Are there any examples of this being done in Sage currently with some Java
> code?
>
I don't believe so - as William points out, jmol is the only thing in Sage
proper that even uses Java (and is executed definitely not using a library
interface, but just by asking it to start using the shell), and the only
optional (well, experimental) package I can think of that uses Java is
polymake, a package which has been notorious for some time for *not*
working properly and needing all sorts of tlc - but even here I think we
would just use "--without-java" and be done with it since we wouldn't be
using the GUI.
- kcrisman
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