On Thu, May 1, 2025 at 12:25 PM David Coudert <[email protected]> wrote:
> > > Le 1 mai 2025 à 18:49, Dima Pasechnik <[email protected]> a écrit : > > here, "ModuleNotFoundError: No module named 'jupyter_core'" seems to > indicate that the error was earlier. > > > In config.log, it is written > > real_configure:70441: will use system package and not install SPKG > jupyter_core > our jupyter_core and ipykernel are much older than upstream. I am not going to work on updating Sage's jupyter/ipython/notebook/sphinx, because it's much easier to just pip install these, and it's a lot of makework. All this stuff should be just purged from sage-distro, as I argued for years. If anyone wants to pick up the torch, welcome. Yes, —with-system-jupyter_core=no hopefully works. > Note that there is no homebrew recipe in > build/pkgs/jupyter_core/distros/ > > I will try adding —with-system-jupyter_core=no > > > By the way, please review https://github.com/sagemath/sage/pull/39985 > > > Done. > > > > > > On Thu, May 1, 2025 at 11:06 AM David Coudert <[email protected]> > wrote: > >> Using https://github.com/sagemath/sage/pull/40033 and --with-system-flint=no >> fix the issue with flint and singular. >> >> Using in addition https://github.com/sagemath/sage/pull/39985, I can >> also compile linbox. >> >> But now it’s failing to compile ipykernel. >> >> >> [ipykernel-6.27.1] Using cached file >> /Users/dcoudert/sage/upstream/ipykernel-6.27.1.tar.gz >> [ipykernel-6.27.1] Setting up build directory >> /Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/var/tmp/sage/build/ipykernel-6.27.1 >> [ipykernel-6.27.1] No patch files found in ../patches >> [ipykernel-6.27.1] Host system: Darwin MAC-04017247 24.4.0 Darwin Kernel >> Version 24.4.0: Fri Apr 11 18:33:47 PDT 2025; >> root:xnu-11417.101.15~117/RELEASE_ARM64_T6000 arm64 >> [ipykernel-6.27.1] C compiler: gcc, Apple clang version 17.0.0 >> (clang-1700.0.13.3), Target: arm64-apple-darwin24.4.0, Thread model: posix, >> InstalledDir: >> /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin >> [ipykernel-6.27.1] No stamp file for package 'ipykernel' in >> /Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/var/lib/sage/installed >> [ipykernel-6.27.1] No spkg-legacy-uninstall script; nothing to do >> [ipykernel-6.27.1] [spkg-install] Installing ipykernel-6.27.1 >> [ipykernel-6.27.1] [spkg-install] * Creating isolated environment: >> venv+pip... >> [ipykernel-6.27.1] [spkg-install] * Installing packages in isolated >> environment: >> [ipykernel-6.27.1] [spkg-install] - hatchling>=1.4 >> [ipykernel-6.27.1] [spkg-install] - jupyter_client>=6 >> [ipykernel-6.27.1] [spkg-install] > >> /Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/bin/python3 -m pip >> [ipykernel-6.27.1] [spkg-install] --python >> /private/var/folders/hw/w6ldqpgn52vdvv03cgbkkr3h3lhtdp/T/build- >> [ipykernel-6.27.1] [spkg-install] env-6_cu53wi/bin/python install >> --use-pep517 --no-warn-script-location --no- >> [ipykernel-6.27.1] [spkg-install] compile -r >> /var/folders/hw/w6ldqpgn52vdvv03cgbkkr3h3lhtdp/T/build- >> [ipykernel-6.27.1] [spkg-install] reqs-9x5l7vuh.txt >> [ipykernel-6.27.1] [spkg-install] < Looking in links: >> /Users/dcoudert/sage/local/var/lib/sage/venv- >> [ipykernel-6.27.1] [spkg-install] python3.12/var/lib/sage/wheels >> [ipykernel-6.27.1] [spkg-install] < Processing >> /Users/dcoudert/sage/local/var/lib/sage/venv- >> [ipykernel-6.27.1] [spkg-install] >> python3.12/var/lib/sage/wheels/jupyter_client-8.3.1-py3-none-any.whl (from >> [ipykernel-6.27.1] [spkg-install] -r >> /var/folders/hw/w6ldqpgn52vdvv03cgbkkr3h3lhtdp/T/build-reqs-9x5l7vuh.txt >> [ipykernel-6.27.1] [spkg-install] (line 1)) >> [ipykernel-6.27.1] [spkg-install] < Processing >> /Users/dcoudert/sage/local/var/lib/sage/venv- >> [ipykernel-6.27.1] [spkg-install] >> python3.12/var/lib/sage/wheels/hatchling-1.25.0-py3-none-any.whl (from -r >> [ipykernel-6.27.1] [spkg-install] >> /var/folders/hw/w6ldqpgn52vdvv03cgbkkr3h3lhtdp/T/build-reqs-9x5l7vuh.txt >> [ipykernel-6.27.1] [spkg-install] (line 2)) >> [ipykernel-6.27.1] [spkg-install] < INFO: pip is looking at multiple >> versions of jupyter-client to determine >> [ipykernel-6.27.1] [spkg-install] which version is compatible with >> other requirements. This could take a >> [ipykernel-6.27.1] [spkg-install] while. >> [ipykernel-6.27.1] [spkg-install] < ERROR: Could not find a version that >> satisfies the requirement jupyter- >> [ipykernel-6.27.1] [spkg-install] core!=5.0.*,>=4.12 (from >> jupyter-client) (from versions: none) >> [ipykernel-6.27.1] [spkg-install] < ERROR: No matching distribution found >> for jupyter-core!=5.0.*,>=4.12 >> [ipykernel-6.27.1] [spkg-install] >> [ipykernel-6.27.1] [spkg-install] Traceback (most recent call last): >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/build/__main__.py", >> line 178, in _handle_build_error >> [ipykernel-6.27.1] [spkg-install] yield >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/build/__main__.py", >> line 429, in main >> [ipykernel-6.27.1] [spkg-install] built = build_call( >> [ipykernel-6.27.1] [spkg-install] ^^^^^^^^^^^ >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/build/__main__.py", >> line 238, in build_package >> [ipykernel-6.27.1] [spkg-install] out = _build(isolation, srcdir, >> outdir, distribution, config_settings, skip_dependency_check, installer) >> [ipykernel-6.27.1] [spkg-install] >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/build/__main__.py", >> line 170, in _build >> [ipykernel-6.27.1] [spkg-install] return >> _build_in_isolated_env(srcdir, outdir, distribution, config_settings, >> installer) >> [ipykernel-6.27.1] [spkg-install] >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/build/__main__.py", >> line 135, in _build_in_isolated_env >> [ipykernel-6.27.1] [spkg-install] >> env.install(builder.build_system_requires) >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/build/env.py", >> line 136, in install >> [ipykernel-6.27.1] [spkg-install] >> self._env_backend.install_requirements(requirements) >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/build/env.py", >> line 265, in install_requirements >> [ipykernel-6.27.1] [spkg-install] run_subprocess(cmd) >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/build/_ctx.py", >> line 71, in run_subprocess >> [ipykernel-6.27.1] [spkg-install] subprocess.run(cmd, >> capture_output=True, check=True, env=env) >> [ipykernel-6.27.1] [spkg-install] File >> "/opt/homebrew/Cellar/[email protected]/3.12.10/Frameworks/Python.framework/Versions/3.12/lib/python3.12/subprocess.py", >> line 571, in run >> [ipykernel-6.27.1] [spkg-install] raise CalledProcessError(retcode, >> process.args, >> [ipykernel-6.27.1] [spkg-install] subprocess.CalledProcessError: Command >> '['/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/bin/python3', >> '-m', 'pip', '--python', >> '/private/var/folders/hw/w6ldqpgn52vdvv03cgbkkr3h3lhtdp/T/build-env-6_cu53wi/bin/python', >> 'install', '--use-pep517', '--no-warn-script-location', '--no-compile', >> '-r', >> '/var/folders/hw/w6ldqpgn52vdvv03cgbkkr3h3lhtdp/T/build-reqs-9x5l7vuh.txt']' >> returned non-zero exit status 1. >> [ipykernel-6.27.1] [spkg-install] >> [ipykernel-6.27.1] [spkg-install] ERROR Command >> '['/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/bin/python3', >> '-m', 'pip', '--python', >> '/private/var/folders/hw/w6ldqpgn52vdvv03cgbkkr3h3lhtdp/T/build-env-6_cu53wi/bin/python', >> 'install', '--use-pep517', '--no-warn-script-location', '--no-compile', >> '-r', >> '/var/folders/hw/w6ldqpgn52vdvv03cgbkkr3h3lhtdp/T/build-reqs-9x5l7vuh.txt']' >> returned non-zero exit status 1. >> [ipykernel-6.27.1] [spkg-install] Warning: building with "python3 -m >> build --wheel --outdir=dist ." failed. >> [ipykernel-6.27.1] [spkg-install] Retrying with "python3 -m build --wheel >> --outdir=dist --no-isolation --skip-dependency-check .". >> [ipykernel-6.27.1] [spkg-install] * Building wheel... >> [ipykernel-6.27.1] [spkg-install] Traceback (most recent call last): >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/pyproject_hooks/_in_process/_in_process.py", >> line 373, in <module> >> [ipykernel-6.27.1] [spkg-install] main() >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/pyproject_hooks/_in_process/_in_process.py", >> line 357, in main >> [ipykernel-6.27.1] [spkg-install] json_out["return_val"] = >> hook(**hook_input["kwargs"]) >> [ipykernel-6.27.1] [spkg-install] >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/pyproject_hooks/_in_process/_in_process.py", >> line 271, in build_wheel >> [ipykernel-6.27.1] [spkg-install] return _build_backend().build_wheel( >> [ipykernel-6.27.1] [spkg-install] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/hatchling/build.py", >> line 58, in build_wheel >> [ipykernel-6.27.1] [spkg-install] return >> os.path.basename(next(builder.build(directory=wheel_directory, >> versions=['standard']))) >> [ipykernel-6.27.1] [spkg-install] >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/hatchling/builders/plugin/interface.py", >> line 147, in build >> [ipykernel-6.27.1] [spkg-install] build_hook.initialize(version, >> build_data) >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/var/tmp/sage/build/ipykernel-6.27.1/src/hatch_build.py", >> line 17, in initialize >> [ipykernel-6.27.1] [spkg-install] from ipykernel.kernelspec import >> make_ipkernel_cmd, write_kernel_spec >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/var/tmp/sage/build/ipykernel-6.27.1/src/ipykernel/__init__.py", >> line 7, in <module> >> [ipykernel-6.27.1] [spkg-install] from .connect import * >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/var/tmp/sage/build/ipykernel-6.27.1/src/ipykernel/connect.py", >> line 12, in <module> >> [ipykernel-6.27.1] [spkg-install] import jupyter_client >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/jupyter_client/__init__.py", >> line 3, in <module> >> [ipykernel-6.27.1] [spkg-install] from .asynchronous import >> AsyncKernelClient >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/jupyter_client/asynchronous/__init__.py", >> line 1, in <module> >> [ipykernel-6.27.1] [spkg-install] from .client import >> AsyncKernelClient # noqa >> [ipykernel-6.27.1] [spkg-install] >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/jupyter_client/asynchronous/client.py", >> line 8, in <module> >> [ipykernel-6.27.1] [spkg-install] from ..channels import >> AsyncZMQSocketChannel, HBChannel >> [ipykernel-6.27.1] [spkg-install] File >> "/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/lib/python3.12/site-packages/jupyter_client/channels.py", >> line 12, in <module> >> [ipykernel-6.27.1] [spkg-install] from jupyter_core.utils import >> ensure_async >> [ipykernel-6.27.1] [spkg-install] ModuleNotFoundError: No module named >> 'jupyter_core' >> [ipykernel-6.27.1] [spkg-install] >> [ipykernel-6.27.1] [spkg-install] ERROR Backend subprocess exited when >> trying to invoke build_wheel >> [ipykernel-6.27.1] [spkg-install] >> ******************************************************************************** >> [ipykernel-6.27.1] [spkg-install] Error building a wheel for >> ipykernel-6.27.1 >> [ipykernel-6.27.1] [spkg-install] >> ******************************************************************************** >> [ipykernel-6.27.1] >> ************************************************************************ >> [ipykernel-6.27.1] Error installing package ipykernel-6.27.1 >> [ipykernel-6.27.1] >> ************************************************************************ >> [ipykernel-6.27.1] Please email sage-devel ( >> http://groups.google.com/group/sage-devel) >> [ipykernel-6.27.1] explaining the problem and including the log files >> [ipykernel-6.27.1] /Users/dcoudert/sage/logs/pkgs/ipykernel-6.27.1.log >> [ipykernel-6.27.1] and >> [ipykernel-6.27.1] /Users/dcoudert/sage/config.log >> [ipykernel-6.27.1] Describe your computer, operating system, etc. >> [ipykernel-6.27.1] If you want to try to fix the problem yourself, >> *don't* just cd to >> [ipykernel-6.27.1] >> /Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/var/tmp/sage/build/ipykernel-6.27.1 >> and type 'make' or whatever is appropriate. >> [ipykernel-6.27.1] Instead, the following commands setup all environment >> variables >> [ipykernel-6.27.1] correctly and load a subshell for you to debug the >> error: >> [ipykernel-6.27.1] (cd >> '/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/var/tmp/sage/build/ipykernel-6.27.1' >> && '/Users/dcoudert/sage/sage' --buildsh) >> [ipykernel-6.27.1] When you are done debugging, you can type "exit" to >> leave the subshell. >> [ipykernel-6.27.1] >> ************************************************************************ >> [ipykernel-6.27.1] real 0m19.726s user 0m0.914s sys 0m0.488s >> make[4]: *** [ipykernel-SAGE_VENV-no-deps] Error 1 >> make[3]: *** >> [/Users/dcoudert/sage/local/var/lib/sage/venv-python3.12/var/lib/sage/installed/ipykernel-6.27.1] >> Error 2 >> make[2]: *** [all-build] Error 2 >> *************************************************************** >> >> >> > -- > You received this message because you are subscribed to the Google Groups > "sage-release" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion visit > https://groups.google.com/d/msgid/sage-release/CAAWYfq0%2BRqKkPTWyhyTmdPBQF7dDoKtPTOEpads%2BSzthmn97Mg%40mail.gmail.com > <https://groups.google.com/d/msgid/sage-release/CAAWYfq0%2BRqKkPTWyhyTmdPBQF7dDoKtPTOEpads%2BSzthmn97Mg%40mail.gmail.com?utm_medium=email&utm_source=footer> > . > > > -- > You received this message because you are subscribed to the Google Groups > "sage-release" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion visit > https://groups.google.com/d/msgid/sage-release/D2AA5F14-E41E-4E31-ACBE-18D5DD49D16A%40gmail.com > <https://groups.google.com/d/msgid/sage-release/D2AA5F14-E41E-4E31-ACBE-18D5DD49D16A%40gmail.com?utm_medium=email&utm_source=footer> > . > -- You received this message because you are subscribed to the Google Groups "sage-release" group. 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