Salut Sébastien,

- Is it with or without PyNormaliz installed?
- You should run a profiler on both versions and give a more complete
  report than a timing difference.

Best
Vincent

Le 20/06/2019 à 16:59, Sébastien Labbé a écrit :
Dear sage-devel,

The proof of the main result of my last preprint
[https://arxiv.org/abs/1906.01104] can be reproduced in Sage-8.7 + my
optional slabbe package. The code is provided in appendix and is also
available at
https://github.com/seblabbe/slabbe/blob/develop/demos/arXiv_1906_01104.rst.

With sage-8.7 + slabbe-0.5.1, I can reproduce the computations and it takes
less than 15 seconds:

$ ~/GitBox/sage-8.7/sage -t arXiv_1906_01104.rst
Using --optional=dochtml,memlimit,mpir,python2,sage
Doctesting 1 file.
sage -t arXiv_1906_01104.rst
     [41 tests, 14.66 s]
----------------------------------------------------------------------
All tests passed!
----------------------------------------------------------------------
Total time for all tests: 14.7 seconds
     cpu time: 14.7 seconds
     cumulative wall time: 14.7 seconds

With sage-8.8.rc1 + slabbe-0.5.1, the first operations takes much longer
and eventually dies with

----------------------------------------------------------------------
sage -t arXiv_1906_01104.rst  # Timed out
----------------------------------------------------------------------
Total time for all tests: 304.9 seconds
     cpu time: 0.0 seconds
     cumulative wall time: 0.0 seconds

The operations that I perform are essentially translations and
intersections of polygons with vertices in the Number Field in phi with
defining polynomial z^2 - z - 1. I am using the default backend 'field'. I
know that some progress has been done with respect to polyhedron recently.
Therefore, I was expecting to gain some efficiency by defining explicitly
the polyhedron backend (like normaliz), but I was not expecting such a
regression for the default with no backend provided.

I also noticed the following modification for the base ring (nb field
*with* embedding) I am using (see below). Can this be an explanation for
operations to be slower?

┌────────────────────────────────────────────────────────────────────┐
│ SageMath version 8.7, Release Date: 2019-03-23                     │
│ Using Python 2.7.15. Type "help()" for help.                       │
└────────────────────────────────────────────────────────────────────┘
sage: z = polygen(QQ, 'z')
sage: K = NumberField(z**2-z-1, 'phi', embedding=RR(1.6))
sage: K
Number Field in phi with defining polynomial z^2 - z - 1

┌────────────────────────────────────────────────────────────────────┐
│ SageMath version 8.8.rc1, Release Date: 2019-06-13                 │
│ Using Python 2.7.15. Type "help()" for help.                       │
└────────────────────────────────────────────────────────────────────┘
sage: z = polygen(QQ, 'z')
sage: K = NumberField(z**2-z-1, 'phi', embedding=RR(1.6))
sage: K
Number Field in phi with defining polynomial z^2 - z - 1 with phi =
1.618033988749895?


Thanks for any pointers,

Sébastien


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