I was trying to build Sage for the first time and I ran into some errors. The
first few I could fix (mismatched gcc/g++/gfortran versions) but after the
initial errors were fixed the installer seemed to be chugging along just fine.
About 3-4 hours in the process failed, though, on conway_polynomials. I've
appended the log file below; I'm not sure what more to say since this has my
system details.
Found package conway_polynomials-0.4.p0 in
spkg/standard/conway_polynomials-0.4.p0.spkg
conway_polynomials-0.4.p0
====================================================
Extracting package
/home/charles/mth/sage-5.13/spkg/standard/conway_polynomials-0.4.p0.spkg
-rw-r--r-- 1 charles charles 227128 Mar 15 2013
/home/charles/mth/sage-5.13/spkg/standard/conway_polynomials-0.4.p0.spkg
Finished extraction
****************************************************
Host system:
Linux zed 3.2.0-56-generic #86-Ubuntu SMP Wed Oct 23 09:20:45 UTC 2013 x86_64
x86_64 x86_64 GNU/Linux
****************************************************
C compiler: gcc
C compiler version:
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.8/lto-wrapper
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Ubuntu
4.8.1-2ubuntu1~12.04' --with-bugurl=file:///usr/share/doc/gcc-4.8/README.Bugs
--enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --prefix=/usr
--program-suffix=-4.8 --enable-shared --enable-linker-build-id
--libexecdir=/usr/lib --without-included-gettext --enable-threads=posix
--with-gxx-include-dir=/usr/include/c++/4.8 --libdir=/usr/lib --enable-nls
--with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug
--enable-libstdcxx-time=yes --enable-gnu-unique-object --enable-plugin
--with-system-zlib --disable-browser-plugin --enable-java-awt=gtk
--enable-gtk-cairo --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64/jre
--enable-java-home --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64
--with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.8-amd64
--with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar
--enable-objc-gc --enable-multiarch --disable-werror --with-arch-32=i686
--with-abi=m64 --with-multilib-list=m32,m64 --with-tune=generic
--enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu
--target=x86_64-linux-gnu
Thread model: posix
gcc version 4.8.1 (Ubuntu 4.8.1-2ubuntu1~12.04)
****************************************************
Setting permissions of DOT_SAGE directory so only you can read and write it.
Traceback (most recent call last):
File "./spkg-install", line 4, in <module>
from sage.all import save
File
"/home/charles/mth/sage-5.13/local/lib/python2.7/site-packages/sage/all.py",
line 71, in <module>
from sage.misc.all import * # takes a while
File
"/home/charles/mth/sage-5.13/local/lib/python2.7/site-packages/sage/misc/all.py",
line 95, in <module>
from functional import (additive_order,
File
"/home/charles/mth/sage-5.13/local/lib/python2.7/site-packages/sage/misc/functional.py",
line 36, in <module>
from sage.rings.complex_double import CDF
ImportError: /home/charles/mth/sage-5.13/local/lib/libgsl.so.0: undefined
symbol: cblas_sdsdot
real 0m1.669s
user 0m0.656s
sys 0m0.136s
************************************************************************
Error installing package conway_polynomials-0.4.p0
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the relevant part of the log file
/home/charles/mth/sage-5.13/logs/pkgs/conway_polynomials-0.4.p0.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/home/charles/mth/sage-5.13/spkg/build/conway_polynomials-0.4.p0 and type
'make' or whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd '/home/charles/mth/sage-5.13/spkg/build/conway_polynomials-0.4.p0' &&
'/home/charles/mth/sage-5.13/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************
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