Hi, My build of sage-9.5.beta7 on a Fedora 35 system (x86_64) failed: * package: cysignals-1.10.3 last build time: Nov 22 11:13
* package: pyzmq-22.2.1 last build time: Nov 22 11:13 Logs attached to this message. By the way, they've been installed as Fedora packages: [root@peart-furu-or-jp furutaka]# dnf list installed \*zmq\* \*cysignals\* Installed Packages czmq.x86_64 4.2.1-6.fc34 @fedora czmq-devel.x86_64 4.2.1-6.fc34 @fedora python3-cysignals.x86_64 1.10.3-2.fc35 @fedora python3-cysignals-devel.x86_64 1.10.3-2.fc35 @fedora python3-zmq.x86_64 22.2.1-1.fc35 @fedora python3-zmq-tests.x86_64 22.2.1-1.fc35 @fedora -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-devel/392b7480-e729-48cb-ab98-8cb9af2ce7b0n%40googlegroups.com.
Attempting to download package pyzmq-22.2.1.tar.gz from mirrors http://ftp.riken.jp/sagemath/spkg/upstream/pyzmq/pyzmq-22.2.1.tar.gz [......................................................................] pyzmq-22.2.1 ==================================================== Setting up build directory for pyzmq-22.2.1 Finished extraction No patch files found in ../patches **************************************************** Host system: Linux peart-furu-or-jp 5.14.17-301.fc35.x86_64 #1 SMP Mon Nov 8 13:57:43 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/11/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-redhat-linux Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,objc,obj-c++,ada,go,d,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl=/builddir/build/BUILD/gcc-11.2.1-20210728/obj-x86_64-redhat-linux/isl-install --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux --with-build-config=bootstrap-lto --enable-link-serialization=1 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.1 20210728 (Red Hat 11.2.1-1) (GCC) **************************************************** Package 'pyzmq' is currently not installed No legacy uninstaller found for 'pyzmq'; nothing to do Installing pyzmq-22.2.1 Processing /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/pyzmq-22.2.1/src Preparing wheel metadata: started Running command /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/bin/python3 /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpwbq63fxw /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/lib/python3.9/site-packages/setuptools/_distutils/dist.py:275: UserWarning: Unknown distribution option: 'cffi_modules' warnings.warn(msg) running dist_info creating /tmp/pip-modern-metadata-2h9ffp55/pyzmq.egg-info writing /tmp/pip-modern-metadata-2h9ffp55/pyzmq.egg-info/PKG-INFO writing dependency_links to /tmp/pip-modern-metadata-2h9ffp55/pyzmq.egg-info/dependency_links.txt writing requirements to /tmp/pip-modern-metadata-2h9ffp55/pyzmq.egg-info/requires.txt writing top-level names to /tmp/pip-modern-metadata-2h9ffp55/pyzmq.egg-info/top_level.txt writing manifest file '/tmp/pip-modern-metadata-2h9ffp55/pyzmq.egg-info/SOURCES.txt' running configure Settings obtained from pkg-config: {'library_dirs': [], 'include_dirs': [], 'libraries': ['zmq']} {'libraries': ['zmq'], 'include_dirs': [], 'library_dirs': [], 'runtime_library_dirs': [], 'extra_link_args': []} gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -c build/temp.linux-x86_64-3.9/scratch/check_sys_un.c -o build/temp.linux-x86_64-3.9/scratch/check_sys_un.o gcc build/temp.linux-x86_64-3.9/scratch/check_sys_un.o -o build/temp.linux-x86_64-3.9/scratch/check_sys_un Configure: Autodetecting ZMQ settings... Custom ZMQ dir: Checking for timer_create ** Errors about missing timer_create are a normal part of this process ** ************************************************ creating build/temp.linux-x86_64-3.9/scratch/tmp gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -c /tmp/timer_createvj0f52wt.c -o build/temp.linux-x86_64-3.9/scratch/tmp/timer_createvj0f52wt.o /tmp/timer_createvj0f52wt.c: In function 'main': /tmp/timer_createvj0f52wt.c:2:5: warning: implicit declaration of function 'timer_create' [-Wimplicit-function-declaration] 2 | timer_create(); | ^~~~~~~~~~~~ gcc build/temp.linux-x86_64-3.9/scratch/tmp/timer_createvj0f52wt.o -o build/temp.linux-x86_64-3.9/scratch/a.out error: [Errno 2] No such file or directory: 'a.out' Failed with default libzmq, trying again with /usr/local {'libraries': ['zmq'], 'include_dirs': ['/usr/local/include'], 'library_dirs': ['/usr/local/lib'], 'runtime_library_dirs': ['/usr/local/lib'], 'extra_link_args': []} Configure: Autodetecting ZMQ settings... Custom ZMQ dir: /usr/local Checking for timer_create ** Errors about missing timer_create are a normal part of this process ** ************************************************ gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -c /tmp/timer_createhl6kj4st.c -o build/temp.linux-x86_64-3.9/scratch/tmp/timer_createhl6kj4st.o /tmp/timer_createhl6kj4st.c: In function 'main': /tmp/timer_createhl6kj4st.c:2:5: warning: implicit declaration of function 'timer_create' [-Wimplicit-function-declaration] 2 | timer_create(); | ^~~~~~~~~~~~ Assembler messages: Fatal error: can't create build/temp.linux-x86_64-3.9/scratch/tmp/timer_createhl6kj4st.o: No such file or directory ** The above error about timer_create is normal and not a problem! ** no timer_create, linking librt gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -I/usr/local/include -Izmq/utils -c build/temp.linux-x86_64-3.9/scratch/vers.c -o build/temp.linux-x86_64-3.9/scratch/vers.o gcc build/temp.linux-x86_64-3.9/scratch/vers.o -L/usr/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lzmq -lrt -o build/temp.linux-x86_64-3.9/scratch/vers ZMQ version detected: 4.3.4 ************************************************ reading manifest file '/tmp/pip-modern-metadata-2h9ffp55/pyzmq.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'setupegg.py' warning: no files found matching 'tox.ini' warning: no files found matching '.travis.yml' no previously-included directories found matching 'docs/build' no previously-included directories found matching 'docs/gh-pages' warning: no directories found matching 'bundled/zeromq/tweetnacl' warning: no previously-included files found matching 'bundled/zeromq/src/Makefile*' warning: no previously-included files found matching 'bundled/zeromq/src/platform.hpp' warning: no previously-included files found matching 'zmq/libzmq*' warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files matching '.mailmap' found anywhere in distribution warning: no previously-included files matching 'Makefile.am' found anywhere in distribution warning: no previously-included files matching 'Makefile.in' found anywhere in distribution adding license file 'COPYING.BSD' adding license file 'COPYING.LESSER' adding license file 'AUTHORS.md' writing manifest file '/tmp/pip-modern-metadata-2h9ffp55/pyzmq.egg-info/SOURCES.txt' creating '/tmp/pip-modern-metadata-2h9ffp55/pyzmq.dist-info' adding license file "COPYING.BSD" (matched pattern "COPYING*") adding license file "COPYING.LESSER" (matched pattern "COPYING*") adding license file "AUTHORS.md" (matched pattern "AUTHORS*") Preparing wheel metadata: finished with status 'done' Building wheels for collected packages: pyzmq Building wheel for pyzmq (PEP 517): started Running command /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/bin/python3 /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmp0irgtoe1 /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/lib/python3.9/site-packages/setuptools/_distutils/dist.py:275: UserWarning: Unknown distribution option: 'cffi_modules' warnings.warn(msg) running bdist_wheel running build running build_py creating build/lib.linux-x86_64-3.9 creating build/lib.linux-x86_64-3.9/zmq copying zmq/_future.py -> build/lib.linux-x86_64-3.9/zmq copying zmq/decorators.py -> build/lib.linux-x86_64-3.9/zmq copying zmq/__init__.py -> build/lib.linux-x86_64-3.9/zmq copying zmq/error.py -> build/lib.linux-x86_64-3.9/zmq copying zmq/asyncio.py -> build/lib.linux-x86_64-3.9/zmq creating build/lib.linux-x86_64-3.9/zmq/green copying zmq/green/core.py -> build/lib.linux-x86_64-3.9/zmq/green copying zmq/green/__init__.py -> build/lib.linux-x86_64-3.9/zmq/green copying zmq/green/device.py -> build/lib.linux-x86_64-3.9/zmq/green copying zmq/green/poll.py -> build/lib.linux-x86_64-3.9/zmq/green creating build/lib.linux-x86_64-3.9/zmq/green/eventloop copying zmq/green/eventloop/zmqstream.py -> build/lib.linux-x86_64-3.9/zmq/green/eventloop copying zmq/green/eventloop/__init__.py -> build/lib.linux-x86_64-3.9/zmq/green/eventloop copying zmq/green/eventloop/ioloop.py -> build/lib.linux-x86_64-3.9/zmq/green/eventloop creating build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/win32.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/strtypes.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/__init__.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/jsonapi.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/constant_names.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/z85.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/monitor.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/garbage.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/interop.py -> build/lib.linux-x86_64-3.9/zmq/utils creating build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/context.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/socket.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/stopwatch.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/version.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/__init__.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/attrsettr.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/constants.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/frame.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/tracker.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/poll.py -> build/lib.linux-x86_64-3.9/zmq/sugar creating build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/basedevice.py -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/proxydevice.py -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/__init__.py -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/monitoredqueue.py -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/monitoredqueuedevice.py -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/proxysteerabledevice.py -> build/lib.linux-x86_64-3.9/zmq/devices creating build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_log.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_ioloop.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_z85.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_zmqstream.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_pubsub.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_multipart.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_win32_shim.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_context.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_draft.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_poll.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_future.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_cython.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_imports.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_retry_eintr.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_monqueue.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_cffi_backend.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/__init__.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_etc.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_reqrep.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_asyncio.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_constants.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_version.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_proxy_steerable.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_message.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_device.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_error.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_monitor.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_ssh.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_includes.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_auth.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/conftest.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_socket.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_decorators.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_mypy.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_pair.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_security.py -> build/lib.linux-x86_64-3.9/zmq/tests creating build/lib.linux-x86_64-3.9/zmq/log copying zmq/log/__main__.py -> build/lib.linux-x86_64-3.9/zmq/log copying zmq/log/handlers.py -> build/lib.linux-x86_64-3.9/zmq/log copying zmq/log/__init__.py -> build/lib.linux-x86_64-3.9/zmq/log creating build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/certs.py -> build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/thread.py -> build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/__init__.py -> build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/ioloop.py -> build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/base.py -> build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/asyncio.py -> build/lib.linux-x86_64-3.9/zmq/auth creating build/lib.linux-x86_64-3.9/zmq/backend copying zmq/backend/select.py -> build/lib.linux-x86_64-3.9/zmq/backend copying zmq/backend/__init__.py -> build/lib.linux-x86_64-3.9/zmq/backend creating build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/__init__.py -> build/lib.linux-x86_64-3.9/zmq/backend/cython creating build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/context.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/socket.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/devices.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/message.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/_poll.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/__init__.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/error.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/constants.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/utils.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi creating build/lib.linux-x86_64-3.9/zmq/eventloop copying zmq/eventloop/future.py -> build/lib.linux-x86_64-3.9/zmq/eventloop copying zmq/eventloop/zmqstream.py -> build/lib.linux-x86_64-3.9/zmq/eventloop copying zmq/eventloop/_deprecated.py -> build/lib.linux-x86_64-3.9/zmq/eventloop copying zmq/eventloop/__init__.py -> build/lib.linux-x86_64-3.9/zmq/eventloop copying zmq/eventloop/ioloop.py -> build/lib.linux-x86_64-3.9/zmq/eventloop creating build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/log.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/util.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/__init__.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/ioloop.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/stack_context.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/concurrent.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado creating build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/posix.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/auto.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/__init__.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/windows.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/common.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/interface.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform creating build/lib.linux-x86_64-3.9/zmq/ssh copying zmq/ssh/__init__.py -> build/lib.linux-x86_64-3.9/zmq/ssh copying zmq/ssh/tunnel.py -> build/lib.linux-x86_64-3.9/zmq/ssh copying zmq/ssh/forward.py -> build/lib.linux-x86_64-3.9/zmq/ssh copying zmq/__init__.pxd -> build/lib.linux-x86_64-3.9/zmq copying zmq/__init__.pyi -> build/lib.linux-x86_64-3.9/zmq copying zmq/py.typed -> build/lib.linux-x86_64-3.9/zmq copying zmq/utils/buffers.pxd -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/pyversion_compat.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/mutex.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/getpid_compat.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/ipcmaxlen.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/zmq_constants.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/zmq_compat.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/config.json -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/compiler.json -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/sugar/constants.pyi -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/__init__.pyi -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/devices/monitoredqueue.pxd -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/backend/constants.pyi -> build/lib.linux-x86_64-3.9/zmq/backend copying zmq/backend/__init__.pyi -> build/lib.linux-x86_64-3.9/zmq/backend copying zmq/backend/cython/message.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/context.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/socket.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/__init__.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/libzmq.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/checkrc.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/constants.pxi -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/constant_enums.pxi -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cffi/_cdefs.h -> build/lib.linux-x86_64-3.9/zmq/backend/cffi running build_ext running configure {'libraries': ['zmq'], 'include_dirs': ['/usr/local/include'], 'library_dirs': ['/usr/local/lib'], 'runtime_library_dirs': ['/usr/local/lib'], 'extra_link_args': []} Configure: Autodetecting ZMQ settings... Custom ZMQ dir: /usr/local Checking for timer_create ** Errors about missing timer_create are a normal part of this process ** ************************************************ creating build/temp.linux-x86_64-3.9/scratch/tmp gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -c /tmp/timer_createtj68jlkh.c -o build/temp.linux-x86_64-3.9/scratch/tmp/timer_createtj68jlkh.o /tmp/timer_createtj68jlkh.c: In function 'main': /tmp/timer_createtj68jlkh.c:2:5: warning: implicit declaration of function 'timer_create' [-Wimplicit-function-declaration] 2 | timer_create(); | ^~~~~~~~~~~~ gcc build/temp.linux-x86_64-3.9/scratch/tmp/timer_createtj68jlkh.o -o build/temp.linux-x86_64-3.9/scratch/a.out error: [Errno 2] No such file or directory: 'a.out' Warning: Couldn't find an acceptable libzmq on the system. If you expected pyzmq to link against an installed libzmq, please check to make sure: * You have a C compiler installed * A development version of Python is installed (including headers) * A development version of ZMQ >= 3.2 is installed (including headers) * If ZMQ is not in a default location, supply the argument --zmq=<path> * If you did recently install ZMQ to a default location, try rebuilding the ld cache with `sudo ldconfig` or specify zmq's location with `--zmq=/usr/local` You can skip all this detection/waiting nonsense if you know you want pyzmq to bundle libzmq as an extension by passing: `--zmq=bundled` I will now try to build libzmq as a Python extension unless you interrupt me (^C) in the next 10 seconds... ************************************************ 10... 9... 8... 7... 6... 5... 4... 3... 2... 1... Using bundled libzmq already have bundled/zeromq attempting ./configure to generate platform.hpp Warning: failed to configure libzmq: [Errno 2] No such file or directory: './configure' staging platform.hpp from: /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/pyzmq-22.2.1/src/buildutils/include_linux checking for timer_create ************************************************ ************************************************ creating build/temp.linux-x86_64-3.9/tmp gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -c /tmp/timer_createz3u5h8pt.c -o build/temp.linux-x86_64-3.9/tmp/timer_createz3u5h8pt.o /tmp/timer_createz3u5h8pt.c: In function 'main': /tmp/timer_createz3u5h8pt.c:2:5: warning: implicit declaration of function 'timer_create' [-Wimplicit-function-declaration] 2 | timer_create(); | ^~~~~~~~~~~~ gcc build/temp.linux-x86_64-3.9/tmp/timer_createz3u5h8pt.o -o build/temp.linux-x86_64-3.9/a.out error: [Errno 2] No such file or directory: 'a.out' Building wheel for pyzmq (PEP 517): finished with status 'error' ERROR: Failed building wheel for pyzmq Failed to build pyzmq ERROR: Failed to build one or more wheels ******************************************************************************** Error building a wheel for pyzmq-22.2.1 ******************************************************************************** real 0m18.219s user 0m4.790s sys 0m0.828s ************************************************************************ Error installing package pyzmq-22.2.1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log files /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/logs/pkgs/pyzmq-22.2.1.log and /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/config.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/pyzmq-22.2.1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/pyzmq-22.2.1' && '/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/sage' --buildsh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Using cached file /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/upstream/pyzmq-22.2.1.tar.gz pyzmq-22.2.1 ==================================================== Setting up build directory for pyzmq-22.2.1 Finished extraction No patch files found in ../patches **************************************************** Host system: Linux peart-furu-or-jp 5.14.17-301.fc35.x86_64 #1 SMP Mon Nov 8 13:57:43 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/11/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-redhat-linux Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,objc,obj-c++,ada,go,d,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl=/builddir/build/BUILD/gcc-11.2.1-20210728/obj-x86_64-redhat-linux/isl-install --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux --with-build-config=bootstrap-lto --enable-link-serialization=1 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.1 20210728 (Red Hat 11.2.1-1) (GCC) **************************************************** Package 'pyzmq' is currently not installed No legacy uninstaller found for 'pyzmq'; nothing to do Installing pyzmq-22.2.1 Processing /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/pyzmq-22.2.1/src Preparing wheel metadata: started Running command /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/bin/python3 /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmp29v1g7tl running dist_info creating /tmp/pip-modern-metadata-1vmmi3z4/pyzmq.egg-info writing /tmp/pip-modern-metadata-1vmmi3z4/pyzmq.egg-info/PKG-INFO writing dependency_links to /tmp/pip-modern-metadata-1vmmi3z4/pyzmq.egg-info/dependency_links.txt writing requirements to /tmp/pip-modern-metadata-1vmmi3z4/pyzmq.egg-info/requires.txt writing top-level names to /tmp/pip-modern-metadata-1vmmi3z4/pyzmq.egg-info/top_level.txt writing manifest file '/tmp/pip-modern-metadata-1vmmi3z4/pyzmq.egg-info/SOURCES.txt' running configure Settings obtained from pkg-config: {'library_dirs': [], 'include_dirs': [], 'libraries': ['zmq']} {'libraries': ['zmq'], 'include_dirs': [], 'library_dirs': [], 'runtime_library_dirs': [], 'extra_link_args': []} gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -c build/temp.linux-x86_64-3.9/scratch/check_sys_un.c -o build/temp.linux-x86_64-3.9/scratch/check_sys_un.o gcc build/temp.linux-x86_64-3.9/scratch/check_sys_un.o -o build/temp.linux-x86_64-3.9/scratch/check_sys_un Configure: Autodetecting ZMQ settings... Custom ZMQ dir: Checking for timer_create ** Errors about missing timer_create are a normal part of this process ** ************************************************ creating build/temp.linux-x86_64-3.9/scratch/tmp gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -c /tmp/timer_createleng_bw1.c -o build/temp.linux-x86_64-3.9/scratch/tmp/timer_createleng_bw1.o /tmp/timer_createleng_bw1.c: In function 'main': /tmp/timer_createleng_bw1.c:2:5: warning: implicit declaration of function 'timer_create' [-Wimplicit-function-declaration] 2 | timer_create(); | ^~~~~~~~~~~~ gcc build/temp.linux-x86_64-3.9/scratch/tmp/timer_createleng_bw1.o -o build/temp.linux-x86_64-3.9/scratch/a.out error: [Errno 2] No such file or directory: 'a.out' Failed with default libzmq, trying again with /usr/local {'libraries': ['zmq'], 'include_dirs': ['/usr/local/include'], 'library_dirs': ['/usr/local/lib'], 'runtime_library_dirs': ['/usr/local/lib'], 'extra_link_args': []} Configure: Autodetecting ZMQ settings... Custom ZMQ dir: /usr/local Checking for timer_create ** Errors about missing timer_create are a normal part of this process ** ************************************************ gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -c /tmp/timer_createv2vapi10.c -o build/temp.linux-x86_64-3.9/scratch/tmp/timer_createv2vapi10.o /tmp/timer_createv2vapi10.c: In function 'main': /tmp/timer_createv2vapi10.c:2:5: warning: implicit declaration of function 'timer_create' [-Wimplicit-function-declaration] 2 | timer_create(); | ^~~~~~~~~~~~ Assembler messages: Fatal error: can't create build/temp.linux-x86_64-3.9/scratch/tmp/timer_createv2vapi10.o: No such file or directory ** The above error about timer_create is normal and not a problem! ** no timer_create, linking librt gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -I/usr/local/include -Izmq/utils -c build/temp.linux-x86_64-3.9/scratch/vers.c -o build/temp.linux-x86_64-3.9/scratch/vers.o gcc build/temp.linux-x86_64-3.9/scratch/vers.o -L/usr/local/lib -Wl,--enable-new-dtags,-R/usr/local/lib -lzmq -lrt -o build/temp.linux-x86_64-3.9/scratch/vers ZMQ version detected: 4.3.4 ************************************************ reading manifest file '/tmp/pip-modern-metadata-1vmmi3z4/pyzmq.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'setupegg.py' warning: no files found matching 'tox.ini' warning: no files found matching '.travis.yml' no previously-included directories found matching 'docs/build' no previously-included directories found matching 'docs/gh-pages' warning: no directories found matching 'bundled/zeromq/tweetnacl' warning: no previously-included files found matching 'bundled/zeromq/src/Makefile*' warning: no previously-included files found matching 'bundled/zeromq/src/platform.hpp' warning: no previously-included files found matching 'zmq/libzmq*' warning: no previously-included files matching '.deps/*' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files matching '.mailmap' found anywhere in distribution warning: no previously-included files matching 'Makefile.am' found anywhere in distribution warning: no previously-included files matching 'Makefile.in' found anywhere in distribution adding license file 'COPYING.BSD' adding license file 'COPYING.LESSER' adding license file 'AUTHORS.md' writing manifest file '/tmp/pip-modern-metadata-1vmmi3z4/pyzmq.egg-info/SOURCES.txt' creating '/tmp/pip-modern-metadata-1vmmi3z4/pyzmq.dist-info' adding license file "COPYING.BSD" (matched pattern "COPYING*") adding license file "COPYING.LESSER" (matched pattern "COPYING*") adding license file "AUTHORS.md" (matched pattern "AUTHORS*") Preparing wheel metadata: finished with status 'done' Building wheels for collected packages: pyzmq Building wheel for pyzmq (PEP 517): started Running command /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/bin/python3 /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmpg1q_fbfb running bdist_wheel running build running build_py creating build/lib.linux-x86_64-3.9 creating build/lib.linux-x86_64-3.9/zmq copying zmq/_future.py -> build/lib.linux-x86_64-3.9/zmq copying zmq/decorators.py -> build/lib.linux-x86_64-3.9/zmq copying zmq/__init__.py -> build/lib.linux-x86_64-3.9/zmq copying zmq/error.py -> build/lib.linux-x86_64-3.9/zmq copying zmq/asyncio.py -> build/lib.linux-x86_64-3.9/zmq creating build/lib.linux-x86_64-3.9/zmq/green copying zmq/green/core.py -> build/lib.linux-x86_64-3.9/zmq/green copying zmq/green/__init__.py -> build/lib.linux-x86_64-3.9/zmq/green copying zmq/green/device.py -> build/lib.linux-x86_64-3.9/zmq/green copying zmq/green/poll.py -> build/lib.linux-x86_64-3.9/zmq/green creating build/lib.linux-x86_64-3.9/zmq/green/eventloop copying zmq/green/eventloop/zmqstream.py -> build/lib.linux-x86_64-3.9/zmq/green/eventloop copying zmq/green/eventloop/__init__.py -> build/lib.linux-x86_64-3.9/zmq/green/eventloop copying zmq/green/eventloop/ioloop.py -> build/lib.linux-x86_64-3.9/zmq/green/eventloop creating build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/win32.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/strtypes.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/__init__.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/jsonapi.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/constant_names.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/z85.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/monitor.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/garbage.py -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/interop.py -> build/lib.linux-x86_64-3.9/zmq/utils creating build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/context.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/socket.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/stopwatch.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/version.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/__init__.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/attrsettr.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/constants.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/frame.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/tracker.py -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/poll.py -> build/lib.linux-x86_64-3.9/zmq/sugar creating build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/basedevice.py -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/proxydevice.py -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/__init__.py -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/monitoredqueue.py -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/monitoredqueuedevice.py -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/devices/proxysteerabledevice.py -> build/lib.linux-x86_64-3.9/zmq/devices creating build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_log.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_ioloop.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_z85.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_zmqstream.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_pubsub.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_multipart.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_win32_shim.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_context.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_draft.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_poll.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_future.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_cython.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_imports.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_retry_eintr.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_monqueue.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_cffi_backend.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/__init__.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_etc.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_reqrep.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_asyncio.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_constants.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_version.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_proxy_steerable.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_message.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_device.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_error.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_monitor.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_ssh.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_includes.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_auth.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/conftest.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_socket.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_decorators.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_mypy.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_pair.py -> build/lib.linux-x86_64-3.9/zmq/tests copying zmq/tests/test_security.py -> build/lib.linux-x86_64-3.9/zmq/tests creating build/lib.linux-x86_64-3.9/zmq/log copying zmq/log/__main__.py -> build/lib.linux-x86_64-3.9/zmq/log copying zmq/log/handlers.py -> build/lib.linux-x86_64-3.9/zmq/log copying zmq/log/__init__.py -> build/lib.linux-x86_64-3.9/zmq/log creating build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/certs.py -> build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/thread.py -> build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/__init__.py -> build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/ioloop.py -> build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/base.py -> build/lib.linux-x86_64-3.9/zmq/auth copying zmq/auth/asyncio.py -> build/lib.linux-x86_64-3.9/zmq/auth creating build/lib.linux-x86_64-3.9/zmq/backend copying zmq/backend/select.py -> build/lib.linux-x86_64-3.9/zmq/backend copying zmq/backend/__init__.py -> build/lib.linux-x86_64-3.9/zmq/backend creating build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/__init__.py -> build/lib.linux-x86_64-3.9/zmq/backend/cython creating build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/context.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/socket.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/devices.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/message.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/_poll.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/__init__.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/error.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/constants.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi copying zmq/backend/cffi/utils.py -> build/lib.linux-x86_64-3.9/zmq/backend/cffi creating build/lib.linux-x86_64-3.9/zmq/eventloop copying zmq/eventloop/future.py -> build/lib.linux-x86_64-3.9/zmq/eventloop copying zmq/eventloop/zmqstream.py -> build/lib.linux-x86_64-3.9/zmq/eventloop copying zmq/eventloop/_deprecated.py -> build/lib.linux-x86_64-3.9/zmq/eventloop copying zmq/eventloop/__init__.py -> build/lib.linux-x86_64-3.9/zmq/eventloop copying zmq/eventloop/ioloop.py -> build/lib.linux-x86_64-3.9/zmq/eventloop creating build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/log.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/util.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/__init__.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/ioloop.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/stack_context.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado copying zmq/eventloop/minitornado/concurrent.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado creating build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/posix.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/auto.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/__init__.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/windows.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/common.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform copying zmq/eventloop/minitornado/platform/interface.py -> build/lib.linux-x86_64-3.9/zmq/eventloop/minitornado/platform creating build/lib.linux-x86_64-3.9/zmq/ssh copying zmq/ssh/__init__.py -> build/lib.linux-x86_64-3.9/zmq/ssh copying zmq/ssh/tunnel.py -> build/lib.linux-x86_64-3.9/zmq/ssh copying zmq/ssh/forward.py -> build/lib.linux-x86_64-3.9/zmq/ssh copying zmq/__init__.pxd -> build/lib.linux-x86_64-3.9/zmq copying zmq/__init__.pyi -> build/lib.linux-x86_64-3.9/zmq copying zmq/py.typed -> build/lib.linux-x86_64-3.9/zmq copying zmq/utils/buffers.pxd -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/pyversion_compat.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/mutex.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/getpid_compat.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/ipcmaxlen.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/zmq_constants.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/zmq_compat.h -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/config.json -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/utils/compiler.json -> build/lib.linux-x86_64-3.9/zmq/utils copying zmq/sugar/constants.pyi -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/sugar/__init__.pyi -> build/lib.linux-x86_64-3.9/zmq/sugar copying zmq/devices/monitoredqueue.pxd -> build/lib.linux-x86_64-3.9/zmq/devices copying zmq/backend/constants.pyi -> build/lib.linux-x86_64-3.9/zmq/backend copying zmq/backend/__init__.pyi -> build/lib.linux-x86_64-3.9/zmq/backend copying zmq/backend/cython/message.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/context.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/socket.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/__init__.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/libzmq.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/checkrc.pxd -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/constants.pxi -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cython/constant_enums.pxi -> build/lib.linux-x86_64-3.9/zmq/backend/cython copying zmq/backend/cffi/_cdefs.h -> build/lib.linux-x86_64-3.9/zmq/backend/cffi running build_ext running configure {'libraries': ['zmq'], 'include_dirs': ['/usr/local/include'], 'library_dirs': ['/usr/local/lib'], 'runtime_library_dirs': ['/usr/local/lib'], 'extra_link_args': []} Configure: Autodetecting ZMQ settings... Custom ZMQ dir: /usr/local Checking for timer_create ** Errors about missing timer_create are a normal part of this process ** ************************************************ creating build/temp.linux-x86_64-3.9/scratch/tmp gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -c /tmp/timer_creatersnenhx3.c -o build/temp.linux-x86_64-3.9/scratch/tmp/timer_creatersnenhx3.o /tmp/timer_creatersnenhx3.c: In function 'main': /tmp/timer_creatersnenhx3.c:2:5: warning: implicit declaration of function 'timer_create' [-Wimplicit-function-declaration] 2 | timer_create(); | ^~~~~~~~~~~~ gcc build/temp.linux-x86_64-3.9/scratch/tmp/timer_creatersnenhx3.o -o build/temp.linux-x86_64-3.9/scratch/a.out error: [Errno 2] No such file or directory: 'a.out' Warning: Couldn't find an acceptable libzmq on the system. If you expected pyzmq to link against an installed libzmq, please check to make sure: * You have a C compiler installed * A development version of Python is installed (including headers) * A development version of ZMQ >= 3.2 is installed (including headers) * If ZMQ is not in a default location, supply the argument --zmq=<path> * If you did recently install ZMQ to a default location, try rebuilding the ld cache with `sudo ldconfig` or specify zmq's location with `--zmq=/usr/local` You can skip all this detection/waiting nonsense if you know you want pyzmq to bundle libzmq as an extension by passing: `--zmq=bundled` I will now try to build libzmq as a Python extension unless you interrupt me (^C) in the next 10 seconds... ************************************************ 10... 9... 8... 7... 6... 5... 4... 3... 2... 1... Using bundled libzmq already have bundled/zeromq attempting ./configure to generate platform.hpp Warning: failed to configure libzmq: [Errno 2] No such file or directory: './configure' staging platform.hpp from: /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/pyzmq-22.2.1/src/buildutils/include_linux checking for timer_create ************************************************ ************************************************ creating build/temp.linux-x86_64-3.9/tmp gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -fPIC -c /tmp/timer_create2lqiz7w8.c -o build/temp.linux-x86_64-3.9/tmp/timer_create2lqiz7w8.o /tmp/timer_create2lqiz7w8.c: In function 'main': /tmp/timer_create2lqiz7w8.c:2:5: warning: implicit declaration of function 'timer_create' [-Wimplicit-function-declaration] 2 | timer_create(); | ^~~~~~~~~~~~ gcc build/temp.linux-x86_64-3.9/tmp/timer_create2lqiz7w8.o -o build/temp.linux-x86_64-3.9/a.out error: [Errno 2] No such file or directory: 'a.out' Building wheel for pyzmq (PEP 517): finished with status 'error' ERROR: Failed building wheel for pyzmq Failed to build pyzmq ERROR: Failed to build one or more wheels ******************************************************************************** Error building a wheel for pyzmq-22.2.1 ******************************************************************************** real 0m18.465s user 0m4.952s sys 0m0.933s ************************************************************************ Error installing package pyzmq-22.2.1 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log files /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/logs/pkgs/pyzmq-22.2.1.log and /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/config.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/pyzmq-22.2.1 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/pyzmq-22.2.1' && '/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/sage' --buildsh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************
Attempting to download package cysignals-1.10.3.tar.gz from mirrors http://ftp.riken.jp/sagemath/spkg/upstream/cysignals/cysignals-1.10.3.tar.gz [......................................................................] cysignals-1.10.3 ==================================================== Setting up build directory for cysignals-1.10.3 Finished extraction No patch files found in ../patches **************************************************** Host system: Linux peart-furu-or-jp 5.14.17-301.fc35.x86_64 #1 SMP Mon Nov 8 13:57:43 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/11/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-redhat-linux Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,objc,obj-c++,ada,go,d,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl=/builddir/build/BUILD/gcc-11.2.1-20210728/obj-x86_64-redhat-linux/isl-install --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux --with-build-config=bootstrap-lto --enable-link-serialization=1 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.1 20210728 (Red Hat 11.2.1-1) (GCC) **************************************************** Package 'cysignals' is currently not installed No legacy uninstaller found for 'cysignals'; nothing to do Configuring cysignals-1.10.3 configure: WARNING: unrecognized options: --disable-static, --disable-maintainer-mode, --disable-dependency-tracking checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether we are using the GNU C++ compiler... yes checking whether gcc accepts -g... yes checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking execinfo.h usability... yes checking execinfo.h presence... yes checking for execinfo.h... yes checking sys/mman.h usability... yes checking sys/mman.h presence... yes checking for sys/mman.h... yes checking sys/prctl.h usability... yes checking sys/prctl.h presence... yes checking for sys/prctl.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/wait.h usability... yes checking sys/wait.h presence... yes checking for sys/wait.h... yes checking windows.h usability... no checking windows.h presence... no checking for windows.h... no checking for fork... yes checking for kill... yes checking for sigprocmask... yes checking for sigaltstack... yes checking for backtrace... yes checking for library containing pari_init... -lpari checking whether PARI_SIGINT_block is declared... yes checking for emms instruction... yes checking whether setjmp() saves the signal mask... no checking for GNU libc... yes checking for _Atomic in C code... yes checking for _Atomic with OpenMP in C code... yes checking for _Atomic in C++ code... no checking for std::atomic... yes checking for std::atomic with OpenMP in C++ code... yes configure: creating ./config.status config.status: creating src/cysignals/signals.pxd config.status: creating src/config.h config.status: creating src/cysignals/cysignals_config.h configure: WARNING: unrecognized options: --disable-static, --disable-maintainer-mode, --disable-dependency-tracking Installing cysignals-1.10.3 Processing /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3/src Running command python setup.py egg_info running egg_info creating /tmp/pip-pip-egg-info-y9d2popa/cysignals.egg-info writing /tmp/pip-pip-egg-info-y9d2popa/cysignals.egg-info/PKG-INFO writing dependency_links to /tmp/pip-pip-egg-info-y9d2popa/cysignals.egg-info/dependency_links.txt writing requirements to /tmp/pip-pip-egg-info-y9d2popa/cysignals.egg-info/requires.txt writing top-level names to /tmp/pip-pip-egg-info-y9d2popa/cysignals.egg-info/top_level.txt writing manifest file '/tmp/pip-pip-egg-info-y9d2popa/cysignals.egg-info/SOURCES.txt' reading manifest file '/tmp/pip-pip-egg-info-y9d2popa/cysignals.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'build' no previously-included directories found matching 'dist' no previously-included directories found matching 'tmp' no previously-included directories found matching '.*' no previously-included directories found matching 'example/.*' adding license file 'LICENSE' writing manifest file '/tmp/pip-pip-egg-info-y9d2popa/cysignals.egg-info/SOURCES.txt' Building wheels for collected packages: cysignals Building wheel for cysignals (setup.py): started Running command /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3/src/setup.py'"'"'; __file__='"'"'/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3/src/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-bmmuizcq running bdist_wheel running build Compiling src/cysignals/signals.pyx because it changed. Compiling src/cysignals/pysignals.pyx because it changed. Compiling src/cysignals/alarm.pyx because it changed. Compiling src/cysignals/pselect.pyx because it changed. Compiling src/cysignals/tests.pyx because it changed. [1/5] Cythonizing src/cysignals/alarm.pyx [2/5] Cythonizing src/cysignals/pselect.pyx [3/5] Cythonizing src/cysignals/pysignals.pyx [4/5] Cythonizing src/cysignals/signals.pyx [5/5] Cythonizing src/cysignals/tests.pyx running build_py creating build/lib.linux-x86_64-3.9 creating build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/__init__.py -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/signals.pxi -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/memory.pxi -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/pysignals.pxd -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/signals.pxd -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/memory.pxd -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/struct_signals.h -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/cysignals_config.h -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/pxi_warning.h -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/macros.h -> build/lib.linux-x86_64-3.9/cysignals running build_ext building 'cysignals.signals' extension creating build/temp.linux-x86_64-3.9 creating build/temp.linux-x86_64-3.9/build creating build/temp.linux-x86_64-3.9/build/src creating build/temp.linux-x86_64-3.9/build/src/cysignals gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -Wp,-U_FORTIFY_SOURCE -fPIC -DCYTHON_CLINE_IN_TRACEBACK=0 -U_FORTIFY_SOURCE -Isrc/cysignals -Isrc -I/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/include/python3.9 -c build/src/cysignals/signals.c -o build/temp.linux-x86_64-3.9/build/src/cysignals/signals.o -pthread In file included from build/src/cysignals/signals.c:1585: build/src/cysignals/implementation.c: In function 'setup_trampoline': build/src/cysignals/implementation.c:339:29: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare] 339 | if (trampolinestacksize < PTHREAD_STACK_MIN) | ^ In file included from build/src/cysignals/signals.c:1585: build/src/cysignals/implementation.c: In function 'setup_alt_stack': build/src/cysignals/implementation.c:448:17: error: storage size of 'alt_stack' isn't constant 448 | static char alt_stack[MINSIGSTKSZ + 5120 + BACKTRACELEN * sizeof(void*)]; | ^~~~~~~~~ error: command '/usr/bin/gcc' failed with exit code 1 Building wheel for cysignals (setup.py): finished with status 'error' ERROR: Failed building wheel for cysignals Running setup.py clean for cysignals Running command /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3/src/setup.py'"'"'; __file__='"'"'/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3/src/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all running clean removing 'build/temp.linux-x86_64-3.9' (and everything under it) removing 'build/lib.linux-x86_64-3.9' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it Failed to build cysignals ERROR: Failed to build one or more wheels ******************************************************************************** Error building a wheel for cysignals-1.10.3 ******************************************************************************** real 0m12.549s user 0m8.016s sys 0m1.852s ************************************************************************ Error installing package cysignals-1.10.3 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log files /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/logs/pkgs/cysignals-1.10.3.log and /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/config.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3' && '/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/sage' --buildsh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ Using cached file /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/upstream/cysignals-1.10.3.tar.gz cysignals-1.10.3 ==================================================== Setting up build directory for cysignals-1.10.3 Finished extraction No patch files found in ../patches **************************************************** Host system: Linux peart-furu-or-jp 5.14.17-301.fc35.x86_64 #1 SMP Mon Nov 8 13:57:43 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux **************************************************** C compiler: gcc C compiler version: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/11/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-redhat-linux Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,objc,obj-c++,ada,go,d,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl=/builddir/build/BUILD/gcc-11.2.1-20210728/obj-x86_64-redhat-linux/isl-install --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux --with-build-config=bootstrap-lto --enable-link-serialization=1 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.1 20210728 (Red Hat 11.2.1-1) (GCC) **************************************************** Package 'cysignals' is currently not installed No legacy uninstaller found for 'cysignals'; nothing to do Configuring cysignals-1.10.3 configure: WARNING: unrecognized options: --disable-static, --disable-maintainer-mode, --disable-dependency-tracking checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether we are using the GNU C++ compiler... yes checking whether gcc accepts -g... yes checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking execinfo.h usability... yes checking execinfo.h presence... yes checking for execinfo.h... yes checking sys/mman.h usability... yes checking sys/mman.h presence... yes checking for sys/mman.h... yes checking sys/prctl.h usability... yes checking sys/prctl.h presence... yes checking for sys/prctl.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/wait.h usability... yes checking sys/wait.h presence... yes checking for sys/wait.h... yes checking windows.h usability... no checking windows.h presence... no checking for windows.h... no checking for fork... yes checking for kill... yes checking for sigprocmask... yes checking for sigaltstack... yes checking for backtrace... yes checking for library containing pari_init... -lpari checking whether PARI_SIGINT_block is declared... yes checking for emms instruction... yes checking whether setjmp() saves the signal mask... no checking for GNU libc... yes checking for _Atomic in C code... yes checking for _Atomic with OpenMP in C code... yes checking for _Atomic in C++ code... no checking for std::atomic... yes checking for std::atomic with OpenMP in C++ code... yes configure: creating ./config.status config.status: creating src/cysignals/signals.pxd config.status: creating src/config.h config.status: creating src/cysignals/cysignals_config.h configure: WARNING: unrecognized options: --disable-static, --disable-maintainer-mode, --disable-dependency-tracking Installing cysignals-1.10.3 Processing /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3/src Running command python setup.py egg_info running egg_info creating /tmp/pip-pip-egg-info-cbebpy99/cysignals.egg-info writing /tmp/pip-pip-egg-info-cbebpy99/cysignals.egg-info/PKG-INFO writing dependency_links to /tmp/pip-pip-egg-info-cbebpy99/cysignals.egg-info/dependency_links.txt writing requirements to /tmp/pip-pip-egg-info-cbebpy99/cysignals.egg-info/requires.txt writing top-level names to /tmp/pip-pip-egg-info-cbebpy99/cysignals.egg-info/top_level.txt writing manifest file '/tmp/pip-pip-egg-info-cbebpy99/cysignals.egg-info/SOURCES.txt' reading manifest file '/tmp/pip-pip-egg-info-cbebpy99/cysignals.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' no previously-included directories found matching 'build' no previously-included directories found matching 'dist' no previously-included directories found matching 'tmp' no previously-included directories found matching '.*' no previously-included directories found matching 'example/.*' adding license file 'LICENSE' writing manifest file '/tmp/pip-pip-egg-info-cbebpy99/cysignals.egg-info/SOURCES.txt' Building wheels for collected packages: cysignals Building wheel for cysignals (setup.py): started Running command /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3/src/setup.py'"'"'; __file__='"'"'/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3/src/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-mvfengzs running bdist_wheel running build Compiling src/cysignals/signals.pyx because it changed. Compiling src/cysignals/pysignals.pyx because it changed. Compiling src/cysignals/alarm.pyx because it changed. Compiling src/cysignals/pselect.pyx because it changed. Compiling src/cysignals/tests.pyx because it changed. [1/5] Cythonizing src/cysignals/alarm.pyx [2/5] Cythonizing src/cysignals/pselect.pyx [3/5] Cythonizing src/cysignals/pysignals.pyx [4/5] Cythonizing src/cysignals/signals.pyx [5/5] Cythonizing src/cysignals/tests.pyx running build_py creating build/lib.linux-x86_64-3.9 creating build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/__init__.py -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/signals.pxi -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/memory.pxi -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/pysignals.pxd -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/signals.pxd -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/memory.pxd -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/struct_signals.h -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/cysignals_config.h -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/pxi_warning.h -> build/lib.linux-x86_64-3.9/cysignals copying src/cysignals/macros.h -> build/lib.linux-x86_64-3.9/cysignals running build_ext building 'cysignals.signals' extension creating build/temp.linux-x86_64-3.9 creating build/temp.linux-x86_64-3.9/build creating build/temp.linux-x86_64-3.9/build/src creating build/temp.linux-x86_64-3.9/build/src/cysignals gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -g -O2 -g -O2 -Wp,-U_FORTIFY_SOURCE -fPIC -DCYTHON_CLINE_IN_TRACEBACK=0 -U_FORTIFY_SOURCE -Isrc/cysignals -Isrc -I/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/include/python3.9 -c build/src/cysignals/signals.c -o build/temp.linux-x86_64-3.9/build/src/cysignals/signals.o -pthread In file included from build/src/cysignals/signals.c:1585: build/src/cysignals/implementation.c: In function 'setup_trampoline': build/src/cysignals/implementation.c:339:29: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare] 339 | if (trampolinestacksize < PTHREAD_STACK_MIN) | ^ In file included from build/src/cysignals/signals.c:1585: build/src/cysignals/implementation.c: In function 'setup_alt_stack': build/src/cysignals/implementation.c:448:17: error: storage size of 'alt_stack' isn't constant 448 | static char alt_stack[MINSIGSTKSZ + 5120 + BACKTRACELEN * sizeof(void*)]; | ^~~~~~~~~ error: command '/usr/bin/gcc' failed with exit code 1 Building wheel for cysignals (setup.py): finished with status 'error' ERROR: Failed building wheel for cysignals Running setup.py clean for cysignals Running command /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3/src/setup.py'"'"'; __file__='"'"'/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3/src/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all running clean removing 'build/temp.linux-x86_64-3.9' (and everything under it) removing 'build/lib.linux-x86_64-3.9' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it Failed to build cysignals ERROR: Failed to build one or more wheels ******************************************************************************** Error building a wheel for cysignals-1.10.3 ******************************************************************************** real 0m11.125s user 0m8.266s sys 0m2.626s ************************************************************************ Error installing package cysignals-1.10.3 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log files /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/logs/pkgs/cysignals-1.10.3.log and /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/config.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/local/var/lib/sage/venv-python3.9.7/var/tmp/sage/build/cysignals-1.10.3' && '/home/furutaka/work/sage/sage-9.5.beta7-git-gcc/sage' --buildsh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************
