With OS X 11.1, I am unable to build Sage at all. With 9.3.beta5 as well as
earlier releases, cffi fails:
Installing cffi-1.14.3
Traceback (most recent call last):
File
"/Users/palmieri/Desktop/Sage/sage_builds/TESTING/sage-9.3.beta5/local/var/tmp/sage/build/cffi-1.14.3/src/setup.py",
line 152, in <module>
if 'darwin' in sys.platform and macosx_deployment_target() >= (10, 15):
File
"/Users/palmieri/Desktop/Sage/sage_builds/TESTING/sage-9.3.beta5/local/var/tmp/sage/build/cffi-1.14.3/src/setup.py",
line 76, in macosx_deployment_target
return tuple(map(int,
get_config_var("MACOSX_DEPLOYMENT_TARGET").split('.')))
AttributeError: 'int' object has no attribute 'split'
Error: could not determine package name
numpy fails with a similar error. If I patch both to handle this (by
calling 'str', as in 'str(get_config_var(...))'), then scipy fails with an
error that I don't know how to fix, as reported at
https://trac.sagemath.org/ticket/30651.
On Monday, December 28, 2020 at 11:10:36 AM UTC-8 John H Palmieri wrote:
> I've been having problems with computers running Mac OS for several Sage
> releases now. With OS X 10.15.7 and a pretty full homebrew installation,
> cypari fails:
>
> cypari2/gen.c:23742:70: error: too many arguments to function call,
> expected 3, have 4
> __pyx_v__ret = asympnum0(__pyx_v__expr, __pyx_v_k, __pyx_v__alpha,
> __pyx_v_precision);
> ~~~~~~~~~
> ^~~~~~~~~~~~~~~~~
> /usr/local/include/pari/paripriv.h:101:1: note: 'asympnum0' declared here
> GEN asympnum0(GEN u, GEN alpha, long prec);
> ^
> cypari2/gen.c:28023:18: error: implicit declaration of function
> 'bnfcompress' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
> __pyx_v__ret = bnfcompress(__pyx_v__bnf);
> ^
> cypari2/gen.c:28023:16: warning: incompatible integer to pointer
> conversion assigning to 'GEN' (aka 'long *') from 'int' [-Wint-conversion]
> __pyx_v__ret = bnfcompress(__pyx_v__bnf);
> ^ ~~~~~~~~~~~~~~~~~~~~~~~~~
> cypari2/gen.c:79145:52: error: too few arguments to function call,
> expected 3, have 2
> __pyx_v__ret = lfuntwist(__pyx_v__L, __pyx_v__chi);
> ~~~~~~~~~ ^
> /usr/local/include/pari/paridecl.h:4164:1: note: 'lfuntwist' declared
> here
> GEN lfuntwist(GEN ldata1, GEN ldata2, long bitprec);
> ^
> cypari2/gen.c:80115:70: error: too many arguments to function call,
> expected 3, have 4
> __pyx_v__ret = limitnum0(__pyx_v__expr, __pyx_v_k, __pyx_v__alpha,
> __pyx_v_precision);
> ~~~~~~~~~
> ^~~~~~~~~~~~~~~~~
> /usr/local/include/pari/paripriv.h:125:1: note: 'limitnum0' declared here
> GEN limitnum0(GEN u, GEN alpha, long prec);
> ^
> cypari2/gen.c:101823:18: error: implicit declaration of function
> 'nfbasis_gp' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
> __pyx_v__ret = nfbasis_gp(__pyx_v__T);
> ^
> cypari2/gen.c:101823:18: note: did you mean 'nfbasis'?
> /usr/local/include/pari/paridecl.h:2231:9: note: 'nfbasis' declared here
> GEN nfbasis(GEN x, GEN *y);
> ^
> cypari2/gen.c:101823:16: warning: incompatible integer to pointer
> conversion assigning to 'GEN' (aka 'long *') from 'int' [-Wint-conversion]
> __pyx_v__ret = nfbasis_gp(__pyx_v__T);
> ^ ~~~~~~~~~~~~~~~~~~~~~~
> cypari2/gen.c:112854:16: warning: incompatible pointer to integer
> conversion assigning to 'long' from 'GEN' (aka 'long *'); dereference with
> * [-Wint-conversion]
> __pyx_v__ret = permorder(__pyx_v__x);
> ^ ~~~~~~~~~~~~~~~~~~~~~
> *
> cypari2/gen.c:116073:18: error: implicit declaration of function
> 'isirreducible' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
> __pyx_v__ret = isirreducible(__pyx_v__pol);
> ^
> cypari2/gen.c:116073:18: note: did you mean 'polisirreducible'?
> /usr/local/include/pari/paridecl.h:4812:9: note: 'polisirreducible'
> declared here
> long polisirreducible(GEN x);
> ^
> cypari2/gen.c:124325:49: error: too few arguments to function call,
> expected 3, have 2
> __pyx_v__ret = qfbsolve(__pyx_v__Q, __pyx_v__p);
> ~~~~~~~~ ^
> /usr/local/include/pari/paridecl.h:1880:1: note: 'qfbsolve' declared here
> GEN qfbsolve(GEN Q, GEN n, long flag);
> ^
> cypari2/gen.c:134243:69: error: too many arguments to function call,
> expected 3, have 4
> __pyx_v__ret = rnfkummer(__pyx_v__bnr, __pyx_v__subgp, __pyx_v_d,
> __pyx_v_precision);
> ~~~~~~~~~
> ^~~~~~~~~~~~~~~~~
> /usr/local/include/pari/paridecl.h:4110:1: note: 'rnfkummer' declared
> here
> GEN rnfkummer(GEN bnr, GEN subgroup, long prec);
> ^
> cypari2/gen.c:145599:18: error: implicit declaration of function
> 'zetamult0' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
> __pyx_v__ret = zetamult0(__pyx_v__s, __pyx_v__T, __pyx_v_precision);
> ^
> cypari2/gen.c:145599:18: note: did you mean 'zetamult'?
> /usr/local/include/pari/paridecl.h:5345:9: note: 'zetamult' declared here
> GEN zetamult(GEN avec, long prec);
> ^
> cypari2/gen.c:145599:16: warning: incompatible integer to pointer
> conversion assigning to 'GEN' (aka 'long *') from 'int' [-Wint-conversion]
> __pyx_v__ret = zetamult0(__pyx_v__s, __pyx_v__T, __pyx_v_precision);
> ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> cypari2/gen.c:167603:15: error: implicit declaration of function
> 'isirreducible' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
> __pyx_v_t = isirreducible(__pyx_v_self->__pyx_base.g);
> ^
> 4 warnings and 10 errors generated.
> error: command '/usr/bin/gcc' failed with exit code 1
>
>
> If I use `./configure --with-system-python3=no`, then the build succeeds
> but I get a bunch of doctest failures, I think all of the form
>
> File "src/sage/misc/sagedoc.py", line 646, in sage.misc.sagedoc.format
> Failed example:
> cython('\n'.join(cython_code))
> Expected nothing
> Got:
> ld: warning: dylib (/usr/local/lib/libmpfr.dylib) was built for newer
> macOS version (10.15) than being linked (10.9)
> ld: warning: dylib (/usr/local/lib/libgmp.dylib) was built for newer
> macOS version (10.15) than being linked (10.9)
> ld: warning: dylib (/usr/local/lib/libgmpxx.dylib) was built for newer
> macOS version (10.15) than being linked (10.9)
> ld: warning: dylib (/usr/local/lib/libgsl.dylib) was built for newer
> macOS version (10.15) than being linked (10.9)
>
>
>
> On Monday, December 28, 2020 at 10:00:15 AM UTC-8 Kenji Iohara wrote:
>
>> On mac OS10.15.7, MAKE PTESTLONG passed without problem.
>>
>> 28/12/2020 15:07、Kenji Iohara <[email protected]>のメール:
>>
>>
>> I have compiled from the first built on my Mac with OS 10.15.7 which
>> worked perfectly and on OS 11.1 it stopped with the problem on Cython…
>>
>>
>> 28/12/2020 15:05、Dima Pasechnik <[email protected]>のメール:
>>
>> it seems you have a conflicting install of fplll in /usr/local
>>
>> On Mon, 28 Dec 2020, 11:54 David Coudert, <[email protected]> wrote:
>>
>>> Hello,
>>>
>>> On macOS 10.15.7 and fedora 32, I have an error compiling fpylll-0.5.4.
>>> See attached log file.
>>>
>>> This is apparently non blocking to finalize the compilation of
>>> 9.3.beta5. I can run it.
>>>
>>> Best wishes,
>>> David.
>>>
>>>
>>> --
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>>>
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>>> .
>>>
>>> Le 28 déc. 2020 à 01:11, Volker Braun <[email protected]> a écrit :
>>>
>>> As always, you can get the latest beta version from the "develop" git
>>> branch. Alternatively, the self-contained source tarball is at
>>> http://www.sagemath.org/download-latest.html
>>>
>>>
>>> 9d686f22f4 (trac/develop, tag: 9.3.beta5) Updated SageMath version to
>>> 9.3.beta5
>>> 0c355ddc52 Trac #31106: refresh combinat.py
>>> 951ab8ca9f Trac #31096: some flake8 cleanup in abvar/
>>> 871b530c62 Trac #30979: Remove duplication of options handled in
>>> src/bin/sage and build/bin/sage-site
>>> 86310bfbfe Trac #31095: tox.ini, GH Actions: Remove ubuntu-eoan
>>> 57f462dd34 Trac #31001: Some bugs concerning the trivial knot diagram
>>> 0e64d005b6 Trac #28746: Developer's Guide: Add instructions for sagelib
>>> development in a conda environment
>>> 789604ecea Trac #27122: Compile with -march=native
>>> 6e0f7d9b48 Trac #31082: Upgrade: OpenSSL 1.1.1i
>>> 0d79fd60d4 Trac #31025: FPLLL 5.4.0 and FPyLLL 0.5.4
>>> 89351e77c6 Trac #31034: Fix sage -package download --allow-upstream, add
>>> option --on-error=warn, add filtering to sage -package upload
>>> 76840e0962 Trac #31089: detect_poles puts a gap in function plots (even
>>> if there are no poles)
>>> 709603316c Trac #31073: typos in graphs, matroids, logic
>>> 3e26b6bc58 Trac #31072: Allow conversion of Sequence into function fields
>>> 6fa14926ed Trac #31068: some typos in rings/ and schemes/
>>> 6384225e3b Trac #31067: another bunch of typos
>>> 372959f4c2 Trac #31066: a few typos
>>> 17b176f183 Trac #31060: some details in fraction field of Fp[T]
>>> 93e2f09871 Trac #30964: partial flake8 cleanup for repl/
>>> 33e237fe60 Trac #31085: fix conversion of sign function to fricas
>>> e5425a6253 Trac #31081: get rid of _multiply
>>> 2336f9b254 Trac #31080: Replace startup exception by warning
>>> 08e430229a Trac #31079: refresh Symmetric Group representations
>>> 32c4f04ac9 Trac #31070: add some type hints in parking functions
>>> e63f65cef0 Trac #31063: Fix a test failure with readline 8.1
>>> f455241f5a Trac #31061: Upgrade: GLPK 5.0
>>> 792340f539 Trac #31059: refresh dirichlet.py
>>> 4766dfe650 Trac #31057: more cleanup in pbori
>>> e310f55ae1 Trac #31056: Guard against an empty SAGE_LOCAL
>>> 1608ba96f2 Trac #31051: Fix gp2c spkg-configure to let configure succeed
>>> on Fedora 32
>>> fdcb0a1160 Trac #30993: add pre processing for treewidth
>>> 557ba32733 Trac #30971: Update to pillow 8.0.1
>>> 3d9a1babd9 Trac #30901: sage.env._get_shared_lib_filename: Fix for
>>> MULTIARCH
>>> 0a08e12aa5 Trac #30750: Implementation of semistandard tableaux as
>>> pathtableaux
>>> c3643ef633 Trac #30356: Graphs: grouped sporadic distance-regular graphs
>>> in a function
>>> 8d4d3f3d90 Trac #30343: Graphs: point-graph of generalised polygons
>>> 44b6d7584b Trac #30199: Prime degree isogeny (di)graphs of elliptic
>>> curves
>>> c073c753ba Trac #29973: Make sets doctests ready for random seeds
>>> e50d12df76 Trac #29853: Do not go through Python for gf2e dense matrices
>>> in word_to_poly
>>> ac908e83e8 Trac #29364: Bug in S-class groups of number fields
>>> f1ccdc0505 Trac #29031: Actions cannot be pickled
>>> 81aebb9649 Trac #11590: Integrating the sgn() function can produce
>>> incorrect results
>>> df2adf8c67 Trac #31058: src/bin/sage-venv-config: Do not fail if
>>> sage_conf is not available
>>> 7388d57159 Trac #30764: Adapt to float factorial deprecation in Python
>>> 3.9
>>> e8fe2ecb32 Trac #31042: build/pkgs/_recommended: Remove duplication of
>>> the pandoc system package in debian, homebrew
>>> 3460a4ac4a Trac #31039: refresh the Knutson-Tao puzzles file
>>> 4d8bd8aef0 Trac #31028: flake8 for two files in modular/hecke
>>> b235baa8f3 Trac #30989: add some typing information to interval-posets
>>> 38fabbc781 Trac #30870: Add path_tableaux/frieze module to documentation
>>> d2edce9ab4 Trac #31038: Improve the zonotope construction
>>> 389a88783c Trac #31050: Upgrade wheel
>>> c4a802d2b6 (tag: 9.3.beta4) Updated SageMath version to 9.3.beta4
>>>
>>>
>>> --
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>>> .
>>>
>>>
>>>
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>>>
>>
>> --
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>>
>> <https://groups.google.com/d/msgid/sage-release/CAAWYfq3Vwfk_g3XZVPd%2B5DB6PPPhxEseJf1A7gvoQ2jac5sTWg%40mail.gmail.com?utm_medium=email&utm_source=footer>
>> .
>>
>>
>>
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