sage-devel Sages, I have not tried to build sage before, and am blindly providing the requested submission of make fail info.
'Looked at first like a problem with copying, mode bits, & ACLs, but thats probably not the real cause. Will continue debugging, but please let me know if this is a recognized issue, or it is clear what I am doing wrong (so far just typed "make" tho ;-). Trusting the "fully automatic" install, I have not changed anything since expanding the tarball. It does look like much of sage itself built fine, but just got in trouble building ntl. All the "Operation not supported" complaints are concerning, but maybe nothing. Thanks, Mark modell@bvacchus$ make . . . cp: preserving ACL for `/home/modell/pkg/sage/sage-6.3/local/include/NTL/version.h': Operation not supported cp: preserving permissions for `/home/modell/pkg/sage/sage-6.3/local/include/NTL/xdouble.h': Operation not supported cp: preserving ACL for `/home/modell/pkg/sage/sage-6.3/local/include/NTL/xdouble.h': Operation not supported make[3]: *** [install] Error 1 make[3]: Leaving directory `/home/modell/pkg/sage/sage-6.3/local/var/tmp/sage/build/ntl-6.1.0.p0/src/ntl/src' Error installing NTL. real 14m11.742s user 12m46.224s sys 0m45.275s ************************************************************************ Error installing package ntl-6.1.0.p0 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the relevant part of the log file /home/modell/pkg/sage/sage-6.3/logs/pkgs/ntl-6.1.0.p0.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/modell/pkg/sage/sage-6.3/local/var/tmp/sage/build/ntl-6.1.0.p0 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/modell/pkg/sage/sage-6.3/local/var/tmp/sage/build/ntl-6.1.0.p0' && '/home/modell/pkg/sage/sage-6.3/sage' -- sh) When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ make[2]: *** [/home/modell/pkg/sage/sage-6.3/local/var/lib/sage/installed/ntl-6.1.0.p0] Error 1 make[2]: Leaving directory `/home/modell/pkg/sage/sage-6.3/build' make[1]: *** [all] Error 2 make[1]: Leaving directory `/home/modell/pkg/sage/sage-6.3/build' real 121m44.060s user 81m39.766s sys 24m35.808s *************************************************************** Error building Sage. The following package(s) may have failed to build: package: ntl-6.1.0.p0 log file: /home/modell/pkg/sage/sage-6.3/logs/pkgs/ntl-6.1.0.p0.log build directory: /home/modell/pkg/sage/sage-6.3/local/var/tmp/sage/build/ntl-6.1.0.p0 The build directory may contain configuration files and other potentially helpful information. WARNING: if you now run 'make' again, the build directory will, by default, be deleted. Set the environment variable SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this. make: *** [build] Error 1 /home/modell/pkg/sage/sage-6.3/logs/pkgs/ntl-6.1.0.p0.log Found local metadata for ntl-6.1.0.p0 Found local sources at /home/modell/pkg/sage/sage-6.3/upstream/ntl-6.1.0.tar.bz2 Checksum: d700374059b730d6d586272f8f78836857617790 vs d700374059b730d6d586272f8f78836857617790 ntl-6.1.0.p0 ==================================================== Setting up build directory for ntl-6.1.0.p0 cp: preserving permissions for `ntl-6.1.0.p0/patches/errorcallback.patch': Operation not supported cp: preserving ACL for `ntl-6.1.0.p0/patches/errorcallback.patch': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0/patches/make.patch': Operation not supported cp: preserving ACL for `ntl-6.1.0.p0/patches/make.patch': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0/patches/configure.ac': Operation not supported cp: preserving ACL for `ntl-6.1.0.p0/patches/configure.ac': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0/patches/new_singular.patch': Operation not supported cp: preserving ACL for `ntl-6.1.0.p0/patches/new_singular.patch': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0/patches/libtool_flag.patch': Operation not supported cp: preserving ACL for `ntl-6.1.0.p0/patches/libtool_flag.patch': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0/patches': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0/package-version.txt': Operation not supported cp: preserving ACL for `ntl-6.1.0.p0/package-version.txt': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0/spkg-src': Operation not supported cp: preserving ACL for `ntl-6.1.0.p0/spkg-src': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0/checksums.ini': Operation not supported cp: preserving ACL for `ntl-6.1.0.p0/checksums.ini': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0/spkg-check': Operation not supported cp: preserving ACL for `ntl-6.1.0.p0/spkg-check': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0/spkg-install': Operation not supported cp: preserving ACL for `ntl-6.1.0.p0/spkg-install': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0/SPKG.txt': Operation not supported cp: preserving ACL for `ntl-6.1.0.p0/SPKG.txt': Operation not supported cp: preserving permissions for `ntl-6.1.0.p0': Operation not supported /home/modell/pkg/sage/sage-6.3/local/var/tmp/sage/build/ntl-6.1.0.p0 mv: cannot stat `ntl-6.1.0*': No such file or directory Finished set up **************************************************** Host system: Linux bacchus 2.6.18-371.4.1.el5xen #1 SMP Wed Jan 8 18:46:45 EST 2014 x86_64 x86_64 x86_64 GNU/Linux **************************************************** C compiler: /irsa/cm/env_1.9_mnt/core/bin/gcc C compiler version: Using built-in specs. COLLECT_GCC=/irsa/cm/env_1.9_mnt/core/bin/gcc COLLECT_LTO_WRAPPER=/stage/irsa-sw-dev-bacchus/cm/env_1.9_mnt/core/bin/../libexec/gcc/x86_64-unknown-linux-gnu/4.7.3/lto Target: x86_64-unknown-linux-gnu Configured with: ../gcc-4.7.3/configure --prefix=/irsa/cm/env_1.9_mnt/core --with-local-prefix=/irsa/cm/env_1.9_mnt/core Thread model: posix gcc version 4.7.3 (GCC) **************************************************** Generating libtool. . . . cp: preserving ACL for `/home/modell/pkg/sage/sage-6.3/local/include/NTL/vector.h': Operation not supported cp: preserving permissions for `/home/modell/pkg/sage/sage-6.3/local/include/NTL/version.h': Operation not supported cp: preserving ACL for `/home/modell/pkg/sage/sage-6.3/local/include/NTL/version.h': Operation not supported cp: preserving permissions for `/home/modell/pkg/sage/sage-6.3/local/include/NTL/xdouble.h': Operation not supported cp: preserving ACL for `/home/modell/pkg/sage/sage-6.3/local/include/NTL/xdouble.h': Operation not supported make[3]: *** [install] Error 1 make[3]: Leaving directory `/home/modell/pkg/sage/sage-6.3/local/var/tmp/sage/build/ntl-6.1.0.p0/src/ntl/src' Error installing NTL. real 14m11.742s user 12m46.224s sys 0m45.275s ************************************************************************ Error installing package ntl-6.1.0.p0 ************************************************************************ Please email sage-devel (http://groups.google.com/group/sage-devel) explaining the problem and including the relevant part of the log file /home/modell/pkg/sage/sage-6.3/logs/pkgs/ntl-6.1.0.p0.log Describe your computer, operating system, etc. If you want to try to fix the problem yourself, *don't* just cd to /home/modell/pkg/sage/sage-6.3/local/var/tmp/sage/build/ntl-6.1.0.p0 and type 'make' or whatever is appropriate. Instead, the following commands setup all environment variables correctly and load a subshell for you to debug the error: (cd '/home/modell/pkg/sage/sage-6.3/local/var/tmp/sage/build/ntl-6.1.0.p0' && '/home/modell/pkg/sage/sage-6.3/sage' -- When you are done debugging, you can type "exit" to leave the subshell. ************************************************************************ modell@bacchus$ pwd /home/modell/pkg/sage/sage-6.3/local/var/tmp/sage/build/ntl-6.1.0.p0 modell@bacchus$ ll drwxr-xr-x+ 4 modell irsa 10 Aug 21 11:55 . drwxrwxr-x 3 modell irsa 3 Aug 21 11:55 .. -rw-r--r--+ 1 modell irsa 1.1K Aug 10 04:29 SPKG.txt -rw-r--r--+ 1 modell irsa 128 Aug 10 04:29 checksums.ini -rw-r--r--+ 1 modell irsa 9 Aug 10 04:29 package-version.txt drwxr-xr-x+ 2 modell irsa 7 Aug 10 04:29 patches -rwxr-xr-x+ 1 modell irsa 51 Aug 10 04:29 spkg-check -rwxr-xr-x+ 1 modell irsa 2.8K Aug 10 04:29 spkg-install -rwxr-xr-x+ 1 modell irsa 726 Aug 10 04:29 spkg-src drwxrwxr-x 4 modell irsa 4 Apr 3 06:14 src modell@bacchus$ ll patches drwxr-xr-x+ 2 modell irsa 7 Aug 10 04:29 . drwxr-xr-x+ 4 modell irsa 10 Aug 21 11:55 .. -rw-r--r--+ 1 modell irsa 124 Aug 10 04:29 configure.ac -rw-r--r--+ 1 modell irsa 1.6K Aug 10 04:29 errorcallback.patch -rw-r--r--+ 1 modell irsa 1.5K Aug 10 04:29 libtool_flag.patch -rw-r--r--+ 1 modell irsa 1.6K Aug 10 04:29 make.patch -rw-r--r--+ 1 modell irsa 330 Aug 10 04:29 new_singular.patch modell@bacchus$ ll patches/errorcallback.patch -rw-r--r--+ 1 modell irsa 1.6K Aug 10 04:29 patches/errorcallback.patch modell@bacchus$ lld /home/modell/pkg/sage/sage-6.3/local/var/tmp/sage/build/ntl-6.1.0.p0/src/ntl/src drwxr-xr-x+ 3 modell irsa 295 Aug 21 12:09 /home/modell/pkg/sage/sage-6.3/local/var/tmp/sage/build/ntl-6.1.0.p0/src/ntl/src modell@bacchus$ cd src/bin /home/modell/pkg/sage/sage-6.3/src/bin modell@bacchus$ ll drwxr-xr-x+ 2 modell irsa 71 Aug 10 04:29 . drwxr-xr-x+ 9 modell irsa 15 Aug 10 04:29 .. -rwxr-xr-x+ 1 modell irsa 33K Aug 10 04:29 sage -rwxr-xr-x+ 1 modell irsa 5.9K Aug 10 04:29 sage-CSI -rw-r--r--+ 1 modell irsa 3.8K Aug 10 04:29 sage-CSI-helper.py -rw-r--r--+ 1 modell irsa 5.9K Aug 10 04:29 sage-README-osx.txt -rw-r--r--+ 1 modell irsa 804 Aug 10 04:29 sage-arch-env -rw-r--r--+ 1 modell irsa 647 Aug 10 04:29 sage-banner -rwxr-xr-x+ 1 modell irsa 4.1K Aug 10 04:29 sage-bdist -rwxr-xr-x+ 1 modell irsa 492 Aug 10 04:29 sage-build -rwxr-xr-x+ 1 modell irsa 664 Aug 10 04:29 sage-cachegrind -rwxr-xr-x+ 1 modell irsa 653 Aug 10 04:29 sage-callgrind -rwxr-xr-x+ 1 modell irsa 7.1K Aug 10 04:29 sage-cleaner -rwxr-xr-x+ 1 modell irsa 1.2K Aug 10 04:29 sage-clone-source -rwxr-xr-x+ 1 modell irsa 6.5K Aug 10 04:29 sage-coverage -rwxr-xr-x+ 1 modell irsa 1.2K Aug 10 04:29 sage-coverageall -rwxr-xr-x+ 1 modell irsa 22K Aug 10 04:29 sage-crap -rwxr-xr-x+ 1 modell irsa 1.1K Aug 10 04:29 sage-cython -rwxr-xr-x+ 1 modell irsa 11K Aug 10 04:29 sage-dev -rwxr-xr-x+ 1 modell irsa 3.2K Aug 10 04:29 sage-download-file -rwxr-xr-x+ 1 modell irsa 136 Aug 10 04:29 sage-download-upstream -rw-r--r--+ 1 modell irsa 22K Aug 10 04:29 sage-env -rwxr-xr-x+ 1 modell irsa 394 Aug 10 04:29 sage-eval -rwxr-xr-x+ 1 modell irsa 1.5K Aug 10 04:29 sage-fix-pkg-checksums -rwxr-xr-x+ 1 modell irsa 5.1K Aug 10 04:29 sage-fixdoctests -rw-r--r--+ 1 modell irsa 2 Aug 10 04:29 sage-gdb-commands -rwxr-xr-x+ 1 modell irsa 109 Aug 10 04:29 sage-grep -rwxr-xr-x+ 1 modell irsa 110 Aug 10 04:29 sage-grepdoc -rwxr-xr-x+ 1 modell irsa 251 Aug 10 04:29 sage-inline-fortran -rwxr-xr-x+ 1 modell irsa 326 Aug 10 04:29 sage-ipython -rwxr-xr-x+ 1 modell irsa 53 Aug 10 04:29 sage-list-experimental -rwxr-xr-x+ 1 modell irsa 49 Aug 10 04:29 sage-list-optional -rwxr-xr-x+ 1 modell irsa 2.5K Aug 10 04:29 sage-list-packages -rwxr-xr-x+ 1 modell irsa 49 Aug 10 04:29 sage-list-standard -rwxr-xr-x+ 1 modell irsa 11K Aug 10 04:29 sage-location -rwxr-xr-x+ 1 modell irsa 626 Aug 10 04:29 sage-massif -rw-r--r--+ 1 modell irsa 163 Aug 10 04:29 sage-maxima.lisp -rwxr-xr-x+ 1 modell irsa 169 Aug 10 04:29 sage-native-execute -rwxr-xr-x+ 1 modell irsa 726 Aug 10 04:29 sage-notebook -rwxr-xr-x+ 1 modell irsa 301 Aug 10 04:29 sage-notebook-insecure -rwxr-xr-x+ 1 modell irsa 5.7K Aug 10 04:29 sage-num-threads.py -rwxr-xr-x+ 1 modell irsa 608 Aug 10 04:29 sage-omega -rwxr-xr-x+ 1 modell irsa 221 Aug 10 04:29 sage-open -rwxr-xr-x+ 1 modell irsa 4.0K Aug 10 04:29 sage-pkg -rwxr-xr-x+ 1 modell irsa 7.6K Aug 10 04:29 sage-preparse -rwxr-xr-x+ 1 modell irsa 404 Aug 10 04:29 sage-pypkg-location -rwxr-xr-x+ 1 modell irsa 38 Aug 10 04:29 sage-python -rwxr-xr-x+ 1 modell irsa 875 Aug 10 04:29 sage-rebase.bat -rwxr-xr-x+ 1 modell irsa 569 Aug 10 04:29 sage-rebase.sh -rwxr-xr-x+ 1 modell irsa 1.1K Aug 10 04:29 sage-rebaseall.bat -rwxr-xr-x+ 1 modell irsa 848 Aug 10 04:29 sage-rebaseall.sh -rwxr-xr-x+ 1 modell irsa 4.6K Aug 10 04:29 sage-rst2sws -rwxr-xr-x+ 1 modell irsa 4.6K Aug 10 04:29 sage-rst2txt -rwxr-xr-x+ 1 modell irsa 4.2K Aug 10 04:29 sage-rsyncdist -rwxr-xr-x+ 1 modell irsa 824 Aug 10 04:29 sage-run -rwxr-xr-x+ 1 modell irsa 239 Aug 10 04:29 sage-run-cython -rwxr-xr-x+ 1 modell irsa 5.5K Aug 10 04:29 sage-runtests -rwxr-xr-x+ 1 modell irsa 1.5K Aug 10 04:29 sage-sdist -rwxr-xr-x+ 1 modell irsa 26K Aug 10 04:29 sage-spkg -rwxr-xr-x+ 1 modell irsa 1.1K Aug 10 04:29 sage-starts -rwxr-xr-x+ 1 modell irsa 4.8K Aug 10 04:29 sage-startuptime.py -rwxr-xr-x+ 1 modell irsa 6.4K Aug 10 04:29 sage-sws2rst -rw-r--r--+ 1 modell irsa 1.6K Aug 10 04:29 sage-test-import -rwxr-xr-x+ 1 modell irsa 647 Aug 10 04:29 sage-update-src -rwxr-xr-x+ 1 modell irsa 2.2K Aug 10 04:29 sage-update-version -rwxr-xr-x+ 1 modell irsa 241 Aug 10 04:29 sage-upgrade -rwxr-xr-x+ 1 modell irsa 747 Aug 10 04:29 sage-valgrind -rw-r--r--+ 1 modell irsa 173 Aug 10 04:29 sage-version.sh -rwxr-xr-x+ 1 modell irsa 3.4K Aug 10 04:29 testcc.sh -rwxr-xr-x+ 1 modell irsa 3.7K Aug 10 04:29 testcflags.sh -rwxr-xr-x+ 1 modell irsa 3.2K Aug 10 04:29 testcxx.sh modell@bacchus$ cp --version cp (GNU coreutils) 5.97 Copyright (C) 2006 Free Software Foundation, Inc. This is free software. You may redistribute copies of it under the terms of the GNU General Public License <http://www.gnu.org/licenses/gpl.html>. There is NO WARRANTY, to the extent permitted by law. Written by Torbjorn Granlund, David MacKenzie, and Jim Meyering. modell@bacchus$ date Fri Aug 22 10:38:27 PDT 2014 x86_64 Linux 2.6.18-371.4.1.el5xen modell@bacchus$ uname -a Linux bacchus 2.6.18-371.4.1.el5xen #1 SMP Wed Jan 8 18:46:45 EST 2014 x86_64 x86_64 x86_64 GNU/Linux -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/sage-devel. For more options, visit https://groups.google.com/d/optout.
