on macOS, I'm also running Python 3.12 and it's working well (see below).
How can I extract data to see where the tests time out ?
Thanks,
David.
MAC-04017247:sage dcoudert$ ./sage -t src/sage/graphs/generators/
Running doctests with ID 2024-05-03-11-03-11-89a06eef.
Git branch: develop
Git ref: 10.4.beta3-802-g744939e037
Running with SAGE_LOCAL='/Users/dcoudert/sage/local' and
SAGE_VENV='/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12'
Using
--optional=benzene,bliss,buckygen,csdp,dot2tex,gap_packages,glucose,homebrew,igraph,libsemigroups,mcqd,pip,plantri,python_igraph,sage,sage_spkg,tdlib,texttable
Features to be detected:
4ti2,SAGE_SRC,benzene,bliss,buckygen,conway_polynomials,csdp,cvxopt,cvxopt,database_cremona_ellcurve,database_cremona_mini_ellcurve,database_cubic_hecke,database_ellcurves,database_graphs,database_jones_numfield,database_knotinfo,dvipng,ecm,fpylll,fricas,gap_package_atlasrep,gap_package_design,gap_package_grape,gap_package_guava,gap_package_hap,gap_package_polycyclic,gap_package_qpa,gap_package_quagroup,gfan,graphviz,imagemagick,ipython,jmol,jupymake,kenzo,latte_int,lrcalc_python,lrslib,matroid_database,mcqd,meataxe,mpmath,msolve,nauty,networkx,numpy,palp,pandoc,pdf2svg,pdftocairo,pexpect,phitigra,pillow,plantri,polytopes_db,polytopes_db_4d,pplpy,primecountpy,ptyprocess,pynormaliz,pyparsing,python_igraph,requests,rubiks,sage.combinat,sage.geometry.polyhedron,sage.graphs,sage.groups,sage.libs.braiding,sage.libs.ecl,sage.libs.flint,sage.libs.gap,sage.libs.linbox,sage.libs.m4ri,sage.libs.ntl,sage.libs.pari,sage.libs.singular,sage.misc.cython,sage.modular,sage.modules,sage.numerical.mip,sage.plot,sage.rings.complex_double,sage.rings.finite_rings,sage.rings.function_field,sage.rings.number_field,sage.rings.padics,sage.rings.polynomial.pbori,sage.rings.real_double,sage.rings.real_mpfr,sage.sat,sage.schemes,sage.symbolic,sage_numerical_backends_coin,sagemath_doc_html,scipy,singular,sphinx,symengine_py,sympy,tdlib,threejs
Doctesting 12 files.
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/degree_sequence.py
[17 tests, 3.72 s]
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/distance_regular.pyx
[181 tests, 14.73 s]
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/smallgraphs.py
[510 tests, 12.77 s]
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/families.py
[449 tests, 9.25 s]
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/all.py
[0 tests, 0.00 s]
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/random.py
[217 tests, 7.83 s]
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/chessboard.py
[42 tests, 0.30 s]
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/basic.py
[171 tests, 4.28 s]
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/platonic_solids.py
[34 tests, 3.40 s]
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/intersection.py
[72 tests, 1.27 s]
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/classical_geometries.py
[144 tests, 3.83 s]
sage -t --warn-long 22.9
--random-seed=239687165614427705433447704824745784831
src/sage/graphs/generators/world_map.py
[20 tests, 0.08 s]
----------------------------------------------------------------------
All tests passed!
----------------------------------------------------------------------
Total time for all tests: 79.3 seconds
cpu time: 24.5 seconds
cumulative wall time: 61.5 seconds
Features detected for doctesting:
gap_package_atlasrep,gap_package_design,gap_package_grape,networkx,numpy,sage.combinat,sage.geometry.polyhedron,sage.groups,sage.libs.flint,sage.libs.gap,sage.libs.pari,sage.modules,sage.numerical.mip,sage.plot,sage.rings.finite_rings,sage.rings.number_field,sage.schemes,sage.symbolic,scipy
pytest is not installed in the venv, skip checking tests that rely on it
On Friday, May 3, 2024 at 3:25:41 PM UTC+2 Dima Pasechnik wrote:
> On Fri, May 03, 2024 at 05:47:27AM -0700, [email protected] wrote:
> > Thank you for this new release.
> >
> > With Fedora 39, I have the following issue that I don't observe on macOS
> >
> > maserati:/some/path/sage> ./sage -t
> > src/sage/graphs/generators/smallgraphs.py
> >
> > too few successful tests, not using stored timings
> >
> > Running doctests with ID 2024-05-03-12-10-24-1c65d6ef.
> >
> > Git branch: develop
> >
> > Git ref: 10.4.beta5
> >
> > Running with SAGE_LOCAL='/home/dcoudert/sage/local' and
> > SAGE_VENV='/home/dcoudert/sage/local/var/lib/sage/venv-python3.12'
> >
> > Using
> >
> --optional=benzene,bliss,buckygen,csdp,dot2tex,fedora,gap_packages,glucose,igraph,libsemigroups,mcqd,pip,plantri,python_igraph,sage,sage_spkg,tdlib,texttable
> >
> > Features to be detected:
> >
> 4ti2,SAGE_SRC,benzene,bliss,buckygen,conway_polynomials,csdp,cvxopt,cvxopt,database_cremona_ellcurve,database_cremona_mini_ellcurve,database_cubic_hecke,database_ellcurves,database_graphs,database_jones_numfield,database_knotinfo,dvipng,ecm,fpylll,fricas,gap_package_atlasrep,gap_package_design,gap_package_grape,gap_package_guava,gap_package_hap,gap_package_polycyclic,gap_package_qpa,gap_package_quagroup,gfan,graphviz,imagemagick,ipython,jmol,jupymake,kenzo,latte_int,lrcalc_python,lrslib,matroid_database,mcqd,meataxe,mpmath,msolve,nauty,networkx,numpy,palp,pandoc,pdf2svg,pdftocairo,pexpect,phitigra,pillow,plantri,polytopes_db,polytopes_db_4d,pplpy,primecountpy,ptyprocess,pynormaliz,pyparsing,python_igraph,requests,rubiks,sage.combinat,sage.geometry.polyhedron,sage.graphs,sage.groups,sage.libs.braiding,sage.libs.ecl,sage.libs.flint,sage.libs.gap,sage.libs.linbox,sage.libs.m4ri,sage.libs.ntl,sage.libs.pari,sage.libs.singular,sage.misc.cython,sage.modular,sage.modules,sage.numerical.mip,sage.plot,sage.rings.complex_double,sage.rings.finite_rings,sage.rings.function_field,sage.rings.number_field,sage.rings.padics,sage.rings.polynomial.pbori,sage.rings.real_double,sage.rings.real_mpfr,sage.sat,sage.schemes,sage.symbolic,sage_numerical_backends_coin,sagemath_doc_html,scipy,singular,sphinx,symengine_py,sympy,tdlib,threejs
> >
> > Doctesting 1 file.
> >
> > sage -t --random-seed=97244284769564606085961768045450911646
> > src/sage/graphs/generators/smallgraphs.py
> >
> > Timed out (and interrupt failed)
> >
> > **********************************************************************
> >
> >
> > ----------------------------------------------------------------------
> >
> > sage -t --random-seed=97244284769564606085961768045450911646
> > src/sage/graphs/generators/smallgraphs.py # Timed out (and interrupt
> > failed)
> >
> > ----------------------------------------------------------------------
> >
> > Total time for all tests: 660.1 seconds
> >
> > cpu time: 0.0 seconds
> >
> > cumulative wall time: 0.0 seconds
> >
> > Features detected for doctesting:
> >
> networkx,sage.geometry.polyhedron,sage.groups,sage.libs.pari,sage.modules,sage.numerical.mip,sage.plot,sage.rings.finite_rings,sage.rings.number_field,sage.symbolic
> >
> > pytest is not installed in the venv, skip checking tests that rely on it
> >
> >
> > Same issue with
> >
> > sage -t --random-seed=76417292471192601569274824800602906818
> > src/sage/graphs/strongly_regular_db.pyx # Timed out (and interrupt
> failed)
> >
> > sage -t --random-seed=76417292471192601569274824800602906818
> > src/sage/graphs/generators/classical_geometries.py # Timed out (and
> > interrupt failed)
> >
> > sage -t --random-seed=76417292471192601569274824800602906818
> > src/sage/graphs/generators/distance_regular.pyx # Timed out (and
> interrupt
> > failed)
> >
> > sage -t --random-seed=76417292471192601569274824800602906818
> > src/sage/graphs/generators/smallgraphs.py # Timed out (and interrupt
> > failed)
> >
> >
> > I don't know what's going on.
>
> Do we officially support Python 3.12 ?
>
> Anyway, it would be useful to see where exactly these tests time out.
>
> Dima
>
> >
> > David.
> >
> > On Friday, May 3, 2024 at 1:08:14 AM UTC+2 Volker Braun wrote:
> >
> > > As always, you can get the latest beta version from the "develop" git
> > > branch. Alternatively, the self-contained source tarball is at
> > > http://www.sagemath.org/download-latest.html
> > >
> > >
> > > 744939e037a (github/develop, tag: 10.4.beta5) Updated SageMath version
> to
> > > 10.4.beta5
> > > e77b3df44ad gh-37915: Replace doctests from jacobian_khuri_makdisi.py
> > > taking too long time
> > > 422c59e95ce gh-37911: Fix overflow in hypergeometric trace
> > > 67f26757bcb gh-37904: Change `SetSystem` representation
> > > a1354a74b91 gh-37883: gap: don't use deprecated LaTeX() and LaTeXObj()
> > > 53566be0ca2 gh-37882: eclib: fix doctests after 20240408 update
> > > 31cf6d3b0fa gh-37872: sage.{topology,homology}: Remove deprecated
> chomp
> > > interface
> > > 75c86c8f28c gh-37870: `sage.ext`: Remove deprecated code
> > > c46302c3a6d gh-37868: `sage.misc.misc`: Remove deprecated code
> > > b14d3ec8dc3 gh-37856: `sage.misc.dist`: Remove; deprecated in #30207
> (2022)
> > > 6753fbdecdc gh-37855: `sage.misc.package`: Remove deprecated code
> > > 9ce51d09089 gh-37853: Work around inconsistent iteration in
> > > `multi_polynomial_sequence.py`
> > > 969b687c5f6 gh-37851: Fix issue 37587 regarding the Link class plot
> method
> > > 620babd49fb gh-37841: `.ci/write-dockerfile.sh`: Move here from
> build/bin/
> > > af6c2085804 gh-37836: fricas/do not get inputform twice
> > > ac9c1b07203 gh-37835: Optimize `DisjointSet`
> > > 6e58d87dcc1 gh-37833: `build/pkgs/{python3,setuptools}`: Update fedora
> > > distro info
> > > 5ab5dc3c3fe gh-37829: src/sage/manifolds/differentiable:
> Docstring/doctest
> > > edits
> > > db630cdf2d9 gh-37827: `sage.tensor`: Tiny doc fixes
> > > 7d0a347f99b gh-37826: FreeModuleAutomorphism: Add more invariants
> > > 698774f5289 gh-37825: `FiniteRankFreeModuleMorphism.display`: Show
> matrix
> > > decorated with basis element names
> > > 3041aac4a21 gh-37823: Fix LaTeX output of FreeModuleTensor.display_comp
> > > 8296cec240f gh-37822: Fix bug in TensorField.apply_map
> > > 71d2a96e0d7 gh-37810: build/pkgs/gambit: Remove
> > > f87f3e3581e gh-37808: Removed non-working and utterly old
> @rename_keyword
> > > in farey_symbol.pyx
> > > d64f1a8accb gh-37807: Added some documentation in the developer's
> guide
> > > regarding deprecation
> > > 68e657c09c3 gh-37802: Add the downward monotonic cone to the cone
> catalogue
> > > abad24ff15f gh-37800: some cython-lint suggestions fixed in real rings
> > > 106c0d76be6 gh-37799: little details in quadratic_forms (pep8, ruff,
> etc)
> > > 2406c159c81 gh-37798: some ruff C4 fixes in combinat
> > > ac8792fc3d2 gh-37797: fix the category of quasi-modular form rings
> > > 1b5a3450555 gh-37793: add links to standard errors in various places
> > > ca3d59a8f09 gh-37792: remove a stray leftover in in sa2si_ZZmod()
> > > e9e3a3db928 gh-37750: CI Build&Test: Fix "test modularized
> distributions"
> > > after #37022
> > > 9097fa25d4b gh-37738: CI Build&Test: Show segfaults using GitHub
> > > annotations
> > > 46b7ec223c3 gh-37722: Remove `CombinatorialClass`
> > > 19b06ac7387 gh-37715: `sage.{calculus,functions,numerical,symbolic}`:
> > > Docstring/doctest cosmetics, `# needs`
> > > e4e33257ab6 gh-37693: Implement the hypercenter and upper central
> series
> > > for finite dimensional Lie algebras
> > > f0a28504d47 gh-37692: `matrix`, `Graph.incidence_matrix`,
> > > `LinearMatroid.representation`: Support constructing
> > > `Hom(CombinatorialFreeModule)` elements
> > > 9783f965806 gh-37681: Quaternion Ideal Pushforwards and Pullbacks
> > > 0a75254c9ea gh-37650: src/sage/features/sagemath.py: Add feature
> SAGE_SRC
> > > 721fc792a23 gh-37492: make sagelib work with singular>=4.3.2.p15
> (future
> > > 4.4)
> > > 2d77ac5ea3c gh-37277: pip 24, setuptools 69.5.1, hatchling 1.22.5,
> > > hatch_fancy_pypi_readme 24.1.0, platformdirs 4.2.0, packaging 24.0,
> > > trove_classifiers 2024.4.10, wheel 0.43.0
> > > 248fde327ef gh-37099: GH Actions: Build platform-independent wheels of
> > > sagemath-environment, sage-setup, sage-sws2rst for PyPI
> > > 90e08c88c60 gh-37057: deprecated functions is_Cone, is_Polyhedron,
> > > is_LatticePolytope
> > > ca1b5e6ea0d gh-37041: update FriCAS to 1.3.10, allow building with sbcl
> > > f19f431d095 gh-36982: Make pyproject.toml the source for build
> dependencies
> > > 23ba3d8f174 gh-36768: Retrieve more information of fundamental groups
> of
> > > plane curves
> > > f633de0146a gh-36498: CI build, doc-build: Run containers explicitly,
> > > separate jobs for pyright, build, modularized tests, long tests
> > > f3847837395 gh-35618: Use `pypa/build` instead of `pip wheel`
> > > c4363fc97eb (tag: 10.4.beta4) Updated SageMath version to 10.4.beta4
> > >
> >
> > --
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> .
>
>
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