This is a known Fortran/C interface problem, being addressed by gcc people.
The easiest would be to use R from the system.
Actually, to minimise building, you can do
$ sudo apt-get install bc binutils bzip2 ca-certificates cliquer
curl g++ g++ gcc gcc gfan gfortran git gmp-ecm lcalc libboost-dev
libbz2-dev libcliquer-dev libcurl4-openssl-dev libec-dev libecm-dev
libffi-dev libflint-arb-dev libflint-dev libfreetype6-dev libgd-dev
libgf2x-dev libgivaro-dev libgmp-dev libgsl-dev liblfunction-dev
liblrcalc-dev liblzma-dev libm4rie-dev libmpc-dev libmpfi-dev
libmpfr-dev libncurses5-dev libntl-dev libopenblas-dev libpari-dev
libpcre3-dev libreadline-dev librw-dev libsqlite3-dev
libsymmetrica2-dev libz-dev libzmq3-dev m4 make nauty pari-elldata
pari-galdata pari-galpol pari-gp2c pari-seadata patch perl pkg-config
python3 r-base-dev tachyon tar xz-utils yasm cmake coinor-cbc
coinor-libcbc-dev libboost-dev libisl-dev libterm-readline-gnu-perl
ninja-build
to get more or less everything covered by https://trac.sagemath.org/ticket/27330
and then "make distclean && ./bootstrap && ./configure && make build"
On Wed, Mar 4, 2020 at 8:45 AM Daniel Krenn <[email protected]> wrote:
>
> On 02.03.20 01:22, Volker Braun wrote:
> > As always, you can get the latest beta version from the "develop" git
> > branch. Alternatively, the self-contained source tarball is at
> > http://www.sagemath.org/download-latest.html
>
> Compiling from in new directory breaks with the following error for
> R-3.6.2.p0:
>
> ../../src/include/R_ext/BLAS.h:103:55: error: expected declaration
> specifiers or '...' before ')' token
> 103 | const double *beta, double *y, const int *incy FCLEN);
> | ^
>
> After that many more errors appear. This is on an up-to-date Ubuntu
> machine. This also happens when building 9.0 (instead of the current beta)
> Is this known? What to do?
>
> Full log below.
>
> Best, Daniel
>
>
> Found local metadata for r-3.6.2.p0
> Attempting to download package R-3.6.2.tar.gz from mirrors
> https://mirror.koddos.net/sagemath/spkg/upstream/r/R-3.6.2.tar.gz
> [......................................................................]
> r-3.6.2.p0
> ====================================================
> Setting up build directory for r-3.6.2.p0
> Finished extraction
> Applying patches from ../patches...
> Applying ../patches/autoconf_verb_dash.patch
> patching file configure
> Hunk #1 succeeded at 24966 with fuzz 2 (offset 129 lines).
> Hunk #2 succeeded at 25323 (offset 130 lines).
> Applying ../patches/cygwin_build_support.patch
> patching file configure
> Hunk #1 succeeded at 27637 (offset -86 lines).
> Hunk #2 succeeded at 27879 (offset -117 lines).
> Hunk #3 succeeded at 27892 (offset -117 lines).
> Hunk #4 succeeded at 27905 (offset -117 lines).
> patching file configure.ac
> Hunk #1 succeeded at 1280 (offset -14 lines).
> Hunk #2 succeeded at 1537 (offset -14 lines).
> Hunk #3 succeeded at 1549 (offset -14 lines).
> Hunk #4 succeeded at 1561 (offset -14 lines).
> patching file src/library/tools/R/install.R
> Hunk #1 succeeded at 1215 (offset 374 lines).
> Applying ../patches/hardcoded_dirs.patch
> patching file src/scripts/Makefile.in
> Hunk #1 succeeded at 87 (offset -2 lines).
> patching file src/scripts/R.sh.in
> Applying ../patches/libcurl_https_support.patch
> patching file configure
> Hunk #1 succeeded at 42943 (offset 1874 lines).
> Hunk #2 succeeded at 42952 (offset 1874 lines).
> patching file m4/R.m4
> Hunk #1 succeeded at 4181 (offset -24 lines).
> Applying ../patches/link_all_shared_libs.patch
> patching file etc/Makeconf.in
> Hunk #1 succeeded at 159 with fuzz 2 (offset 9 lines).
> Applying ../patches/m4_macro_bug.patch
> patching file configure
> Hunk #1 succeeded at 42543 (offset 1744 lines).
> Hunk #2 succeeded at 42587 with fuzz 2 (offset 1744 lines).
> patching file m4/R.m4
> Hunk #1 succeeded at 3100 (offset -90 lines).
> Hunk #2 succeeded at 3122 with fuzz 2 (offset -90 lines).
> Applying ../patches/rcmd_exec.patch
> patching file src/scripts/Rcmd.in
> ****************************************************
> Host system:
> Linux mat21955 5.3.0-29-generic #31-Ubuntu SMP Fri Jan 17 17:27:26 UTC
> 2020 x86_64 x86_64 x86_64 GNU/Linux
> ****************************************************
> C compiler: gcc
> C compiler version:
> Using built-in specs.
> COLLECT_GCC=gcc
> COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/9/lto-wrapper
> OFFLOAD_TARGET_NAMES=nvptx-none:hsa
> OFFLOAD_TARGET_DEFAULT=1
> Target: x86_64-linux-gnu
> Configured with: ../src/configure -v --with-pkgversion='Ubuntu
> 9.2.1-9ubuntu2' --with-bugurl=file:///usr/share/doc/gcc-9/README.Bugs
> --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2
> --prefix=/usr --with-gcc-major-version-only --program-suffix=-9
> --program-prefix=x86_64-linux-gnu- --enable-shared
> --enable-linker-build-id --libexecdir=/usr/lib
> --without-included-gettext --enable-threads=posix --libdir=/usr/lib
> --enable-nls --enable-bootstrap --enable-clocale=gnu
> --enable-libstdcxx-debug --enable-libstdcxx-time=yes
> --with-default-libstdcxx-abi=new --enable-gnu-unique-object
> --disable-vtable-verify --enable-plugin --enable-default-pie
> --with-system-zlib --with-target-system-zlib=auto --enable-multiarch
> --disable-werror --with-arch-32=i686 --with-abi=m64
> --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic
> --enable-offload-targets=nvptx-none,hsa --without-cuda-driver
> --enable-checking=release --build=x86_64-linux-gnu
> --host=x86_64-linux-gnu --target=x86_64-linux-gnu
> Thread model: posix
> gcc version 9.2.1 20191008 (Ubuntu 9.2.1-9ubuntu2)
> ****************************************************
> Uninstalling 'r' with legacy uninstaller
> Package 'r' is currently not installed
> R_CONFIGURE_BLAS=--with-blas=-L/opt/sage/9.0/local/lib -lopenblas
> R_CONFIGURE_LAPACK=--with-lapack=-L/opt/sage/9.0/local/lib -lopenblas
> Configuring r-3.6.2.p0
> configure: WARNING: unrecognized options: --disable-dependency-tracking
> checking build system type... x86_64-pc-linux-gnu
> checking host system type... x86_64-pc-linux-gnu
> loading site script './config.site'
> loading build-specific script './config.site'
> checking for pwd... /usr/bin/pwd
> checking whether builddir is srcdir... yes
> checking whether ln -s works... yes
> checking for ar... ar
> checking for a BSD-compatible install... /usr/bin/install -c
> checking for sed... /usr/bin/sed
> checking for which... /usr/bin/which
> checking for less... /usr/bin/less
> checking for gtar... no
> checking for gnutar... no
> checking for tar... /usr/bin/tar
> checking for tex... no
> checking for pdftex... no
> configure: WARNING: you cannot build PDF versions of the R manuals
> checking for pdflatex... no
> configure: WARNING: you cannot build PDF versions of vignettes and help
> pages
> checking for makeindex... no
> checking for texi2any... no
> configure: WARNING: you cannot build info or HTML versions of the R manuals
> checking for texi2dvi... no
> checking for kpsewhich... no
> checking for latex inconsolata package... checking for unzip...
> /usr/bin/unzip
> checking for zip... /usr/bin/zip
> checking for gzip... /usr/bin/gzip
> checking for bzip2... /opt/sage/9.0/local/bin/bzip2
> checking for firefox... /usr/bin/firefox
> using default browser ... /usr/bin/firefox
> checking for acroread... no
> checking for acroread4... no
> checking for xdg-open... /usr/bin/xdg-open
> checking for working aclocal... missing
> checking for working autoconf... missing
> checking for working autoheader... missing
> checking for bison... no
> checking for byacc... no
> checking for yacc... no
> checking for notangle... false
> checking for realpath... /usr/bin/realpath
> checking for pkg-config... /usr/bin/pkg-config
> checking for gcc... gcc
> checking whether the C compiler works... yes
> checking for C compiler default output file name... a.out
> checking for suffix of executables...
> checking whether we are cross compiling... no
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether gcc accepts -g... yes
> checking for gcc option to accept ISO C89... none needed
> checking how to run the C preprocessor... gcc -E
> checking for grep that handles long lines and -e... /usr/bin/grep
> checking for egrep... /usr/bin/grep -E
> checking whether gcc needs -traditional... no
> checking for ANSI C header files... yes
> checking for sys/types.h... yes
> checking for sys/stat.h... yes
> checking for stdlib.h... yes
> checking for string.h... yes
> checking for memory.h... yes
> checking for strings.h... yes
> checking for inttypes.h... yes
> checking for stdint.h... yes
> checking for unistd.h... yes
> checking minix/config.h usability... no
> checking minix/config.h presence... no
> checking for minix/config.h... no
> checking whether it is safe to define __EXTENSIONS__... yes
> checking how to run the C preprocessor... gcc -E
> looking for a modern Fortran compiler
> checking whether we are using the GNU Fortran compiler... yes
> checking whether gfortran accepts -g... yes
> checking whether we are using the GNU C++ compiler... yes
> checking whether g++ -std=gnu++11 accepts -g... yes
> checking whether g++ -std=gnu++11 -g -O2 can compile C++ code... yes
> checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
> checking whether __attribute__((visibility())) is supported... yes
> checking whether gcc accepts -fvisibility... yes
> checking whether g++ -std=gnu++11 accepts -fvisibility... yes
> checking whether gfortran accepts -fvisibility... yes
> checking for gcc... gcc
> checking whether we are using the GNU Objective C compiler... no
> checking whether gcc accepts -g... no
> checking whether g++ -std=gnu++11 can compile ObjC++... no
> checking whether can compile ObjC++... no
> checking for Objective C++ compiler... no working ObjC++ compiler found
> checking how to print strings... printf
> checking for a sed that does not truncate output... (cached) /usr/bin/sed
> checking for fgrep... /usr/bin/grep -F
> checking for ld used by gcc... ld
> checking if the linker (ld) is GNU ld... yes
> checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
> checking the name lister (/usr/bin/nm -B) interface... BSD nm
> checking the maximum length of command line arguments... 1572864
> checking how to convert x86_64-pc-linux-gnu file names to
> x86_64-pc-linux-gnu format... func_convert_file_noop
> checking how to convert x86_64-pc-linux-gnu file names to toolchain
> format... func_convert_file_noop
> checking for ld option to reload object files... -r
> checking for objdump... objdump
> checking how to recognize dependent libraries... pass_all
> checking for dlltool... no
> checking how to associate runtime and link libraries... printf %s\n
> checking for archiver @FILE support... @
> checking for strip... strip
> checking for ranlib... ranlib
> checking for gawk... no
> checking for mawk... mawk
> checking command to parse /usr/bin/nm -B output from gcc object... ok
> checking for sysroot... no
> checking for a working dd... /usr/bin/dd
> checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
> checking for mt... mt
> checking if mt is a manifest tool... no
> checking for dlfcn.h... yes
> checking for objdir... .libs
> checking if gcc supports -fno-rtti -fno-exceptions... no
> checking for gcc option to produce PIC... -fPIC -DPIC
> checking if gcc PIC flag -fPIC -DPIC works... yes
> checking if gcc static flag -static works... yes
> checking if gcc supports -c -o file.o... yes
> checking if gcc supports -c -o file.o... (cached) yes
> checking whether the gcc linker (ld -m elf_x86_64) supports shared
> libraries... yes
> checking whether -lc should be explicitly linked in... no
> checking dynamic linker characteristics... GNU/Linux ld.so
> checking how to hardcode library paths into programs... immediate
> checking whether stripping libraries is possible... yes
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... yes
> checking whether to build static libraries... no
> checking how to run the C++ preprocessor... g++ -std=gnu++11 -E
> checking for ld used by g++ -std=gnu++11... ld -m elf_x86_64
> checking if the linker (ld -m elf_x86_64) is GNU ld... yes
> checking whether the g++ -std=gnu++11 linker (ld -m elf_x86_64) supports
> shared libraries... yes
> checking for g++ -std=gnu++11 option to produce PIC... -fPIC -DPIC
> checking if g++ -std=gnu++11 PIC flag -fPIC -DPIC works... yes
> checking if g++ -std=gnu++11 static flag -static works... yes
> checking if g++ -std=gnu++11 supports -c -o file.o... yes
> checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes
> checking whether the g++ -std=gnu++11 linker (ld -m elf_x86_64) supports
> shared libraries... yes
> checking dynamic linker characteristics... (cached) GNU/Linux ld.so
> checking how to hardcode library paths into programs... immediate
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... yes
> checking whether to build static libraries... no
> checking for gfortran option to produce PIC... -fPIC
> checking if gfortran PIC flag -fPIC works... yes
> checking if gfortran static flag -static works... yes
> checking if gfortran supports -c -o file.o... yes
> checking if gfortran supports -c -o file.o... (cached) yes
> checking whether the gfortran linker (ld -m elf_x86_64) supports shared
> libraries... yes
> checking dynamic linker characteristics... (cached) GNU/Linux ld.so
> checking how to hardcode library paths into programs... immediate
> checking for cos in -lm... yes
> checking for sin in -lm... yes
> checking for dlopen in -ldl... yes
> checking readline/history.h usability... yes
> checking readline/history.h presence... yes
> checking for readline/history.h... yes
> checking readline/readline.h usability... yes
> checking readline/readline.h presence... yes
> checking for readline/readline.h... yes
> checking for rl_callback_read_char in -lreadline... yes
> checking for history_truncate_file... yes
> checking for tilde_expand_word... yes
> checking whether rl_callback_sigcleanup exists and is declared... no
> checking whether rl_completion_matches exists and is declared... yes
> checking whether rl_resize_terminal exists and is declared... yes
> checking whether rl_sort_completion_matches exists and is declared... yes
> checking for ANSI C header files... (cached) yes
> checking for dirent.h that defines DIR... yes
> checking for library containing opendir... none required
> checking for sys/wait.h that is POSIX.1 compatible... yes
> checking for dlfcn.h... (cached) yes
> checking fcntl.h usability... yes
> checking fcntl.h presence... yes
> checking for fcntl.h... yes
> checking glob.h usability... yes
> checking glob.h presence... yes
> checking for glob.h... yes
> checking grp.h usability... yes
> checking grp.h presence... yes
> checking for grp.h... yes
> checking pwd.h usability... yes
> checking pwd.h presence... yes
> checking for pwd.h... yes
> checking sched.h usability... yes
> checking sched.h presence... yes
> checking for sched.h... yes
> checking for strings.h... (cached) yes
> checking sys/resource.h usability... yes
> checking sys/resource.h presence... yes
> checking for sys/resource.h... yes
> checking sys/select.h usability... yes
> checking sys/select.h presence... yes
> checking for sys/select.h... yes
> checking sys/socket.h usability... yes
> checking sys/socket.h presence... yes
> checking for sys/socket.h... yes
> checking for sys/stat.h... (cached) yes
> checking sys/time.h usability... yes
> checking sys/time.h presence... yes
> checking for sys/time.h... yes
> checking sys/times.h usability... yes
> checking sys/times.h presence... yes
> checking for sys/times.h... yes
> checking sys/utsname.h usability... yes
> checking sys/utsname.h presence... yes
> checking for sys/utsname.h... yes
> checking for unistd.h... (cached) yes
> checking utime.h usability... yes
> checking utime.h presence... yes
> checking for utime.h... yes
> checking arpa/inet.h usability... yes
> checking arpa/inet.h presence... yes
> checking for arpa/inet.h... yes
> checking elf.h usability... yes
> checking elf.h presence... yes
> checking for elf.h... yes
> checking features.h usability... yes
> checking features.h presence... yes
> checking for features.h... yes
> checking floatingpoint.h usability... no
> checking floatingpoint.h presence... no
> checking for floatingpoint.h... no
> checking langinfo.h usability... yes
> checking langinfo.h presence... yes
> checking for langinfo.h... yes
> checking netdb.h usability... yes
> checking netdb.h presence... yes
> checking for netdb.h... yes
> checking netinet/in.h usability... yes
> checking netinet/in.h presence... yes
> checking for netinet/in.h... yes
> checking sys/param.h usability... yes
> checking sys/param.h presence... yes
> checking for sys/param.h... yes
> checking stdalign.h usability... yes
> checking stdalign.h presence... yes
> checking for stdalign.h... yes
> checking errno.h usability... yes
> checking errno.h presence... yes
> checking for errno.h... yes
> checking for inttypes.h... (cached) yes
> checking limits.h usability... yes
> checking limits.h presence... yes
> checking for limits.h... yes
> checking locale.h usability... yes
> checking locale.h presence... yes
> checking for locale.h... yes
> checking stdarg.h usability... yes
> checking stdarg.h presence... yes
> checking for stdarg.h... yes
> checking stdbool.h usability... yes
> checking stdbool.h presence... yes
> checking for stdbool.h... yes
> checking for stdint.h... (cached) yes
> checking for string.h... (cached) yes
> checking whether setjmp.h is POSIX.1 compatible... yes
> checking whether sigsetjmp is declared... yes
> checking whether siglongjmp is declared... yes
> checking for GNU C library with version >= 2... yes
> checking return type of signal handlers... void
> checking for uint64_t... yes
> checking for int64_t... yes
> checking for int_fast64_t... yes
> checking for pid_t... yes
> checking for size_t... yes
> checking whether SIZE_MAX is declared... yes
> checking for blkcnt_t... yes
> checking for type of socket length... socklen_t *
> checking for stack_t... yes
> checking for intptr_t... yes
> checking for uintptr_t... yes
> checking whether byte ordering is bigendian... no
> checking for an ANSI C-conforming const... yes
> checking for gcc option to accept ISO C99... none needed
> checking for gcc option to accept ISO Standard C... (cached) none needed
> checking for inline... inline
> checking size of int... 4
> checking size of long... 8
> checking size of long long... 8
> checking size of double... 8
> checking size of size_t... 8
> checking for C stack direction... down
> checking size of long double... 16
> checking whether we can compute C Make dependencies... yes, using $(CC) -MM
> checking whether gcc supports -c -o FILE.lo... yes
> checking for gcc option to support OpenMP... -fopenmp
> checking how to get verbose linking output from gfortran... -###
> checking for Fortran libraries of gfortran... -L/opt/sage/9.0/local/lib
> -L/opt/sage/9.0/local/lib/../lib
> -L/opt/sage/9.0/local/lib/gcc/x86_64-pc-linux-gnu/9.2.0
> -L/opt/sage/9.0/local/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../lib
> -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu
> -L/usr/lib/../lib
> -L/opt/sage/9.0/local/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../..
> -lgfortran -lm -lquadmath
> checking how to get verbose linking output from gcc... -###
> checking for C libraries of gcc... -L/opt/sage/9.0/local/lib
> -L/opt/sage/9.0/local/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9
> -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu
> -L/usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib
> -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu
> -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/9/../../.. -lgcc_s
> checking for dummy main to link with Fortran libraries... none
> checking for Fortran name-mangling scheme... lower case, underscore, no
> extra underscore
> checking whether gfortran appends underscores to external names... yes
> checking whether gfortran appends extra underscores to external names... no
> checking whether mixed C/Fortran code can be run... yes
> checking whether gfortran and gcc agree on int and double... yes
> checking whether gfortran and gcc agree on double complex... yes
> checking for gfortran option to support OpenMP... -fopenmp
> checking whether g++ -std=gnu++11 accepts -M for generating
> dependencies... yes
> checking whether we can compute ObjC Make dependencies... no
> checking if need -fno-optimize-sibling-calls for gfortran... yes
> checking for type of 'hidden' Fortran character lengths...
> checking for xmkmf... no
> checking whether g++ -std=gnu++11 supports C++98 features with
> -std=gnu++98... yes
> checking whether g++ -std=gnu++11 supports C++11 features with
> -std=gnu++11... yes
> checking whether g++ -std=gnu++11 supports C++14 features with
> -std=gnu++14... yes
> checking whether g++ -std=gnu++11 supports C++17 features with
> -std=gnu++17... yes
> checking for g++ -std=gnu++11 -std=gnu++11 option to support OpenMP...
> -fopenmp
> checking for option providing pthread_kill... none required
> checking whether POSIX threads are supported... yes
> checking for off_t... yes
> checking for working alloca.h... yes
> checking for alloca... yes
> checking whether alloca is declared... yes
> checking whether expm1 exists and is declared... yes
> checking whether hypot exists and is declared... yes
> checking whether log1p exists and is declared... yes
> checking whether log1pl exists and is declared... yes
> checking whether log2 exists and is declared... yes
> checking whether log10 exists and is declared... yes
> checking whether nearbyint exists and is declared... yes
> checking whether nearbyintl exists and is declared... yes
> checking whether powl exists and is declared... yes
> checking whether rintl exists and is declared... yes
> checking whether va_copy exists and is declared... yes
> checking for isblank... yes
> checking sunmath.h usability... no
> checking sunmath.h presence... no
> checking for sunmath.h... no
> checking for cospi in -lsunmath... no
> checking for atanpi... no
> checking for atan2pi... no
> checking for cospi... no
> checking for exp10... yes
> checking for pown... no
> checking for sinpi... no
> checking for tanpi... no
> checking for __cospi... no
> checking for __sinpi... no
> checking for __tanpi... no
> checking for fseeko... yes
> checking for ftello... yes
> checking for matherr... no
> checking whether fcntl exists and is declared... yes
> checking whether getgrgid exists and is declared... yes
> checking whether getpwuid exists and is declared... yes
> checking whether kill exists and is declared... yes
> checking whether sigaction exists and is declared... yes
> checking whether sigaltstack exists and is declared... yes
> checking whether sigemptyset exists and is declared... yes
> checking whether fdopen exists and is declared... yes
> checking whether popen exists and is declared... yes
> checking whether getline exists and is declared... yes
> checking whether select exists and is declared... yes
> checking whether setenv exists and is declared... yes
> checking whether unsetenv exists and is declared... yes
> checking whether getrlimit exists and is declared... yes
> checking whether setrlimit exists and is declared... yes
> checking whether getrusage exists and is declared... yes
> checking whether getpriority exists and is declared... yes
> checking whether chmod exists and is declared... yes
> checking whether mkfifo exists and is declared... yes
> checking whether stat exists and is declared... yes
> checking whether umask exists and is declared... yes
> checking whether gettimeofday exists and is declared... yes
> checking whether utimes exists and is declared... yes
> checking whether times exists and is declared... yes
> checking whether gmtime_r exists and is declared... yes
> checking whether localtime_r exists and is declared... yes
> checking whether nl_langinfo exists and is declared... yes
> checking whether access exists and is declared... yes
> checking whether chdir exists and is declared... yes
> checking whether execv exists and is declared... yes
> checking whether ftruncate exists and is declared... yes
> checking whether getcwd exists and is declared... yes
> checking whether geteuid exists and is declared... yes
> checking whether getuid exists and is declared... yes
> checking whether link exists and is declared... yes
> checking whether readlink exists and is declared... yes
> checking whether symlink exists and is declared... yes
> checking whether sysconf exists and is declared... yes
> checking whether sched_setaffinity exists and is declared... yes
> checking whether sched_getaffinity exists and is declared... yes
> checking whether utime exists and is declared... yes
> checking whether utimensat exists and is declared... yes
> checking for clock_gettime in -lrt... yes
> checking whether clock_gettime exists and is declared... yes
> checking whether timespec_get exists and is declared... yes
> checking for putenv... yes
> checking whether putenv is declared... yes
> checking for vasprintf... yes
> checking whether vasprintf is declared... yes
> checking for mempcpy... yes
> checking for realpath... yes
> checking whether realpath is declared... yes
> checking whether glob exists and is declared... yes
> checking for dladdr... yes
> checking for dlsym... yes
> checking whether dladdr is declared... yes
> checking whether dlsym is declared... yes
> checking whether RTLD_DEFAULT is declared... yes
> checking whether RTLD_NEXT is declared... yes
> checking thread.h usability... no
> checking thread.h presence... no
> checking for thread.h... no
> checking whether thr_stksegment exists and is declared... no
> checking for isnan... yes
> checking whether isfinite is declared... yes
> checking whether isnan is declared... yes
> checking whether you have IEEE 754 floating-point arithmetic... yes
> checking whether putenv("FOO") can unset an environment variable... yes
> checking whether putenv("FOO=") can unset an environment variable... no
> checking for nl_langinfo and CODESET... yes
> checking for mkdtemp... yes
> checking for strdup... yes
> checking for strncasecmp... yes
> checking whether mkdtemp is declared... yes
> checking whether strdup is declared... yes
> checking whether strncasecmp is declared... yes
> checking for library containing connect... none required
> checking for library containing gethostbyname... none required
> checking for library containing xdr_string... none required
> checking for working calloc... yes
> checking for working isfinite... yes
> checking for working log1p... yes
> checking whether ftell works correctly on files opened for append... yes
> checking for working sigaction... yes
> checking whether mktime sets errno... no
> checking whether mktime works correctly outside 1902-2037... yes
> checking complex.h usability... yes
> checking complex.h presence... yes
> checking for complex.h... yes
> checking for double complex... yes
> checking whether C99 double complex is supported... yes
> checking whether cabs exists and is declared... yes
> checking whether carg exists and is declared... yes
> checking whether cexp exists and is declared... yes
> checking whether clog exists and is declared... yes
> checking whether csqrt exists and is declared... yes
> checking whether cpow exists and is declared... yes
> checking whether ccos exists and is declared... yes
> checking whether csin exists and is declared... yes
> checking whether ctan exists and is declared... yes
> checking whether cacos exists and is declared... yes
> checking whether casin exists and is declared... yes
> checking whether catan exists and is declared... yes
> checking whether ccosh exists and is declared... yes
> checking whether csinh exists and is declared... yes
> checking whether ctanh exists and is declared... yes
> checking for working ctanh... yes
> checking whether 'struct tm' includes tm_zone... yes
> checking whether 'struct tm' includes tm_gmtoff... yes
> checking for dgemm_ in -L/opt/sage/9.0/local/lib -lopenblas... yes
> checking whether double complex BLAS can be used... yes
> checking whether the BLAS is complete... yes
> checking for dpstrf_... yes
> checking iconv.h usability... yes
> checking iconv.h presence... yes
> checking for iconv.h... yes
> checking for iconv... yes
> checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes
> checking whether iconv accepts "CP1252"... yes
> checking for iconvlist... no
> checking for iconv... yes
> checking for iconv declaration...
> extern size_t iconv (iconv_t cd, char * *inbuf, size_t
> *inbytesleft, char * *outbuf, size_t *outbytesleft);
> checking wchar.h usability... yes
> checking wchar.h presence... yes
> checking for wchar.h... yes
> checking wctype.h usability... yes
> checking wctype.h presence... yes
> checking for wctype.h... yes
> checking whether mbrtowc exists and is declared... yes
> checking whether wcrtomb exists and is declared... yes
> checking whether wcscoll exists and is declared... yes
> checking whether wcsftime exists and is declared... yes
> checking whether wcstod exists and is declared... yes
> checking whether mbstowcs exists and is declared... yes
> checking whether wcstombs exists and is declared... yes
> checking whether wctrans exists and is declared... yes
> checking whether iswblank exists and is declared... yes
> checking whether wctype exists and is declared... yes
> checking whether iswctype exists and is declared... yes
> checking for wctrans_t... yes
> checking for mbstate_t... yes
> checking for ICU... no
> checking for X... disabled
> using X11 ... no
> checking whether pkg-config knows about cairo and pango... no
> checking whether pkg-config knows about cairo... no
> checking for tclConfig.sh... no
> checking for tclConfig.sh in library (sub)directories... no
> checking for tkConfig.sh... no
> checking for tkConfig.sh in library (sub)directories... no
> checking for tcl.h... no
> checking for BSD networking... yes
> checking rpc/types.h usability... yes
> checking rpc/types.h presence... yes
> checking for rpc/types.h... yes
> checking for rpc/xdr.h... yes
> checking for XDR support... yes
> checking for inflateInit2_ in -lz... yes
> checking zlib.h usability... yes
> checking zlib.h presence... yes
> checking for zlib.h... yes
> checking if zlib version >= 1.2.5... yes
> checking whether zlib support suffices... yes
> checking mmap support for zlib... yes
> checking for BZ2_bzlibVersion in -lbz2... yes
> checking bzlib.h usability... yes
> checking bzlib.h presence... yes
> checking for bzlib.h... yes
> checking if bzip2 version >= 1.0.6... yes
> checking whether bzip2 support suffices... yes
> checking for lzma_version_number in -llzma... yes
> checking lzma.h usability... yes
> checking lzma.h presence... yes
> checking for lzma.h... yes
> checking if lzma version >= 5.0.3... yes
> checking for pcre_fullinfo in -lpcre... yes
> checking pcre.h usability... yes
> checking pcre.h presence... yes
> checking for pcre.h... yes
> checking pcre/pcre.h usability... no
> checking pcre/pcre.h presence... no
> checking for pcre/pcre.h... no
> checking if PCRE version >= 8.20, < 10.0 and has UTF-8 support... yes
> checking if PCRE version >= 8.32... yes
> checking whether PCRE support suffices... yes
> checking for pcre2-config... no
> checking for curl-config... /opt/sage/9.0/local/bin/curl-config
> checking libcurl version ... 7.62.0
> checking curl/curl.h usability... yes
> checking curl/curl.h presence... yes
> checking for curl/curl.h... yes
> checking if libcurl is version 7 and >= 7.22.0... yes
> checking if jpeglib version >= 6b... no
> checking if libpng version >= 1.2.7... yes
> checking for png_create_write_struct in -lpng... yes
> checking whether leap seconds are treated according to POSIX... yes
> checking for inline... inline
> checking for sys/time.h... (cached) yes
> checking for stdlib.h... (cached) yes
> checking for unistd.h... (cached) yes
> checking for sys/param.h... (cached) yes
> checking for struct stat.st_atim.tv_nsec... yes
> checking whether struct stat.st_atim is of type struct timespec... yes
> checking for setitimer... yes
> checking for special C compiler options needed for large files... no
> checking for _FILE_OFFSET_BITS value needed for large files... no
> checking for _LARGEFILE_SOURCE value needed for large files... no
> checking whether KERN_USRSTACK sysctl is supported... no
> checking for visible __lib_stack_end... yes
> checking for lpr... lpr
> checking for paperconf... /usr/bin/paperconf
> checking for Fortran flag to compile .f90 files... none
> checking for Fortran flag to compile .f95 files... none
> checking for gfortran option to support OpenMP... (cached) -fopenmp
> checking for recommended packages... yes
> checking whether NLS is requested... yes
>
> Configuring src/extra/intl directory
> checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
> checking whether we are using the GNU C Library 2 or newer... yes
> checking for ranlib... (cached) ranlib
> checking for simple visibility declarations... yes
> checking for stdint.h... yes
> checking for getpagesize... yes
> checking for working mmap... yes
> checking whether integer division by zero raises SIGFPE... yes
> checking for inttypes.h... yes
> checking for unsigned long long int... yes
> checking for inttypes.h... (cached) yes
> checking whether the inttypes.h PRIxNN macros are broken... no
> checking for ld used by gcc... ld -m elf_x86_64
> checking if the linker (ld -m elf_x86_64) is GNU ld... yes
> checking for shared library run path origin... /usr/bin/bash:
> /opt/sage/9.0/local/lib/libtinfo.so.6: no version information available
> (required by /usr/bin/bash)
> done
> checking whether imported symbols can be declared weak... yes
> checking for multithread API to use... none
> checking argz.h usability... yes
> checking argz.h presence... yes
> checking for argz.h... yes
> checking for inttypes.h... (cached) yes
> checking for limits.h... (cached) yes
> checking for unistd.h... (cached) yes
> checking for sys/param.h... (cached) yes
> checking for getcwd... yes
> checking for getegid... yes
> checking for geteuid... yes
> checking for getgid... yes
> checking for getuid... yes
> checking for mempcpy... (cached) yes
> checking for munmap... yes
> checking for stpcpy... yes
> checking for strcasecmp... yes
> checking for strdup... (cached) yes
> checking for strtoul... yes
> checking for tsearch... yes
> checking for argz_count... yes
> checking for argz_stringify... yes
> checking for argz_next... yes
> checking for __fsetlocking... yes
> checking whether feof_unlocked is declared... yes
> checking whether fgets_unlocked is declared... yes
> checking for iconv... (cached) yes
> checking for iconv declaration... (cached)
> extern size_t iconv (iconv_t cd, char * *inbuf, size_t
> *inbytesleft, char * *outbuf, size_t *outbytesleft);
> checking for NL_LOCALE_NAME macro... yes
> checking for bison... no
> checking for long long int... yes
> checking for long double... yes
> checking for wchar_t... yes
> checking for wint_t... yes
> checking for intmax_t... yes
> checking whether printf() supports POSIX/XSI format strings... yes
> checking whether we are using the GNU C Library 2.1 or newer... yes
> checking for stdint.h... (cached) yes
> checking for SIZE_MAX... yes
> checking for stdint.h... (cached) yes
> checking for CFPreferencesCopyAppValue... no
> checking for CFLocaleCopyCurrent... no
> checking for ptrdiff_t... yes
> checking stddef.h usability... yes
> checking stddef.h presence... yes
> checking for stddef.h... yes
> checking for stdlib.h... (cached) yes
> checking for string.h... (cached) yes
> checking for asprintf... yes
> checking for fwprintf... yes
> checking for putenv... (cached) yes
> checking for setenv... yes
> checking for setlocale... yes
> checking for snprintf... yes
> checking for wcslen... yes
> checking whether _snprintf is declared... no
> checking whether _snwprintf is declared... no
> checking whether getc_unlocked is declared... yes
> checking for nl_langinfo and CODESET... (cached) yes
> checking for LC_MESSAGES... yes
> checking for CFPreferencesCopyAppValue... (cached) no
> checking for CFLocaleCopyCurrent... (cached) no
> checking whether included gettext is requested... no
> checking for GNU gettext in libc... yes
> checking whether to use NLS... yes
> checking where the gettext function comes from... libc
> Finished configuring src/extra/intl directory
>
> checking whether OpenMP SIMD reduction is supported... yes
> using as R_SHELL for scripts ... /usr/bin/bash
> configure: creating ./config.status
> /usr/bin/bash: /opt/sage/9.0/local/lib/libtinfo.so.6: no version
> information available (required by /usr/bin/bash)
> config.status: creating Makeconf
> config.status: creating Makefile
> config.status: creating doc/Makefile
> config.status: creating doc/html/Makefile
> config.status: creating doc/manual/Makefile
> config.status: creating etc/Makefile
> config.status: creating etc/Makeconf
> config.status: creating etc/Renviron
> config.status: creating etc/javaconf
> config.status: creating etc/ldpaths
> config.status: creating m4/Makefile
> config.status: creating po/Makefile
> config.status: creating share/Makefile
> config.status: creating src/Makefile
> config.status: creating src/appl/Makefile
> config.status: creating src/extra/Makefile
> config.status: creating src/extra/blas/Makefile
> config.status: creating src/extra/intl/Makefile
> config.status: creating src/extra/tre/Makefile
> config.status: creating src/extra/tzone/Makefile
> config.status: creating src/extra/xdr/Makefile
> config.status: creating src/include/Makefile
> config.status: creating src/include/Rmath.h0
> config.status: creating src/include/R_ext/Makefile
> config.status: creating src/library/Recommended/Makefile
> config.status: creating src/library/Makefile
> config.status: creating src/library/base/DESCRIPTION
> config.status: creating src/library/base/Makefile
> config.status: creating src/library/compiler/DESCRIPTION
> config.status: creating src/library/compiler/Makefile
> config.status: creating src/library/datasets/DESCRIPTION
> config.status: creating src/library/datasets/Makefile
> config.status: creating src/library/graphics/DESCRIPTION
> config.status: creating src/library/graphics/Makefile
> config.status: creating src/library/graphics/src/Makefile
> config.status: creating src/library/grDevices/DESCRIPTION
> config.status: creating src/library/grDevices/Makefile
> config.status: creating src/library/grDevices/src/Makefile
> config.status: creating src/library/grDevices/src/cairo/Makefile
> config.status: creating src/library/grid/DESCRIPTION
> config.status: creating src/library/grid/Makefile
> config.status: creating src/library/grid/src/Makefile
> config.status: creating src/library/methods/DESCRIPTION
> config.status: creating src/library/methods/Makefile
> config.status: creating src/library/methods/src/Makefile
> config.status: creating src/library/parallel/DESCRIPTION
> config.status: creating src/library/parallel/Makefile
> config.status: creating src/library/parallel/src/Makefile
> config.status: creating src/library/profile/Makefile
> config.status: creating src/library/stats/DESCRIPTION
> config.status: creating src/library/stats/Makefile
> config.status: creating src/library/stats/src/Makefile
> config.status: creating src/library/stats4/DESCRIPTION
> config.status: creating src/library/stats4/Makefile
> config.status: creating src/library/splines/DESCRIPTION
> config.status: creating src/library/splines/Makefile
> config.status: creating src/library/splines/src/Makefile
> config.status: creating src/library/tcltk/DESCRIPTION
> config.status: creating src/library/tcltk/Makefile
> config.status: creating src/library/tcltk/src/Makefile
> config.status: creating src/library/tools/DESCRIPTION
> config.status: creating src/library/tools/Makefile
> config.status: creating src/library/tools/src/Makefile
> config.status: creating src/library/translations/DESCRIPTION
> config.status: creating src/library/translations/Makefile
> config.status: creating src/library/utils/DESCRIPTION
> config.status: creating src/library/utils/Makefile
> config.status: creating src/library/utils/src/Makefile
> config.status: creating src/main/Makefile
> config.status: creating src/modules/Makefile
> config.status: creating src/modules/X11/Makefile
> config.status: creating src/modules/internet/Makefile
> config.status: creating src/modules/lapack/Makefile
> config.status: creating src/nmath/Makefile
> config.status: creating src/nmath/standalone/Makefile
> config.status: creating src/scripts/Makefile
> config.status: creating src/scripts/R.sh
> config.status: creating src/scripts/Rcmd
> config.status: creating src/scripts/javareconf
> config.status: creating src/scripts/mkinstalldirs
> config.status: creating src/scripts/pager
> config.status: creating src/scripts/rtags
> config.status: creating src/unix/Makefile
> config.status: creating tests/Makefile
> config.status: creating tests/Embedding/Makefile
> config.status: creating tests/Examples/Makefile
> config.status: creating tools/Makefile
> config.status: creating src/include/config.h
> config.status: executing libtool commands
> config.status: executing stamp-h commands
> configure: WARNING: unrecognized options: --disable-dependency-tracking
>
> R is now configured for x86_64-pc-linux-gnu
>
> Source directory: .
> Installation directory: /opt/sage/9.0/local
>
> C compiler: gcc -g -O2
> Fortran fixed-form compiler: gfortran -fno-optimize-sibling-calls -g -O2
>
> Default C++ compiler: g++ -std=gnu++11 -std=gnu++11 -g -O2
> C++98 compiler: g++ -std=gnu++11 -std=gnu++98 -g -O2
> C++11 compiler: g++ -std=gnu++11 -std=gnu++11 -g -O2
> C++14 compiler: g++ -std=gnu++11 -std=gnu++14 -g -O2
> C++17 compiler: g++ -std=gnu++11 -std=gnu++17 -g -O2
> Fortran free-form compiler: gfortran -fno-optimize-sibling-calls -g -O2
> Obj-C compiler:
>
> Interfaces supported:
> External libraries: readline, BLAS(OpenBLAS),
> LAPACK(generic), curl
> Additional capabilities: PNG, NLS
> Options enabled: shared R library, R profiling
>
> Capabilities skipped: JPEG, TIFF, cairo, ICU
> Options not enabled: shared BLAS, memory profiling
>
> Recommended packages: yes
>
> configure: WARNING: you cannot build info or HTML versions of the R manuals
> configure: WARNING: you cannot build PDF versions of the R manuals
> configure: WARNING: you cannot build PDF versions of vignettes and help
> pages
> Building r-3.6.2.p0
> make[4]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src'
> make[5]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/m4'
> make[5]: Nothing to be done for 'R'.
> make[5]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/m4'
> make[5]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/tools'
> make[5]: Nothing to be done for 'R'.
> make[5]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/tools'
> make[5]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/doc'
> make[6]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/doc/html'
> make[6]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/doc/html'
> make[6]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/doc/manual'
> make[6]: Nothing to be done for 'R'.
> make[6]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/doc/manual'
> make[5]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/doc'
> make[5]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/etc'
> make[5]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/etc'
> make[5]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/share'
> make[5]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/share'
> make[5]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src'
> make[6]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/scripts'
> creating src/scripts/R.fe
> make[7]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/scripts'
> mkdir -p -- ../../bin
> make[7]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/scripts'
> make[6]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/scripts'
> make[6]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/include'
> mkdir -p -- ../../include
> make[7]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/include/R_ext'
> mkdir -p -- ../../../include/R_ext
> make[7]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/include/R_ext'
> make[6]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/include'
> make[6]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/extra'
> make[7]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/extra/tre'
> make[8]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/extra/tre'
> making regcomp.d from regcomp.c
> making regerror.d from regerror.c
> making regexec.d from regexec.c
> making tre-ast.d from tre-ast.c
> making tre-compile.d from tre-compile.c
> making tre-match-approx.d from tre-match-approx.c
> making tre-match-backtrack.d from tre-match-backtrack.c
> making tre-match-parallel.d from tre-match-parallel.c
> making tre-mem.d from tre-mem.c
> making tre-parse.d from tre-parse.c
> making tre-stack.d from tre-stack.c
> making xmalloc.d from xmalloc.c
> make[8]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/extra/tre'
> make[8]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/extra/tre'
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> regcomp.c -o regcomp.o
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> regerror.c -o regerror.o
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> regexec.c -o regexec.o
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> tre-ast.c -o tre-ast.o
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> tre-compile.c -o tre-compile.o
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> tre-match-approx.c -o tre-match-approx.o
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> tre-match-backtrack.c -o tre-match-backtrack.o
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> tre-match-parallel.c -o tre-match-parallel.o
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> tre-mem.c -o tre-mem.o
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> tre-parse.c -o tre-parse.o
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> tre-stack.c -o tre-stack.o
> gcc -I. -I. -I../../../src/include -I../../../src/include
> -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c
> xmalloc.c -o xmalloc.o
> ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o
> tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o
> tre-parse.o tre-stack.o xmalloc.o
> ranlib libtre.a
> make[8]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/extra/tre'
> make[7]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/extra/tre'
> make[6]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/extra'
> make[6]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/appl'
> making integrate.d from integrate.c
> making interv.d from interv.c
> making maxcol.d from maxcol.c
> making optim.d from optim.c
> making pretty.d from pretty.c
> making uncmin.d from uncmin.c
> make[7]: Entering directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/appl'
> gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H
> -fopenmp -fpic -g -O2 -c integrate.c -o integrate.o
> In file included from ../../src/include/R_ext/Applic.h:41,
> from integrate.c:33:
> ../../src/include/R_ext/BLAS.h:103:55: error: expected declaration
> specifiers or '...' before ')' token
> 103 | const double *beta, double *y, const int *incy FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:110:35: error: expected declaration
> specifiers or '...' before ')' token
> 110 | double *y, const int *incy FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:117:55: error: expected declaration
> specifiers or '...' before ')' token
> 117 | const double *beta, double *y, const int *incy FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:124:55: error: expected declaration
> specifiers or '...' before ')' token
> 124 | const double *beta, double *y, const int *incy FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:132:55: error: expected declaration
> specifiers or '...' before ')' token
> 132 | const double *beta, double *y, const int *incy FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:139:36: note: in expansion of macro 'FCLEN'
> 139 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:139:42: note: in expansion of macro 'FCLEN'
> 139 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:139:47: error: expected declaration
> specifiers or '...' before ')' token
> 139 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:145:36: note: in expansion of macro 'FCLEN'
> 145 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:145:42: note: in expansion of macro 'FCLEN'
> 145 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:145:47: error: expected declaration
> specifiers or '...' before ')' token
> 145 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:151:36: note: in expansion of macro 'FCLEN'
> 151 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:151:42: note: in expansion of macro 'FCLEN'
> 151 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:151:47: error: expected declaration
> specifiers or '...' before ')' token
> 151 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:158:36: note: in expansion of macro 'FCLEN'
> 158 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:158:42: note: in expansion of macro 'FCLEN'
> 158 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:158:47: error: expected declaration
> specifiers or '...' before ')' token
> 158 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:165:9: note: in expansion of macro 'FCLEN'
> 165 | FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:165:15: note: in expansion of macro 'FCLEN'
> 165 | FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:165:20: error: expected declaration
> specifiers or '...' before ')' token
> 165 | FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:172:36: note: in expansion of macro 'FCLEN'
> 172 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:172:42: note: in expansion of macro 'FCLEN'
> 172 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:172:47: error: expected declaration
> specifiers or '...' before ')' token
> 172 | double *x, const int *incx FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:183:40: error: expected declaration
> specifiers or '...' before ')' token
> 183 | double *a, const int *lda FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:187:59: error: expected declaration
> specifiers or '...' before ')' token
> 187 | const double *x, const int *incx, double *ap FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:194:34: error: expected declaration
> specifiers or '...' before ')' token
> 194 | double *a, const int *lda FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:200:53: error: expected declaration
> specifiers or '...' before ')' token
> 200 | const double *y, const int *incy, double *ap FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:212:9: note: in expansion of macro 'FCLEN'
> 212 | FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:212:14: error: expected declaration
> specifiers or '...' before ')' token
> 212 | FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:221:9: note: in expansion of macro 'FCLEN'
> 221 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:221:15: note: in expansion of macro 'FCLEN'
> 221 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:221:21: note: in expansion of macro 'FCLEN'
> 221 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:221:26: error: expected declaration
> specifiers or '...' before ')' token
> 221 | FCLEN FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:229:9: note: in expansion of macro 'FCLEN'
> 229 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:229:15: note: in expansion of macro 'FCLEN'
> 229 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:229:21: note: in expansion of macro 'FCLEN'
> 229 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:229:26: error: expected declaration
> specifiers or '...' before ')' token
> 229 | FCLEN FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:238:9: note: in expansion of macro 'FCLEN'
> 238 | FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:238:14: error: expected declaration
> specifiers or '...' before ')' token
> 238 | FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:246:9: note: in expansion of macro 'FCLEN'
> 246 | FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:246:14: error: expected declaration
> specifiers or '...' before ')' token
> 246 | FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:256:10: note: in expansion of macro 'FCLEN'
> 256 | FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:256:15: error: expected declaration
> specifiers or '...' before ')' token
> 256 | FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:304:22: error: expected declaration
> specifiers or '...' before ')' token
> 304 | int *incy FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:311:13: note: in expansion of macro 'FCLEN'
> 311 | FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:311:18: error: expected declaration
> specifiers or '...' before ')' token
> 311 | FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:316:41: error: expected declaration
> specifiers or '...' before ')' token
> 316 | Rcomplex *y, const int *incy FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:329:41: error: expected declaration
> specifiers or '...' before ')' token
> 329 | Rcomplex *y, const int *incy FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:335:13: note: in expansion of macro 'FCLEN'
> 335 | FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:335:18: error: expected declaration
> specifiers or '...' before ')' token
> 335 | FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:340:41: error: expected declaration
> specifiers or '...' before ')' token
> 340 | Rcomplex *y, const int *incy FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:344:26: error: expected declaration
> specifiers or '...' before ')' token
> 344 | const int *lda FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:348:57: error: expected declaration
> specifiers or '...' before ')' token
> 348 | const int *incy, Rcomplex *a, const int *lda FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:354:14: note: in expansion of macro 'FCLEN'
> 354 | FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:354:19: error: expected declaration
> specifiers or '...' before ')' token
> 354 | FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:359:28: note: in expansion of macro 'FCLEN'
> 359 | const int *ldc FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:359:33: error: expected declaration
> specifiers or '...' before ')' token
> 359 | const int *ldc FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:364:12: error: expected declaration
> specifiers or '...' before ')' token
> 364 | FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:368:11: error: expected declaration
> specifiers or '...' before ')' token
> 368 | FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:372:42: error: expected declaration
> specifiers or '...' before ')' token
> 372 | const int *incy, Rcomplex *ap FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:387:13: note: in expansion of macro 'FCLEN'
> 387 | FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:387:18: error: expected declaration
> specifiers or '...' before ')' token
> 387 | FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:392:14: note: in expansion of macro 'FCLEN'
> 392 | FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:392:19: error: expected declaration
> specifiers or '...' before ')' token
> 392 | FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:397:28: note: in expansion of macro 'FCLEN'
> 397 | const int *ldc FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:397:33: error: expected declaration
> specifiers or '...' before ')' token
> 397 | const int *ldc FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:402:13: note: in expansion of macro 'FCLEN'
> 402 | FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:402:19: note: in expansion of macro 'FCLEN'
> 402 | FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:402:24: error: expected declaration
> specifiers or '...' before ')' token
> 402 | FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:407:13: note: in expansion of macro 'FCLEN'
> 407 | FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:407:19: note: in expansion of macro 'FCLEN'
> 407 | FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:407:24: error: expected declaration
> specifiers or '...' before ')' token
> 407 | FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:411:29: note: in expansion of macro 'FCLEN'
> 411 | const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:411:35: note: in expansion of macro 'FCLEN'
> 411 | const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:411:40: error: expected declaration
> specifiers or '...' before ')' token
> 411 | const int *incx FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:415:29: note: in expansion of macro 'FCLEN'
> 415 | const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:415:35: note: in expansion of macro 'FCLEN'
> 415 | const int *incx FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:415:40: error: expected declaration
> specifiers or '...' before ')' token
> 415 | const int *incx FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:421:13: note: in expansion of macro 'FCLEN'
> 421 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:421:19: note: in expansion of macro 'FCLEN'
> 421 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:421:25: note: in expansion of macro 'FCLEN'
> 421 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:421:30: error: expected declaration
> specifiers or '...' before ')' token
> 421 | FCLEN FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:426:13: note: in expansion of macro 'FCLEN'
> 426 | FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:426:19: note: in expansion of macro 'FCLEN'
> 426 | FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:426:24: error: expected declaration
> specifiers or '...' before ')' token
> 426 | FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:431:13: note: in expansion of macro 'FCLEN'
> 431 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:431:19: note: in expansion of macro 'FCLEN'
> 431 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:431:25: note: in expansion of macro 'FCLEN'
> 431 | FCLEN FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:431:30: error: expected declaration
> specifiers or '...' before ')' token
> 431 | FCLEN FCLEN FCLEN FCLEN);
> | ^
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:436:13: note: in expansion of macro 'FCLEN'
> 436 | FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:43:16: error: expected declaration
> specifiers or '...' before ',' token
> 43 | # define FCLEN ,FC_LEN_T
> | ^
> ../../src/include/R_ext/BLAS.h:436:19: note: in expansion of macro 'FCLEN'
> 436 | FCLEN FCLEN FCLEN);
> | ^~~~~
> ../../src/include/R_ext/BLAS.h:436:24: error: expected declaration
> specifiers or '...' before ')' token
> 436 | FCLEN FCLEN FCLEN);
> | ^
> make[7]: *** [../../Makeconf:124: integrate.o] Error 1
> make[7]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/appl'
> make[6]: *** [Makefile:47: R] Error 2
> make[6]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src/appl'
> make[5]: *** [Makefile:28: R] Error 1
> make[5]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src/src'
> make[4]: *** [Makefile:61: R] Error 1
> make[4]: Leaving directory
> '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0/src'
> ********************************************************************************
> Error building r-3.6.2.p0
> ********************************************************************************
>
> real 0m45.006s
> user 0m27.439s
> sys 0m9.075s
> ************************************************************************
> Error installing package r-3.6.2.p0
> ************************************************************************
> Please email sage-devel (http://groups.google.com/group/sage-devel)
> explaining the problem and including the log file
> /opt/sage/9.0/logs/pkgs/r-3.6.2.p0.log
> Describe your computer, operating system, etc.
> If you want to try to fix the problem yourself, *don't* just cd to
> /opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0 and type 'make' or
> whatever is appropriate.
> Instead, the following commands setup all environment variables
> correctly and load a subshell for you to debug the error:
> (cd '/opt/sage/9.0/local/var/tmp/sage/build/r-3.6.2.p0' &&
> '/opt/sage/9.0/sage' --sh)
> When you are done debugging, you can type "exit" to leave the subshell.
> ************************************************************************
>
>
> --
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