On Sat, Nov 14, 2009 at 10:35:28AM -0800, William Stein wrote:
> Mike Hansen and I have finished sage-4.2.1:
>
> http://sage.math.washington.edu/home/wstein/farm/src/sage-4.2.1.tar
>
> Release notes, binaries, the above being posted online, etc., will
> follow in due course.
Thanks!
sage -clone is hanging during the call to Sphinx on my ubuntu 9.4 box,
whereas it worked fine with 4.2.1 alpha0. Anyone else encountering this?
The attached log was generated with:
zephyr-/opt/sage-4.2.1> ./sage -clone truc 2>&1 | tee blog
Of course, this impacts sage -combinat install.
Cheers,
Nicolas
--
Nicolas M. Thiéry "Isil" <[email protected]>
http://Nicolas.Thiery.name/
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-~----------~----~----~----~------~----~------~--~---
updating working directory
1968 files updated, 0 files merged, 0 files removed, 0 files unresolved
----------------------------------------------------------
sage: Building and installing modified Sage library files.
Installing c_lib
gcc -o src/convert.os -c -fPIC -I/opt/sage-4.2.1/local/include
-I/opt/sage-4.2.1/local/include/python2.6 -I/opt/sage-4.2.1/local/include/NTL
-Iinclude src/convert.c
gcc -o src/interrupt.os -c -fPIC -I/opt/sage-4.2.1/local/include
-I/opt/sage-4.2.1/local/include/python2.6 -I/opt/sage-4.2.1/local/include/NTL
-Iinclude src/interrupt.c
src/interrupt.c: In function ‘msg’:
src/interrupt.c:140: attention : le format n'est pas une chaîne littérale et
pas d'argument de format
gcc -o src/mpn_pylong.os -c -fPIC -I/opt/sage-4.2.1/local/include
-I/opt/sage-4.2.1/local/include/python2.6 -I/opt/sage-4.2.1/local/include/NTL
-Iinclude src/mpn_pylong.c
gcc -o src/mpz_pylong.os -c -fPIC -I/opt/sage-4.2.1/local/include
-I/opt/sage-4.2.1/local/include/python2.6 -I/opt/sage-4.2.1/local/include/NTL
-Iinclude src/mpz_pylong.c
gcc -o src/mpz_longlong.os -c -fPIC -I/opt/sage-4.2.1/local/include
-I/opt/sage-4.2.1/local/include/python2.6 -I/opt/sage-4.2.1/local/include/NTL
-Iinclude src/mpz_longlong.c
gcc -o src/stdsage.os -c -fPIC -I/opt/sage-4.2.1/local/include
-I/opt/sage-4.2.1/local/include/python2.6 -I/opt/sage-4.2.1/local/include/NTL
-Iinclude src/stdsage.c
gcc -o src/gmp_globals.os -c -fPIC -I/opt/sage-4.2.1/local/include
-I/opt/sage-4.2.1/local/include/python2.6 -I/opt/sage-4.2.1/local/include/NTL
-Iinclude src/gmp_globals.c
g++ -o src/ZZ_pylong.os -c -fPIC -I/opt/sage-4.2.1/local/include
-I/opt/sage-4.2.1/local/include/python2.6 -I/opt/sage-4.2.1/local/include/NTL
-Iinclude src/ZZ_pylong.cpp
g++ -o src/ntl_wrap.os -c -fPIC -I/opt/sage-4.2.1/local/include
-I/opt/sage-4.2.1/local/include/python2.6 -I/opt/sage-4.2.1/local/include/NTL
-Iinclude src/ntl_wrap.cpp
g++ -o libcsage.so -shared src/convert.os src/interrupt.os src/mpn_pylong.os
src/mpz_pylong.os src/mpz_longlong.os src/stdsage.os src/gmp_globals.os
src/ZZ_pylong.os src/ntl_wrap.os -L/opt/sage-4.2.1/local/lib -lntl -lgmp -lpari
warning:
/opt/sage-4.2.1/devel/sage-truc/sage/plot/plot3d/parametric_surface.pyx:207:20:
cdef variable 'u' declared after it is used
warning:
/opt/sage-4.2.1/devel/sage-truc/sage/plot/plot3d/parametric_surface.pyx:207:23:
cdef variable 'v' declared after it is used
Building interpreters for fast_callable
Updating Cython code....
Building sage/plot/plot3d/parametric_surface.pyx because it depends on
sage/ext/interpreters/wrapper_rdf.pxd.
Building modified file sage/ext/interpreters/wrapper_rdf.pyx.
Building modified file sage/ext/interpreters/wrapper_cdf.pyx.
Building modified file sage/ext/interpreters/wrapper_rr.pyx.
Building modified file sage/ext/interpreters/wrapper_py.pyx.
Building modified file sage/ext/interpreters/wrapper_el.pyx.
python `which cython` --embed-positions --incref-local-binop
-I/opt/sage-4.2.1/devel/sage-truc -o sage/ext/interpreters/wrapper_rdf.c
sage/ext/interpreters/wrapper_rdf.pyx
sage/ext/interpreters/wrapper_rdf.pyx -->
/opt/sage-4.2.1/local//lib/python/site-packages//sage/ext/interpreters/wrapper_rdf.pyx
python `which cython` --embed-positions --incref-local-binop
-I/opt/sage-4.2.1/devel/sage-truc -o sage/ext/interpreters/wrapper_cdf.c
sage/ext/interpreters/wrapper_cdf.pyx
sage/ext/interpreters/wrapper_cdf.pyx -->
/opt/sage-4.2.1/local//lib/python/site-packages//sage/ext/interpreters/wrapper_cdf.pyx
python `which cython` --embed-positions --incref-local-binop
-I/opt/sage-4.2.1/devel/sage-truc -o sage/ext/interpreters/wrapper_rr.c
sage/ext/interpreters/wrapper_rr.pyx
sage/ext/interpreters/wrapper_rr.pyx -->
/opt/sage-4.2.1/local//lib/python/site-packages//sage/ext/interpreters/wrapper_rr.pyx
python `which cython` --embed-positions --incref-local-binop
-I/opt/sage-4.2.1/devel/sage-truc -o sage/ext/interpreters/wrapper_py.c
sage/ext/interpreters/wrapper_py.pyx
sage/ext/interpreters/wrapper_py.pyx -->
/opt/sage-4.2.1/local//lib/python/site-packages//sage/ext/interpreters/wrapper_py.pyx
python `which cython` --embed-positions --incref-local-binop
-I/opt/sage-4.2.1/devel/sage-truc -o sage/ext/interpreters/wrapper_el.c
sage/ext/interpreters/wrapper_el.pyx
sage/ext/interpreters/wrapper_el.pyx -->
/opt/sage-4.2.1/local//lib/python/site-packages//sage/ext/interpreters/wrapper_el.pyx
python `which cython` --embed-positions --incref-local-binop
-I/opt/sage-4.2.1/devel/sage-truc -o sage/plot/plot3d/parametric_surface.c
sage/plot/plot3d/parametric_surface.pyx
sage/plot/plot3d/parametric_surface.pyx -->
/opt/sage-4.2.1/local//lib/python/site-packages//sage/plot/plot3d/parametric_surface.pyx
Time to execute 6 commands: 8.47751903534 seconds
Finished compiling Cython code (time = 8.98427581787 seconds)
running install
running build
running build_py
running build_ext
building 'sage.plot.plot3d.parametric_surface' extension
gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
-fPIC -I/opt/sage-4.2.1/local//include -I/opt/sage-4.2.1/local//include/csage
-I/opt/sage-4.2.1/devel//sage/sage/ext
-I/opt/sage-4.2.1/local/include/python2.6 -c
sage/plot/plot3d/parametric_surface.c -o
build/temp.linux-i686-2.6/sage/plot/plot3d/parametric_surface.o -w
gcc -pthread -shared
build/temp.linux-i686-2.6/sage/plot/plot3d/parametric_surface.o
-L/opt/sage-4.2.1/local//lib -lcsage -lstdc++ -lntl -o
build/lib.linux-i686-2.6/sage/plot/plot3d/parametric_surface.so
building 'sage.ext.interpreters.wrapper_rdf' extension
gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
-fPIC -I/opt/sage-4.2.1/local//include -I/opt/sage-4.2.1/local//include/csage
-I/opt/sage-4.2.1/devel//sage/sage/ext
-I/opt/sage-4.2.1/local/include/python2.6 -c
sage/ext/interpreters/wrapper_rdf.c -o
build/temp.linux-i686-2.6/sage/ext/interpreters/wrapper_rdf.o -w
gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
-fPIC -I/opt/sage-4.2.1/local//include -I/opt/sage-4.2.1/local//include/csage
-I/opt/sage-4.2.1/devel//sage/sage/ext
-I/opt/sage-4.2.1/local/include/python2.6 -c sage/ext/interpreters/interp_rdf.c
-o build/temp.linux-i686-2.6/sage/ext/interpreters/interp_rdf.o -w
gcc -pthread -shared
build/temp.linux-i686-2.6/sage/ext/interpreters/wrapper_rdf.o
build/temp.linux-i686-2.6/sage/ext/interpreters/interp_rdf.o
-L/opt/sage-4.2.1/local//lib -lcsage -lgsl -lstdc++ -lntl -o
build/lib.linux-i686-2.6/sage/ext/interpreters/wrapper_rdf.so
building 'sage.ext.interpreters.wrapper_cdf' extension
gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
-fPIC -I/opt/sage-4.2.1/local//include -I/opt/sage-4.2.1/local//include/csage
-I/opt/sage-4.2.1/devel//sage/sage/ext
-I/opt/sage-4.2.1/local/include/python2.6 -c
sage/ext/interpreters/wrapper_cdf.c -o
build/temp.linux-i686-2.6/sage/ext/interpreters/wrapper_cdf.o -w
gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
-fPIC -I/opt/sage-4.2.1/local//include -I/opt/sage-4.2.1/local//include/csage
-I/opt/sage-4.2.1/devel//sage/sage/ext
-I/opt/sage-4.2.1/local/include/python2.6 -c sage/ext/interpreters/interp_cdf.c
-o build/temp.linux-i686-2.6/sage/ext/interpreters/interp_cdf.o -w
gcc -pthread -shared
build/temp.linux-i686-2.6/sage/ext/interpreters/wrapper_cdf.o
build/temp.linux-i686-2.6/sage/ext/interpreters/interp_cdf.o
-L/opt/sage-4.2.1/local//lib -lcsage -lstdc++ -lntl -o
build/lib.linux-i686-2.6/sage/ext/interpreters/wrapper_cdf.so
building 'sage.ext.interpreters.wrapper_rr' extension
gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
-fPIC -I/opt/sage-4.2.1/local//include -I/opt/sage-4.2.1/local//include/csage
-I/opt/sage-4.2.1/devel//sage/sage/ext
-I/opt/sage-4.2.1/local/include/python2.6 -c sage/ext/interpreters/wrapper_rr.c
-o build/temp.linux-i686-2.6/sage/ext/interpreters/wrapper_rr.o -w
gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
-fPIC -I/opt/sage-4.2.1/local//include -I/opt/sage-4.2.1/local//include/csage
-I/opt/sage-4.2.1/devel//sage/sage/ext
-I/opt/sage-4.2.1/local/include/python2.6 -c sage/ext/interpreters/interp_rr.c
-o build/temp.linux-i686-2.6/sage/ext/interpreters/interp_rr.o -w
gcc -pthread -shared
build/temp.linux-i686-2.6/sage/ext/interpreters/wrapper_rr.o
build/temp.linux-i686-2.6/sage/ext/interpreters/interp_rr.o
-L/opt/sage-4.2.1/local//lib -lcsage -lmpfr -lstdc++ -lntl -o
build/lib.linux-i686-2.6/sage/ext/interpreters/wrapper_rr.so
building 'sage.ext.interpreters.wrapper_py' extension
gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
-fPIC -I/opt/sage-4.2.1/local//include -I/opt/sage-4.2.1/local//include/csage
-I/opt/sage-4.2.1/devel//sage/sage/ext
-I/opt/sage-4.2.1/local/include/python2.6 -c sage/ext/interpreters/wrapper_py.c
-o build/temp.linux-i686-2.6/sage/ext/interpreters/wrapper_py.o -w
gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
-fPIC -I/opt/sage-4.2.1/local//include -I/opt/sage-4.2.1/local//include/csage
-I/opt/sage-4.2.1/devel//sage/sage/ext
-I/opt/sage-4.2.1/local/include/python2.6 -c sage/ext/interpreters/interp_py.c
-o build/temp.linux-i686-2.6/sage/ext/interpreters/interp_py.o -w
gcc -pthread -shared
build/temp.linux-i686-2.6/sage/ext/interpreters/wrapper_py.o
build/temp.linux-i686-2.6/sage/ext/interpreters/interp_py.o
-L/opt/sage-4.2.1/local//lib -lcsage -lstdc++ -lntl -o
build/lib.linux-i686-2.6/sage/ext/interpreters/wrapper_py.so
building 'sage.ext.interpreters.wrapper_el' extension
gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
-fPIC -I/opt/sage-4.2.1/local//include -I/opt/sage-4.2.1/local//include/csage
-I/opt/sage-4.2.1/devel//sage/sage/ext
-I/opt/sage-4.2.1/local/include/python2.6 -c sage/ext/interpreters/wrapper_el.c
-o build/temp.linux-i686-2.6/sage/ext/interpreters/wrapper_el.o -w
gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes
-fPIC -I/opt/sage-4.2.1/local//include -I/opt/sage-4.2.1/local//include/csage
-I/opt/sage-4.2.1/devel//sage/sage/ext
-I/opt/sage-4.2.1/local/include/python2.6 -c sage/ext/interpreters/interp_el.c
-o build/temp.linux-i686-2.6/sage/ext/interpreters/interp_el.o -w
gcc -pthread -shared
build/temp.linux-i686-2.6/sage/ext/interpreters/wrapper_el.o
build/temp.linux-i686-2.6/sage/ext/interpreters/interp_el.o
-L/opt/sage-4.2.1/local//lib -lcsage -lstdc++ -lntl -o
build/lib.linux-i686-2.6/sage/ext/interpreters/wrapper_el.so
Total time spent compiling C/C++ extensions: 18.980905056 seconds.
running install_lib
copying build/lib.linux-i686-2.6/sage/ext/interpreters/wrapper_rr.so ->
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sage/ext/interpreters
copying build/lib.linux-i686-2.6/sage/ext/interpreters/wrapper_py.so ->
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sage/ext/interpreters
copying build/lib.linux-i686-2.6/sage/ext/interpreters/wrapper_cdf.so ->
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sage/ext/interpreters
copying build/lib.linux-i686-2.6/sage/ext/interpreters/wrapper_rdf.so ->
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sage/ext/interpreters
copying build/lib.linux-i686-2.6/sage/ext/interpreters/wrapper_el.so ->
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sage/ext/interpreters
copying build/lib.linux-i686-2.6/sage/plot/plot3d/parametric_surface.so ->
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sage/plot/plot3d
running install_egg_info
Removing
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sage-0.0.0-py2.6.egg-info
Writing
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sage-0.0.0-py2.6.egg-info
real 0m38.393s
user 0m29.546s
sys 0m1.868s
sphinx-build -b html -d
/opt/sage-4.2.1/devel/sage/doc/output/doctrees/en/reference
/opt/sage-4.2.1/devel/sage/doc/en/reference
/opt/sage-4.2.1/devel/sage/doc/output/html/en/reference
/opt/sage-4.2.1/local/lib/python2.6/site-packages/docutils/parsers/rst/__init__.py:178:
DeprecationWarning: BaseException.message has been deprecated as of Python 2.6
self.message = message
/opt/sage-4.2.1/local/lib/python2.6/site-packages/docutils/parsers/rst/states.py:2046:
DeprecationWarning: BaseException.message has been deprecated as of Python 2.6
directive_error.message)
/opt/sage-4.2.1/devel/sage/doc/en/reference/sage/geometry/lattice_polytope.rst::
(ERROR/3) Content block expected for the "note" directive; none found.
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sage/plot/contour_plot.py:docstring
of sage.plot.contour_plot.region_plot:30: (WARNING/2) Bullet list ends without
a blank line; unexpected unindent.
/opt/sage-4.2.1/devel/sage/doc/en/reference/sage/rings/polynomial/polynomial_element.rst::
(ERROR/3) Content block expected for the "warning" directive; none found.
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sage/rings/polynomial/polynomial_ring_constructor.py:docstring
of sage.rings.polynomial.polynomial_ring_constructor.PolynomialRing:200:
(WARNING/2) Definition list ends without a blank line; unexpected unindent.
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sagenb/notebook/config.py:docstring
of sagenb.notebook.config:26: (WARNING/2) Inline interpreted text or phrase
reference start-string without end-string.
/opt/sage-4.2.1/devel/sage/doc/en/reference/sagenb/notebook/twist.rst:6:
(WARNING/2) autodoc can't import/find class
'sagenb.notebook.twist.UserToplevel.userchild_download_worksheets.zip', it
reported error: "userchild_download_worksheets", please check your spelling and
sys.path
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sagenb/storage/abstract_storage.py:docstring
of sagenb.storage.abstract_storage.Datastore.worksheets:7: (WARNING/2) Literal
block expected; none found.
/opt/sage-4.2.1/local/lib/python2.6/site-packages/sagenb/storage/filesystem_storage.py:docstring
of sagenb.storage.filesystem_storage.FilesystemDatastore.worksheets:7:
(WARNING/2) Literal block expected; none found.
