Hi,
I've had problems upgrading to version 1.5.0.2 at work and at home.
(Do I need to do a clean install for this upgrade?) I probably should
say that I tried to upgrade both to 1.5, without success, but then
when I saw a new version I assumed that it was just a problem with
that version.
At work it is a dual Xeon machine running Fedora Core 5 (kernel
2.6.17). It seemed to upgrade fine, but I do not get the usual
message of "upgrade seems to have succeeded" (or something like that).
It ended with:
############
.........
byte-compiling
/scratch/local/sage-1.4/local/lib/python2.5/site-packages/Crypto/test.py
to test.pyc
byte-compiling
/scratch/local/sage-1.4/local/lib/python2.5/site-packages/Crypto/Cipher/__init__.py
to __init__.pyc
running install_egg_info
Writing
/scratch/local/sage-1.4/local/lib/python2.5/site-packages/pycrypto-2.0.1-py2.5.egg-info
real 0m8.965s
user 0m8.349s
sys 0m0.596s
Successfully installed pycrypto-2.0.1
Now cleaning up tmp files.
Making SAGE/Python scripts relocatable...
Making script relocatable
real 36m11.751s
user 29m29.911s
sys 4m24.369s
boole[~]$
############
Now, if I try to run:
#################
boole[~]$ sage
--------------------------------------------------------
| SAGE Version 1.5.0.2, Build Date: 2006-12-13 |
| Distributed under the GNU General Public License V2. |
--------------------------------------------------------
---------------------------------------------------------------------------
<type 'exceptions.ImportError'> Traceback (most recent call last)
/scratch/local/sage-1.4/local/bin/<ipython console> in <module>()
/scratch/local/sage-1.4/local/lib/python2.5/site-packages/sage/all_cmdline.py
in <module>()
----> 1 from sage.all import *
2
/scratch/local/sage-1.4/local/lib/python2.5/site-packages/sage/all.py
in <module>()
54 get_sigs()
55
---> 56 from sage.rings.integer import pmem_malloc
57 pmem_malloc()
58
/scratch/local/sage-1.4/local/bin/gen.pxd in integer()
<type 'exceptions.ImportError'>:
/scratch/local/sage-1.4/local/lib/python2.5/site-packages/sage/libs/pari/gen.so:
undefined symbol: sig_handle
sage:
################
At home, I have a AMD XP running on Debian Etch (kernel 2.6.17). It
seems to have succeed, but it shows the previous version:
##################
debian[~]$ sage
--------------------------------------------------------
| SAGE Version 1.3.7.3.3, Build Date: 2006-09-21 |
| Distributed under the GNU General Public License V2. |
--------------------------------------------------------
sage: version()
'SAGE Version 1.3.7.3.3, Build Date: 2006-09-21'
sage:
##################
Here is the end of the compilation process:
############
............
Successfully installed gmp-4.2.1.p3
make: Circular installed/ <- installed/ dependency dropped.
make: Circular installed/ <- installed/ dependency dropped.
make: Circular installed/ <- installed/ dependency dropped.
make: Circular installed/libpng-1.2.8.p0 <- installed/ dependency dropped.
make: Circular installed/libpng-1.2.8.p0 <- installed/ dependency dropped.
make: Circular installed/libpng-1.2.8.p0 <- installed/ dependency dropped.
make: Circular installed/ <- installed/ dependency dropped.
make: Circular installed/python-2.5.p3 <- installed/ dependency dropped.
make: Circular installed/python-2.5.p3 <- installed/ dependency dropped.
make: Circular installed/python-2.5.p3 <- installed/ dependency dropped.
make: Circular installed/zlib-1.2.3.p1 <- installed/ dependency dropped.
make: Circular installed/zlib-1.2.3.p1 <- installed/ dependency dropped.
make: Circular installed/zlib-1.2.3.p1 <- installed/ dependency dropped.
make: Circular installed/termcap-1.3.1 <- installed/ dependency dropped.
make: Circular installed/termcap-1.3.1 <- installed/ dependency dropped.
make: Circular installed/termcap-1.3.1 <- installed/ dependency dropped.
make: Circular installed/readline-5.2 <- installed/ dependency dropped.
make: Circular installed/readline-5.2 <- installed/ dependency dropped.
make: Circular installed/readline-5.2 <- installed/ dependency dropped.
# If Python is upgraded, all other dependent packages should be rebuilt.
rm -f installed/ipython-20061028 installed/pexpect-2.0
installed/twisted-2.4.0.p1 installed/mercurial-0.9.1.p2 installed/
installed/ installed/matplotlib-0.87.7 installed/zodb3-3.6.0
installed/ installed/pyrexembed-0.1.1-20060517 installed/sage-1.5.0.2
installed/ installed/weave
rm: cannot remove `installed/': Is a directory
rm: cannot remove `installed/': Is a directory
rm: cannot remove `installed/': Is a directory
rm: cannot remove `installed/': Is a directory
make: *** [installed/python-2.5.p3] Error 1
real 2m22.043s
user 1m24.725s
sys 0m42.247s
***************************************************
The upgrade appears to have succeeded!
Now running 'make clean' to delete temporary build files
that were created during the ugprade.
***************************************************
echo "Deleted spkg/build"
Deleted spkg/build
rm -rf spkg/build
mkdir -p spkg/build
echo "Deleted spkg/archive"
Deleted spkg/archive
rm -rf spkg/archive
mkdir -p spkg/archive
echo "Deleted devel/old"
Deleted devel/old
rm -rf devel/old
mkdir -p devel/old
Using SAGE Server http://sage.math.washington.edu/sage//packages
http://sage.math.washington.edu/sage//packages/standard/list --> list
[.]
http://sage.math.washington.edu/sage//packages/standard/deps --> deps
[.]
http://sage.math.washington.edu/sage//packages/standard/newest_version
--> newest_version
[.]
http://sage.math.washington.edu/sage//packages/standard/README --> README
[.]
echo "Deleted spkg/build"
Deleted spkg/build
rm -rf spkg/build
mkdir -p spkg/build
echo "Deleted spkg/archive"
Deleted spkg/archive
rm -rf spkg/archive
mkdir -p spkg/archive
echo "Deleted devel/old"
Deleted devel/old
rm -rf devel/old
mkdir -p devel/old
/bin/ls: freetype-*.spkg: No such file or directory
standard/deps:28: warning: overriding commands for target `installed/'
standard/deps:25: warning: ignoring old commands for target `installed/'
standard/deps:31: warning: overriding commands for target `installed/'
standard/deps:28: warning: ignoring old commands for target `installed/'
standard/deps:101: warning: overriding commands for target `installed/'
standard/deps:31: warning: ignoring old commands for target `installed/'
standard/deps:104: warning: overriding commands for target `installed/'
standard/deps:101: warning: ignoring old commands for target `installed/'
standard/deps:117: warning: overriding commands for target `installed/'
standard/deps:104: warning: ignoring old commands for target `installed/'
standard/deps:120: warning: overriding commands for target `installed/'
standard/deps:117: warning: ignoring old commands for target `installed/'
standard/deps:126: warning: overriding commands for target `installed/'
standard/deps:120: warning: ignoring old commands for target `installed/'
standard/deps:135: warning: overriding commands for target `installed/'
standard/deps:126: warning: ignoring old commands for target `installed/'
standard/deps:144: warning: overriding commands for target `installed/'
standard/deps:135: warning: ignoring old commands for target `installed/'
standard/deps:182: warning: overriding commands for target `installed/'
standard/deps:144: warning: ignoring old commands for target `installed/'
standard/deps:186: warning: overriding commands for target `installed/'
standard/deps:182: warning: ignoring old commands for target `installed/'
make: Circular installed/gmp-4.2.1.p3 <- installed/ dependency dropped.
make: Circular installed/gmp-4.2.1.p3 <- installed/ dependency dropped.
make: Circular installed/gmp-4.2.1.p3 <- installed/ dependency dropped.
make: Circular installed/ <- installed/ dependency dropped.
make: Circular installed/ <- installed/ dependency dropped.
make: Circular installed/ <- installed/ dependency dropped.
make: Circular installed/libpng-1.2.8.p0 <- installed/ dependency dropped.
make: Circular installed/libpng-1.2.8.p0 <- installed/ dependency dropped.
make: Circular installed/libpng-1.2.8.p0 <- installed/ dependency dropped.
make: Circular installed/ <- installed/ dependency dropped.
make: Circular installed/python-2.5.p3 <- installed/ dependency dropped.
make: Circular installed/python-2.5.p3 <- installed/ dependency dropped.
make: Circular installed/python-2.5.p3 <- installed/ dependency dropped.
make: Circular installed/zlib-1.2.3.p1 <- installed/ dependency dropped.
make: Circular installed/zlib-1.2.3.p1 <- installed/ dependency dropped.
make: Circular installed/zlib-1.2.3.p1 <- installed/ dependency dropped.
make: Circular installed/termcap-1.3.1 <- installed/ dependency dropped.
make: Circular installed/termcap-1.3.1 <- installed/ dependency dropped.
make: Circular installed/termcap-1.3.1 <- installed/ dependency dropped.
make: Circular installed/readline-5.2 <- installed/ dependency dropped.
make: Circular installed/readline-5.2 <- installed/ dependency dropped.
make: Circular installed/readline-5.2 <- installed/ dependency dropped.
# If Python is upgraded, all other dependent packages should be rebuilt.
rm -f installed/ipython-20061028 installed/pexpect-2.0
installed/twisted-2.4.0.p1 installed/mercurial-0.9.1.p2 installed/
installed/ installed/matplotlib-0.87.7 installed/zodb3-3.6.0
installed/ installed/pyrexembed-0.1.1-20060517 installed/sage-1.5.0.2
installed/ installed/weave
rm: cannot remove `installed/': Is a directory
rm: cannot remove `installed/': Is a directory
rm: cannot remove `installed/': Is a directory
rm: cannot remove `installed/': Is a directory
make: *** [installed/python-2.5.p3] Error 1
real 0m0.022s
user 0m0.016s
sys 0m0.004s
***************************************************
The upgrade appears to have succeeded!
Now running 'make clean' to delete temporary build files
that were created during the ugprade.
***************************************************
echo "Deleted spkg/build"
Deleted spkg/build
rm -rf spkg/build
mkdir -p spkg/build
echo "Deleted spkg/archive"
Deleted spkg/archive
rm -rf spkg/archive
mkdir -p spkg/archive
echo "Deleted devel/old"
Deleted devel/old
rm -rf devel/old
mkdir -p devel/old
####################
Any ideas?
Thanks,
Luis
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