I opened https://github.com/sagemath/sage/issues/40106.
On Wednesday, May 14, 2025 at 1:44:44 PM UTC-7 Dima Pasechnik wrote: > This ought to be reported upstream - I don't think it's something specific > in Sage we do that causes this issue. Rather, it's a deficiency in GAP's > "make install", which is not very well tested, as it doesn't have too many > "consumers". > > At least make it a Sage issue, on which we can CC GAP people. > > Dima > > On Thu, May 15, 2025, 01:39 John H Palmieri <[email protected]> wrote: > >> Thanks, Dima, adding `-Wl,-headerpad_max_install_names` works. (Adding >> `-Wl,-headerpad` >> did not, by the way.) >> >> >> On Tuesday, May 13, 2025 at 5:13:59 PM UTC-7 Dima Pasechnik wrote: >> >>> Hi John, >>> Can you try adding `-Wl,-headerpad_max_install_names` (or, perhaps, >>> `-Wl,-headerpad`) >>> to LDFLAGS for GAP? >>> Dima >>> >>> >>> On Tue, May 13, 2025 at 4:36 PM John H Palmieri <[email protected]> >>> wrote: >>> >>>> This is a very awkward workaround: >>>> >>>> $ ./configure >>>> $ make gap # THIS FAILS >>>> $ ./sage --buildsh >>>> % cd SAGE_ROOT/local/var/tmp/sage/build/gap-4.14.0/src >>>> % make install >>>> % exit # (to exit the buildsh shell) >>>> $ make gap # THIS NOW SUCCEEDS >>>> >>>> Somehow the presence of the file local/lib/libgap.9.dylib (and >>>> libgap.dylib, a symlink pointing to it) lets the build complete, I have no >>>> idea why. >>>> >>>> >>>> On Monday, May 12, 2025 at 9:32:31 AM UTC-7 John H Palmieri wrote: >>>> >>>>> On Monday, May 12, 2025 at 9:31:59 AM UTC-7 John H Palmieri wrote: >>>>> >>>>> On Saturday, May 10, 2025 at 5:07:38 PM UTC-7 Dima Pasechnik wrote: >>>>> >>>>> perhaps it's a proper GAP problem? >>>>> >>>>> can you build GAP standalone? >>>>> >>>>> >>>>> It looks like it. If I unpack the tarball that Sage downloaded, and I >>>>> type `./configure; make`, then I get a functional `gap` executable. >>>>> >>>>> >>>>> (The gap tarball, that is.) >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> On Sun, May 11, 2025, 01:04 John H Palmieri <[email protected]> >>>>> wrote: >>>>> >>>>> Same problem on another similarly configured machine. >>>>> >>>>> On Thursday, May 8, 2025 at 2:11:04 PM UTC-7 John H Palmieri wrote: >>>>> >>>>> As I said before, I don't know how to attach files here. Here are >>>>> links to the files: >>>>> >>>>> https://sites.math.washington.edu/~palmieri/gap-4.14.0.log >>>>> https://sites.math.washington.edu/~palmieri/config.log >>>>> >>>>> On Thursday, May 8, 2025 at 11:47:59 AM UTC-7 Dima Pasechnik wrote: >>>>> >>>>> Hi John, >>>>> please post the complete logs/pkgs/gap...log. From what you posted >>>>> it's not even clear what gcc stands for here. >>>>> Dima >>>>> >>>>> On Thu, May 8, 2025 at 1:31 PM John H Palmieri <[email protected]> >>>>> wrote: >>>>> >>>>> On OS X 15.4.1, latest Xcode, lots of homebrew packages: I cannot >>>>> build gap. (This has been true for a while, not new to this beta >>>>> release.) >>>>> The tail end of the log file: >>>>> >>>>> [spkg-install] /usr/bin/install -c -d -m 0755 >>>>> /Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/var/tmp/sage/build/gap-4.14.0/inst/Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/lib >>>>> [spkg-install] /usr/bin/install -c -m 0644 libgap.9.dylib >>>>> /Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/var/tmp/sage/build/gap-4.14.0/inst/Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/lib >>>>> [spkg-install] ln -sf libgap.9.dylib >>>>> /Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/var/tmp/sage/build/gap-4.14.0/inst/Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/lib/libgap.dylib >>>>> [spkg-install] /usr/bin/install -c -d -m 0755 >>>>> /Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/var/tmp/sage/build/gap-4.14.0/inst/Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/lib/pkgconfig >>>>> [spkg-install] /usr/bin/install -c -m 0644 libgap.pc >>>>> /Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/var/tmp/sage/build/gap-4.14.0/inst/Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/lib/pkgconfig >>>>> [spkg-install] gcc -pthread -lpthread >>>>> -L/Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/lib >>>>> -L/Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/lib >>>>> build/obj/build/main.c.o -lgmp -lz -lreadline >>>>> -L/Users/jpalmier/Sage/TESTING/sage-10.7.beta2/local/var/tmp/sage/build/gap-4.14.0/src >>>>> >>>>> -lgap -o build/gap-install >>>>> [spkg-install] error: >>>>> /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/install_name_tool: >>>>> >>>>> changing install names or rpaths can't be redone for: build/gap-install >>>>> (for architecture arm64) because larger updated load commands do not fit >>>>> (the program must be relinked, and you may need to use -headerpad or >>>>> -headerpad_max_install_names) >>>>> [spkg-install] make[5]: *** [build/gap-install] Error 1 >>>>> >>>>> Suggestions? >>>>> >>>>> (By the way, I interact with Google groups using my browser, not via >>>>> email. How do I attach files? There used to be a button for this, but I >>>>> don't see it any more.) >>>>> >>>>> >>>>> On Tuesday, April 29, 2025 at 3:56:13 PM UTC-7 Volker Braun wrote: >>>>> >>>>> As always, you can get the latest beta version from the "develop" git >>>>> branch. Alternatively, the self-contained source tarball is at >>>>> http://www.sagemath.org/download-latest.html >>>>> >>>>> >>>>> 7888c42db95 (github/develop, tag: 10.7.beta2) Updated SageMath version >>>>> to 10.7.beta2 >>>>> 14e996467f7 gh-39995: typing annotations for is_something in >>>>> knots,quadratic_forms,quivers >>>>> 8156226328c gh-39994: typing annotation for is_something in modules/ >>>>> a5b97563a64 gh-39989: Refactor imports in PoorManMap and Sequence >>>>> classes >>>>> edf324ef728 gh-39987: add some typing annotations in modular folder >>>>> 0ab46d1c7a8 gh-39982: Implement conversion of log(2) to Giac >>>>> 4c7c421f230 gh-39976: fix e_antic patch header >>>>> a8606913389 gh-39972: some fixes for ruff C4 >>>>> a48c9c3f811 gh-39971: micro details in pyx files in matroids >>>>> 9e061a17cfb gh-39970: convert between two implementations of fin-dim >>>>> algebras >>>>> 65a11d4c4c3 gh-39969: Replace conda with mamba for consistency >>>>> f7131a813a0 gh-39968: fix again the pycodestyle linter >>>>> 9da003611db gh-39965: Modified iterator & counter type from int to >>>>> Py_ssize_t throughout Matrix class >>>>> f0e41038c05 gh-39963: Add offset argument to diagonal method >>>>> eb80cc0859c gh-39962: Docs: Migrate developer walkthrough to Meson >>>>> b800a70d0dc gh-39958: some care for unused variables in >>>>> rings/polynomial/ pyx files >>>>> c1a1bc7229d gh-39954: Meson: automatically install into venv if >>>>> activated >>>>> b932b401188 gh-39946: add parameter immutable to methods in >>>>> `src/sage/graphs/graph_decompositions/graph_products.pyx` >>>>> 93bfdb80798 gh-39942: Fix various issues with CI >>>>> bc6bd4e0efd gh-39939: Add sphinx-copybutton to dependency of >>>>> sage-docbuild >>>>> 3678dc6ec12 gh-39936: update givaro to 4.2.1 >>>>> 82553b199ce gh-39935: improve graph backends to fix bug in `lex_BFS` >>>>> 0795808f6d2 gh-39925: add parameter immutable to methods in >>>>> `src/sage/graphs/line_graph.pyx` >>>>> 0cdea6fb801 gh-39884: Make generic polynomial multiplication >>>>> interruptible >>>>> 06d1fde3dbd gh-39856: Improve NotImplementedError for sqrt(Mod(a,n), >>>>> all=True) >>>>> ac81b0b8759 gh-39852: Handle empty matrices over univariate polynomials >>>>> 3e469e136e3 gh-39792: Add Simplified Chinese translation of >>>>> a_tour_of_sage and tutorial >>>>> d0ed6df699a gh-39783: Add LINS to gap_packages >>>>> b36120dd9e2 gh-39716: Added code to calculate crt for non-coprime >>>>> moduli in Integer >>>>> 3dd3925708a gh-39661: Changed gens to tuple in ModularFormsSpace. >>>>> c5972879f7d gh-39660: Changed gens to tuple in >>>>> AbstractLinearCodeNoMetric, mwrank_EllipticCurve, and FiniteSubgroup. >>>>> 09dd1efec2c gh-39636: cython-lint for calculus/ folder >>>>> e7eabc46c40 gh-39480: Added enhancement for power series that allows >>>>> access to the coefficients of specific terms >>>>> d76572e8b07 gh-39436: Refactor O() and fix O() for lazy power series >>>>> ring >>>>> c3a4aa64425 gh-39279: Show signature for binding=False cython functions >>>>> e0cf1e41d41 (tag: 10.7.beta1) Updated SageMath version to 10.7.beta1 >>>>> >>>>> -- >>>>> >>>>> You received this message because you are subscribed to the Google >>>>> Groups "sage-release" group. >>>>> To unsubscribe from this group and stop receiving emails from it, send >>>>> an email to [email protected]. >>>>> >>>>> To view this discussion visit >>>>> https://groups.google.com/d/msgid/sage-release/b2cb70e9-1465-4989-bbb0-2468abf268fbn%40googlegroups.com >>>>> >>>>> <https://groups.google.com/d/msgid/sage-release/b2cb70e9-1465-4989-bbb0-2468abf268fbn%40googlegroups.com?utm_medium=email&utm_source=footer> >>>>> . >>>>> >>>>> -- >>>>> You received this message because you are subscribed to the Google >>>>> Groups "sage-release" group. >>>>> To unsubscribe from this group and stop receiving emails from it, send >>>>> an email to [email protected]. >>>>> >>>>> To view this discussion visit >>>>> https://groups.google.com/d/msgid/sage-release/72b30850-1e88-4871-a64e-e3d7bf7668c0n%40googlegroups.com >>>>> >>>>> <https://groups.google.com/d/msgid/sage-release/72b30850-1e88-4871-a64e-e3d7bf7668c0n%40googlegroups.com?utm_medium=email&utm_source=footer> >>>>> . >>>>> >>>>> -- >>>> You received this message because you are subscribed to the Google >>>> Groups "sage-release" group. >>>> To unsubscribe from this group and stop receiving emails from it, send >>>> an email to [email protected]. >>>> >>> To view this discussion visit >>>> https://groups.google.com/d/msgid/sage-release/b0f285e8-ed03-4d5c-bf21-a7f77db9b002n%40googlegroups.com >>>> >>>> <https://groups.google.com/d/msgid/sage-release/b0f285e8-ed03-4d5c-bf21-a7f77db9b002n%40googlegroups.com?utm_medium=email&utm_source=footer> >>>> . >>>> >>> -- >> You received this message because you are subscribed to the Google Groups >> "sage-release" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> 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