Not sure if I understand, but "git clone /path/to/A B" would create B as a 
completely independent source tree.

On Monday, May 19, 2014 3:05:35 PM UTC+1, Ralf Stephan wrote:
>
> Maybe this question is clearer:   in an install that is started from
> directory A/sage by cloning into B and 'make', do you expect the python
> SPKG to be installed into A/B and which instance of python should then
> run 'setup.py' when installing numpy?
>

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