Attempting to download package libhomfly-1.03.tar.gz from mirrors
https://github.com/sagemath/sage/releases/download/10.8/libhomfly-1.03.tar.gz [xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx] ERROR [transfer|run:135]: [Errno socket error] [Errno 404] Not Found: '//github.com/sagemath/sage/releases/download/10.8/libhomfly-1.03.tar.gz' Exception ignored in: <http.client.HTTPResponse object at 0x1052bea40> Traceback (most recent call last): File "/opt/homebrew/Cellar/python@3.13/3.13.7/Frameworks/Python.framework/Versions/3.13/lib/python3.13/http/client.py", line 432, in close super().close() # set "closed" flag File "/opt/homebrew/Cellar/python@3.13/3.13.7/Frameworks/Python.framework/Versions/3.13/lib/python3.13/http/client.py", line 445, in flush self.fp.flush() ValueError: I/O operation on closed file. https://github.com/sagemath/sage/releases/download/10.7/libhomfly-1.03.tar.gz [xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx] ERROR [transfer|run:135]: [Errno socket error] [Errno 404] Not Found: '//github.com/sagemath/sage/releases/download/10.7/libhomfly-1.03.tar.gz' Exception ignored in: <http.client.HTTPResponse object at 0x1055dc7c0> Traceback (most recent call last): File "/opt/homebrew/Cellar/python@3.13/3.13.7/Frameworks/Python.framework/Versions/3.13/lib/python3.13/http/client.py", line 432, in close super().close() # set "closed" flag File "/opt/homebrew/Cellar/python@3.13/3.13.7/Frameworks/Python.framework/Versions/3.13/lib/python3.13/http/client.py", line 445, in flush self.fp.flush() ValueError: I/O operation on closed file. https://github.com/sagemath/sage/releases/download/10.6/libhomfly-1.03.tar.gz [xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx] ERROR [transfer|run:135]: [Errno socket error] [Errno 404] Not Found: '//github.com/sagemath/sage/releases/download/10.6/libhomfly-1.03.tar.gz' Exception ignored in: <http.client.HTTPResponse object at 0x1053b4c40> Traceback (most recent call last): File "/opt/homebrew/Cellar/python@3.13/3.13.7/Frameworks/Python.framework/Versions/3.13/lib/python3.13/http/client.py", line 432, in close super().close() # set "closed" flag File "/opt/homebrew/Cellar/python@3.13/3.13.7/Frameworks/Python.framework/Versions/3.13/lib/python3.13/http/client.py", line 445, in flush self.fp.flush() ValueError: I/O operation on closed file. http://files.sagemath.org/spkg/upstream/libhomfly/libhomfly-1.03.tar.gz [......................................................................] Setting up build directory /Users/albertyao/sage/local/var/tmp/sage/build/libhomfly-1.03 No patch files found in ../patches Host system: Darwin 2026-Albert-Yao-M4 24.3.0 Darwin Kernel Version 24.3.0: Thu Jan 2 20:31:46 PST 2025; root:xnu-11215.81.4~4/RELEASE_ARM64_T8132 arm64 C compiler: gcc, Apple clang version 17.0.0 (clang-1700.0.13.5), Target: arm64-apple-darwin24.3.0, Thread model: posix, InstalledDir: /Library/Developer/CommandLineTools/usr/bin No stamp file for package 'libhomfly' in /Users/albertyao/sage/local/var/lib/sage/installed No spkg-legacy-uninstall script; nothing to do [spkg-install] Configuring libhomfly-1.03 [spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode [spkg-install] checking for a BSD-compatible install... /usr/bin/install -c [spkg-install] checking whether sleep supports fractional seconds... yes [spkg-install] checking filesystem timestamp resolution... 2 [spkg-install] checking whether build environment is sane... yes [spkg-install] checking for a race-free mkdir -p... mkdir -p [spkg-install] checking for gawk... no [spkg-install] checking for mawk... no [spkg-install] checking for nawk... no [spkg-install] checking for awk... awk [spkg-install] checking whether make sets $(MAKE)... yes [spkg-install] checking whether make supports nested variables... yes [spkg-install] checking xargs -n works... yes [spkg-install] checking whether UID '503' is supported by ustar format... yes [spkg-install] checking whether GID '20' is supported by ustar format... yes [spkg-install] checking how to create a ustar tar archive... gnutar [spkg-install] checking whether make supports the include directive... yes (GNU style) [spkg-install] checking for gcc... gcc [spkg-install] checking whether the C compiler works... yes [spkg-install] checking for C compiler default output file name... a.out [spkg-install] checking for suffix of executables... [spkg-install] checking whether we are cross compiling... no [spkg-install] checking for suffix of object files... o [spkg-install] checking whether the compiler supports GNU C... yes [spkg-install] checking whether gcc accepts -g... yes [spkg-install] checking for gcc option to enable C11 features... none needed [spkg-install] checking whether gcc understands -c and -o together... yes [spkg-install] checking dependency style of gcc... none [spkg-install] checking the archiver (ar) interface... ar [spkg-install] checking for gcc... (cached) gcc [spkg-install] checking whether the compiler supports GNU C... (cached) yes [spkg-install] checking whether gcc accepts -g... (cached) yes [spkg-install] checking for gcc option to enable C11 features... (cached) none needed [spkg-install] checking whether gcc understands -c and -o together... (cached) yes [spkg-install] checking dependency style of gcc... (cached) none [spkg-install] checking build system type... aarch64-apple-darwin24.3.0 [spkg-install] checking host system type... aarch64-apple-darwin24.3.0 [spkg-install] checking how to print strings... printf [spkg-install] checking for a sed that does not truncate output... /usr/bin/sed [spkg-install] checking for grep that handles long lines and -e... /usr/bin/grep [spkg-install] checking for egrep... /usr/bin/grep -E [spkg-install] checking for fgrep... /usr/bin/grep -F [spkg-install] checking for ld used by gcc... /Library/Developer/CommandLineTools/usr/bin/ld [spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no [spkg-install] checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B [spkg-install] checking the name lister (/usr/bin/nm -B) interface... BSD nm [spkg-install] checking whether ln -s works... yes [spkg-install] checking the maximum length of command line arguments... 786432 [spkg-install] checking how to convert aarch64-apple-darwin24.3.0 file names to aarch64-apple-darwin24.3.0 format... func_convert_file_noop [spkg-install] checking how to convert aarch64-apple-darwin24.3.0 file names to toolchain format... func_convert_file_noop [spkg-install] checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files... -r [spkg-install] checking for file... file [spkg-install] checking for objdump... objdump [spkg-install] checking how to recognize dependent libraries... pass_all [spkg-install] checking for dlltool... no [spkg-install] checking how to associate runtime and link libraries... printf %s\n [spkg-install] checking for ranlib... ranlib [spkg-install] checking for archiver @FILE support... no [spkg-install] checking for strip... strip [spkg-install] checking command to parse /usr/bin/nm -B output from gcc object... ok [spkg-install] checking for sysroot... no [spkg-install] checking for a working dd... /bin/dd [spkg-install] checking how to truncate binary pipes... /bin/dd bs=4096 count=1 [spkg-install] checking for mt... no [spkg-install] checking if : is a manifest tool... no [spkg-install] checking for dsymutil... dsymutil [spkg-install] checking for nmedit... nmedit [spkg-install] checking for lipo... lipo [spkg-install] checking for otool... otool [spkg-install] checking for otool64... no [spkg-install] checking for -single_module linker flag... ld: warning: -single_module is obsolete [spkg-install] no [spkg-install] checking for -no_fixup_chains linker flag... yes [spkg-install] checking for -exported_symbols_list linker flag... yes [spkg-install] checking for -force_load linker flag... yes [spkg-install] checking for stdio.h... yes [spkg-install] checking for stdlib.h... yes [spkg-install] checking for string.h... yes [spkg-install] checking for inttypes.h... yes [spkg-install] checking for stdint.h... yes [spkg-install] checking for strings.h... yes [spkg-install] checking for sys/stat.h... yes [spkg-install] checking for sys/types.h... yes [spkg-install] checking for unistd.h... yes [spkg-install] checking for dlfcn.h... yes [spkg-install] checking for objdir... .libs [spkg-install] checking if gcc supports -fno-rtti -fno-exceptions... yes [spkg-install] checking for gcc option to produce PIC... -fno-common -DPIC [spkg-install] checking if gcc PIC flag -fno-common -DPIC works... yes [spkg-install] checking if gcc static flag -static works... no [spkg-install] checking if gcc supports -c -o file.o... yes [spkg-install] checking if gcc supports -c -o file.o... (cached) yes [spkg-install] checking whether the gcc linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes [spkg-install] checking dynamic linker characteristics... darwin24.3.0 dyld [spkg-install] checking how to hardcode library paths into programs... immediate [spkg-install] checking whether stripping libraries is possible... yes [spkg-install] checking if libtool supports shared libraries... yes [spkg-install] checking whether to build shared libraries... yes [spkg-install] checking whether to build static libraries... no [spkg-install] checking that generated files are newer than configure... done [spkg-install] configure: creating ./config.status [spkg-install] config.status: creating Makefile [spkg-install] config.status: creating lib/Makefile [spkg-install] config.status: creating test/Makefile [spkg-install] config.status: creating libhomfly.pc [spkg-install] config.status: executing depfiles commands [spkg-install] config.status: executing libtool commands [spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode [spkg-install] Building libhomfly-1.03 [spkg-install] Making all in lib [spkg-install] /bin/bash ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"libhomfly\" -DPACKAGE_TARNAME=\"libhomfly\" -DPACKAGE_VERSION=\"1.03\" -DPACKAGE_STRING=\"libhomfly\ 1.03\" -DPACKAGE_BUGREPORT=\"mma...@unizar.es\" -DPACKAGE_URL=\"\" -DPACKAGE=\"libhomfly\" -DVERSION=\"1.03\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -g -O2 -c -o bound.lo bound.c [spkg-install] libtool: compile: gcc -DPACKAGE_NAME=\"libhomfly\" -DPACKAGE_TARNAME=\"libhomfly\" -DPACKAGE_VERSION=\"1.03\" "-DPACKAGE_STRING=\"libhomfly 1.03\"" -DPACKAGE_BUGREPORT=\"mma...@unizar.es\" -DPACKAGE_URL=\"\" -DPACKAGE=\"libhomfly\" -DVERSION=\"1.03\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -g -O2 -c bound.c -fno-common -DPIC -o .libs/bound.o [spkg-install] bound.c:10:10: fatal error: 'gc.h' file not found [spkg-install] 10 | #include <gc.h> [spkg-install] | ^~~~~~ [spkg-install] 1 error generated. [spkg-install] make[6]: *** [bound.lo] Error 1 [spkg-install] make[5]: *** [all-recursive] Error 1 [spkg-install] ******************************************************************************** [spkg-install] Error building libhomfly-1.03 [spkg-install] ******************************************************************************** ************************************************************************ Error installing package libhomfly-1.03 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the log files /Users/albertyao/sage/logs/pkgs/libhomfly-1.03.log and /Users/albertyao/sage/config.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /Users/albertyao/sage/local/var/tmp/sage/build/libhomfly-1.03 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/Users/albertyao/sage/local/var/tmp/sage/build/libhomfly-1.03' && '/Users/albertyao/sage/sage' --buildsh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ On Tuesday, September 9, 2025 at 1:37:17 PM UTC-4 dim...@gmail.com wrote: > please post /Users/albertyao/sage/logs/pkgs/libhomfly-1.03.log here > (you might have noticed that this is asked for in the error message) > > > On Tue, Sep 9, 2025 at 12:25 PM Albert Yao <albert...@gmail.com> wrote: > > > > Hi all, > > > > Here is the error that I'm getting whenever I try running make in the > terminal: > > > > > > Error building Sage. > > > > The following package(s) may have failed to build (not necessarily > > > > during this run of 'make all-start'): > > > > * package: libhomfly-1.03 > > > > last build time: Sep 9 12:08 > > > > log file: /Users/albertyao/sage/logs/pkgs/libhomfly-1.03.log > > > > build directory: > /Users/albertyao/sage/local/var/tmp/sage/build/libhomfly-1.03 > > > > > > How should I fix this? Is there something I haven't downloaded that I > should? > > > > > > Many thanks, > > > > Albert > > On Friday, September 5, 2025 at 2:25:07 AM UTC-4 dim...@gmail.com wrote: > >> > >> > >> > >> On September 4, 2025 10:14:51 PM CDT, Albert Yao <albert...@gmail.com> > wrote: > >> >Hello everyone, > >> > > >> >I’m trying to build SageMath from the GitHub source on MacOs Sequoia > 15.3. > >> >The build runs fine until the *libhomfly-1.03* package, and then fails. > >> > > >> >Has anyone seen this error on macOS? What’s the recommended way to fix > or > >> >bypass this so I can build Sage completely? > >> > >> It's hard to say what goes wrong for you without seeing the error > message you are getting. > >> > >> Please post more info. > >> > >> > >> > > >> > > >> >- Albert > >> > > > > > -- > > You received this message because you are subscribed to the Google > Groups "sage-devel" group. > > To unsubscribe from this group and stop receiving emails from it, send > an email to sage-devel+...@googlegroups.com. > > To view this discussion visit > https://groups.google.com/d/msgid/sage-devel/2fb5e7d2-38cc-4990-9120-5d5c75428118n%40googlegroups.com > . > -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-devel+unsubscr...@googlegroups.com. To view this discussion visit https://groups.google.com/d/msgid/sage-devel/6991bcb5-e528-4f8f-8002-362691159587n%40googlegroups.com.
