Le dimanche 19 février 2017 20:34:57 UTC+1, Emmanuel Charpentier a écrit : > > > > Le dimanche 19 février 2017 19:54:06 UTC+1, Dima Pasechnik a écrit : >> >> >> >> On Sunday, February 19, 2017 at 6:42:07 PM UTC, Emmanuel Charpentier >> wrote: >>> >>> That log is attached to the first message of this thread. BTW, it is >>> suspiciously short... >>> >> >> looks good to me. >> >> >>> >>> Should I try to force a reinstallation ? >>> >> > >> >> well, I guess, yes, followed by "make build" just in case... >> > > Runninfg. Stay tuned. >
Logs attached. Next suggestion ? HTH, -- Emmanuel Charpentier > >> It would also be good to see the output of >> >> sage --gap >> >> (there should be >> Components: trans 1.0, prim 2.1, small* 1.0, id* 1.0 >> there, in case database_gap was installed OK) >> > > It does : > charpent@asus16-ec:~$ sage -gap > ┌───────┐ GAP 4.8.6, 12-Nov-2016, build of 2017-02-19 01:09:54 (CET) > │ GAP │ http://www.gap-system.org > └───────┘ Architecture: x86_64-pc-linux-gnu-gcc-default64 > Libs used: gmp, readline > Loading the library and packages ... > Components: trans 1.0, prim 2.1, small* 1.0, id* 1.0 > Packages: GAPDoc 1.5.1 > Try '??help' for help. See also '?copyright', '?cite' and '?authors' > gap> > > HTH, > > -- > Emmanuel Charpentier > > >> >> >> >>> >>> -- >>> Emmanuel Charpentier >>> >>> Le dimanche 19 février 2017 19:37:08 UTC+1, Dima Pasechnik a écrit : >>>> >>>> Your log contains a lot of stuff like >>>> >>>> TypeError: unsupported operand type(s) for +: 'NoneType' and 'int' >>>> ------------------------------------------------------------ >>>> verbose 0 (2059: permgroup_named.py, cardinality) Warning: >>>> TransitiveGroups requires the GAP database package. Please install it with >>>> ``sage -i database_gap``. >>>> >>>> That is, you failed to install the package(s) in question... >>>> Anything interesting in logs/pkgs/database_gap-4.8.6.log ? >>>> >>>> >>>> On Sunday, February 19, 2017 at 11:37:27 AM UTC, Emmanuel Charpentier >>>> wrote: >>>>> >>>>> I noticed that installing database_gap gives a *lot* of new doctest >>>>> failures, not all of them reproducible. >>>>> >>>>> I tested Sage 7.6.beta4 + the patches giving us R 3.3.2 (see this >>>>> <https://groups.google.com/d/msg/sage-devel/j7ARbIM1wjU/Rl3o_Bc9BgAJ>, >>>>> by the way...), to which I added got2tex, giagpy_sage and fricas. This >>>>> passes ptestlong with the only (well-known) reproducible error : >>>>> charpent@asus16-ec:/usr/local/sage-7$ sage -t --long --warn-long 106.9 >>>>> src/sage/rings/polynomial/multi_polynomial_ideal.py >>>>> Running doctests with ID 2017-02-19-12-15-01-f918671b. >>>>> Git branch: checkR >>>>> Using --optional=database_gap,giacpy_sage,mpir,python2,sage >>>>> Doctesting 1 file. >>>>> sage -t --long --warn-long 106.9 >>>>> src/sage/rings/polynomial/multi_polynomial_ideal.py >>>>> ********************************************************************** >>>>> File "src/sage/rings/polynomial/multi_polynomial_ideal.py", line 3533, >>>>> in >>>>> sage.rings.polynomial.multi_polynomial_ideal.NCPolynomialIdeal.groebner_basis >>>>> Failed example: >>>>> ideal(J.transformed_basis()).change_ring(P).interreduced_basis() >>>>> # optional - giacpy_sage >>>>> Expected: >>>>> [a - 60*c^3 + 158/7*c^2 + 8/7*c - 1, b + 30*c^3 - 79/7*c^2 + >>>>> 3/7*c, c^4 - 10/21*c^3 + 1/84*c^2 + 1/84*c] >>>>> Got: >>>>> [7*a - 420*c^3 + 158*c^2 + 8*c - 7, 7*b + 210*c^3 - 79*c^2 + 3*c, >>>>> 84*c^4 - 40*c^3 + c^2 + c] >>>>> ********************************************************************** >>>>> 1 item had failures: >>>>> 1 of 67 in >>>>> sage.rings.polynomial.multi_polynomial_ideal.NCPolynomialIdeal.groebner_basis >>>>> [727 tests, 1 failure, 9.06 s] >>>>> ---------------------------------------------------------------------- >>>>> sage -t --long --warn-long 106.9 >>>>> src/sage/rings/polynomial/multi_polynomial_ideal.py # 1 doctest failed >>>>> ---------------------------------------------------------------------- >>>>> Total time for all tests: 9.2 seconds >>>>> cpu time: 9.7 seconds >>>>> cumulative wall time: 9.1 seconds >>>>> >>>>> Adding database_gap to the mix gave me a slew or new errors : >>>>> ---------------------------------------------------------------------- >>>>> sage -t --long --warn-long 112.2 >>>>> src/sage/rings/number_field/number_field.py # 3 doctests failed >>>>> sage -t --long --warn-long 112.2 >>>>> src/sage/groups/perm_gps/permgroup.py # 11 doctests failed >>>>> sage -t --long --warn-long 112.2 >>>>> src/sage/groups/perm_gps/permgroup_named.py # 52 doctests failed >>>>> sage -t --long --warn-long 112.2 >>>>> src/sage/rings/polynomial/multi_polynomial_ideal.py # 1 doctest failed >>>>> sage -t --long --warn-long 112.2 >>>>> src/sage/homology/simplicial_complex.py # 1 doctest failed >>>>> sage -t --long --warn-long 112.2 src/sage/groups/generic.py # 5 >>>>> doctests failed >>>>> sage -t --long --warn-long 112.2 >>>>> src/sage/combinat/integer_vectors_mod_permgroup.py # 2 doctests failed >>>>> sage -t --long --warn-long 112.2 >>>>> src/sage/rings/polynomial/polynomial_rational_flint.pyx # 4 doctests >>>>> failed >>>>> sage -t --long --warn-long 112.2 >>>>> src/sage/rings/number_field/galois_group.py # 2 doctests failed >>>>> sage -t --long --warn-long 112.2 src/doc/ru/tutorial/interfaces.rst # >>>>> 2 doctests failed >>>>> sage -t --long --warn-long 112.2 src/doc/de/tutorial/interfaces.rst # >>>>> 2 doctests failed >>>>> sage -t --long --warn-long 112.2 >>>>> src/sage/combinat/sloane_functions.py # 2 doctests failed >>>>> sage -t --long --warn-long 112.2 src/doc/pt/tutorial/interfaces.rst # >>>>> 2 doctests failed >>>>> sage -t --long --warn-long 112.2 src/doc/ja/tutorial/interfaces.rst # >>>>> 2 doctests failed >>>>> sage -t --long --warn-long 112.2 src/doc/en/tutorial/interfaces.rst # >>>>> 2 doctests failed >>>>> sage -t --long --warn-long 112.2 src/doc/en/constructions/groups.rst >>>>> # 1 doctest failed >>>>> sage -t --long --warn-long 112.2 src/doc/fr/tutorial/interfaces.rst # >>>>> 2 doctests failed >>>>> sage -t --long --warn-long 112.2 >>>>> src/sage/categories/finite_permutation_groups.py # 1 doctest failed >>>>> sage -t --long --warn-long 112.2 >>>>> src/sage/matrix/matrix_modn_dense_template.pxi # Timed out >>>>> ---------------------------------------------------------------------- >>>>> >>>>> (collected in the enclosed file errors.in). >>>>> >>>>> Re-running them (by the simple expedient of source errors.in > >>>>> errors.out 2>&1) showed that those errors are not transient (see the >>>>> enclosed file errors.out). >>>>> >>>>> I also enclose the installation log of database_gap, as well as the >>>>> ptestlong logs before and after database_gap installation ; all files are >>>>> gzipped. >>>>> >>>>> I *think* that this is ticket-worthy, but I'd be delighted to be >>>>> pointed to the direction and magnitude of my stupidity by someone wiser >>>>> than me... >>>>> >>>>> HTH, >>>>> >>>>> -- >>>>> Emmanuel Charpentier >>>>> >>>> -- You received this message because you are subscribed to the Google Groups "sage-devel" group. 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make_build.log.gz
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reinstall_database_gap.log.gz
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