No legacy uninstaller found for 'lrslib'; nothing to do Configuring lrslib-062+autotools-2017-03-03.p1 configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/local/bin/ginstall -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/local/bin/gmkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... none checking build system type... x86_64-apple-darwin20.2.0 checking host system type... x86_64-apple-darwin20.2.0 checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 786432 checking how to convert x86_64-apple-darwin20.2.0 file names to x86_64-apple-darwin20.2.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin20.2.0 file names to toolchain format... func_convert_file_noop checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fno-common -DPIC checking if gcc PIC flag -fno-common -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking size of long... 8 checking whether we are using the GNU C++ compiler... yes checking whether g++ -std=gnu++11 accepts -g... yes checking dependency style of g++ -std=gnu++11... none checking how to run the C++ preprocessor... g++ -std=gnu++11 -E checking for ld used by g++ -std=gnu++11... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes checking if g++ -std=gnu++11 static flag -static works... no checking if g++ -std=gnu++11 supports -c -o file.o... yes checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes checking whether the g++ -std=gnu++11 linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin20.2.0 dyld checking how to hardcode library paths into programs... immediate checking for boostlib >= 1.51... yes checking whether the Boost::System library is available... yes checking whether the Boost::Thread library is available... no configure: Will not build plrs because Boost (including Boost::System, Boost::Thread) was not found checking for mpic++... no checking for mpicxx... no checking for mpiCC... no checking for hcp... no checking for mpxlC_r... no checking for mpxlC... no checking for mpCC... no checking for cmpic++... no checking for MPI_Init... no checking for MPI_Init in -lmpi... no checking for MPI_Init in -lmpich... no configure: Will not build mplrs because MPI C++ compiler was not found checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating mplrs/Makefile config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode Building lrslib-062+autotools-2017-03-03.p1 Making all in . /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c -o liblrsgmp_la-lrslib.lo `test -f 'lrslib.c' || echo './'`lrslib.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrslib.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrslib.o In file included from lrslib.c:27: ./lrslib.h:3:9: warning: 'VERSION' macro redefined [-Wmacro-redefined] #define VERSION "v.6.2 2016.3.28" ^ <command line>:8:9: note: previous definition is here #define VERSION "062+autotools-2017-03-03" ^ 1 warning generated. libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrslib.c -o liblrsgmp_la-lrslib.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c -o liblrsgmp_la-lrsgmp.lo `test -f 'lrsgmp.c' || echo './'`lrsgmp.c libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrsgmp.c -fno-common -DPIC -o .libs/liblrsgmp_la-lrsgmp.o libtool: compile: gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" "-DPACKAGE_STRING=\"lrslib 062+autotools-2017-03-03\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 "-DHAVE_BOOST=/**/" -I. -DGMP -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c lrsgmp.c -o liblrsgmp_la-lrsgmp.o >/dev/null 2>&1 /usr/local/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -version-info 0:0:0 -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -Wl,-rpath,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -L/usr/local/opt/readline/lib -o liblrsgmp.la -rpath /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib liblrsgmp_la-lrslib.lo liblrsgmp_la-lrsgmp.lo -lgmp libtool: link: gcc -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/liblrsgmp.0.dylib .libs/liblrsgmp_la-lrslib.o .libs/liblrsgmp_la-lrsgmp.o -L/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -L/usr/local/opt/readline/lib -lgmp -g -O2 -Wl,-rpath -Wl,/Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib -install_name /Applications/SageMath-9.2.app/Contents/Resources/sage/local/lib/liblrsgmp.0.dylib -compatibility_version 1 -current_version 1.0 -Wl,-single_module libtool: link: (cd ".libs" && rm -f "liblrsgmp.dylib" && ln -s "liblrsgmp.0.dylib" "liblrsgmp.dylib") libtool: link: ar cru .libs/liblrsgmp.a liblrsgmp_la-lrslib.o liblrsgmp_la-lrsgmp.o libtool: link: ranlib .libs/liblrsgmp.a libtool: link: ( cd ".libs" && rm -f "liblrsgmp.la" && ln -s "../liblrsgmp.la" "liblrsgmp.la" ) gcc -DPACKAGE_NAME=\"lrslib\" -DPACKAGE_TARNAME=\"lrslib\" -DPACKAGE_VERSION=\"062+autotools-2017-03-03\" -DPACKAGE_STRING=\"lrslib\ 062+autotools-2017-03-03\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"lrslib\" -DVERSION=\"062+autotools-2017-03-03\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DSIZEOF_LONG=8 -DHAVE_BOOST=/\*\*/ -I. -DTIMES -DSIGNALS -DLRS_QUIET -I/usr/local/opt/readline/include -g -O2 -c -o 2nash.o 2nash.c 2nash.c:57:41: warning: data argument not used by format string [-Wformat-extra-args] printf("output file: out\n", argv[2], argv[1]); ~~~~~~~~~~~~~~~~~~~~ ^ 2nash.c:68:5: error: implicit declaration of function 'kill' is invalid in C99 [-Werror,-Wimplicit-function-declaration] kill(0,9); ^ 1 warning and 1 error generated. make[4]: *** [2nash.o] Error 1 make[3]: *** [all-recursive] Error 1 ******************************************************************************** Error building lrslib-062+autotools-2017-03-03.p1 ******************************************************************************** real 0m15.508s user 0m8.364s sys 0m5.883s ************************************************************************ Error installing package lrslib-062+autotools-2017-03-03.p1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log file /Applications/SageMath-9.2.app/Contents/Resources/sage/logs/pkgs/lrslib-062+autotools-2017-03-03.p1.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/Applications/SageMath-9.2.app/Contents/Resources/sage/local/var/tmp/sage/build/lrslib-062+autotools-2017-03-03.p1' && '/Applications/SageMath-9.2.app/Contents/Resources/sage/sage' --buildsh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************
