On Mon, Feb 10, 2014 at 7:59 PM, Brad Burkman <[email protected]> wrote: > Kate, > > Are you allowed to build software on your own on JANUS? That seems like > something the admins would rather do themselves. I suspect that there's > something in the operating system that shuts down such attempts without > administrative status. > > Brad
1. She specifically wrote "... on one of the JANUS compile nodes (6.1.1, downloaded yesterday)..." 2. In my experience with TACC (Texas supercomputers -- https://www.tacc.utexas.edu/) they provide several login nodes for building software (which then lives on a shared filesystem), and a job submission system for actually doing production runs. That said, I've been shutdown when doing "make ptest", since that *looks* like doing a computation. Sage's compile process is a lot more compute-looking than for most software. -- William > > > On Sunday, February 9, 2014 10:55:38 PM UTC-6, Kate Stange wrote: >> >> >> >> Hi all, >> >> I just recently received my allocation on the University of Boulder's >> Research Computing cluster, with the supercomputer JANUS: >> >> https://www.rc.colorado.edu/ >> >> And so I logged in and compiled sage from source on one of the JANUS >> compile nodes (6.1.1, downloaded yesterday). >> >> I ran make on one node with 12 threads, but after about 20 minutes it >> failed on git. I'd love to have Sage working on there, so I'm hoping >> someone out there might be able to make a suggestion. I can contact RC help >> about this, but I thought it might help to have a few responses here about >> what to ask them specifically. >> >> Here's the relevant bit of git's log: >> >> make[4]: Entering directory >> `/projects/kast5807/sage-6.1.1/local/var/tmp/sage/build/git-1.8.4.4/src/perl' >> /usr/bin/perl Makefile.PL PREFIX='/projects/kast5807/sage-6.1.1/local' >> INSTALL_BASE='' >> --localedir='/projects/kast5807/sage-6.1.1/local/share/locale' >> Can't locate ExtUtils/MakeMaker.pm in @INC (@INC contains: >> /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl >> /usr/share/perl5/ >> vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at Makefile.PL line 3. >> BEGIN failed--compilation aborted at Makefile.PL line 3. >> make[4]: *** [perl.mak] Error 2 >> make[4]: Leaving directory >> `/projects/kast5807/sage-6.1.1/local/var/tmp/sage/build/git-1.8.4.4/src/perl' >> make[3]: *** [perl/perl.mak] Error 2 >> make[3]: *** Waiting for unfinished jobs.... >> make[3]: Leaving directory >> `/projects/kast5807/sage-6.1.1/local/var/tmp/sage/build/git-1.8.4.4/src' >> Error building git. >> >> Thanks! >> >> Katherine Stange >> Department of Mathematics ~ University of Colorado, Boulder >> ( Campus Box 395, Boulder, Colorado 80309 ~ [email protected] ) >> >> math: http://math.katestange.net/ >> photos: http://pixel.katestange.net/ >> >> > -- > You received this message because you are subscribed to the Google Groups > "sage-devel" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at http://groups.google.com/group/sage-devel. > For more options, visit https://groups.google.com/groups/opt_out. -- William Stein Professor of Mathematics University of Washington http://wstein.org -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/sage-devel. For more options, visit https://groups.google.com/groups/opt_out.
