Hi Aleksey,
On Tue, Jul 14, 2009 at 6:41 PM, Aleksey
Gogolev<[email protected]> wrote:
>
> Hello!
>
> I tried to install package "cluster" for R and got this:
>
> ----------------------------------------------------------------------
> | Sage Version 4.0.2, Release Date: 2009-06-18 |
> | Type notebook() for the GUI, and license() for information. |
> ----------------------------------------------------------------------
> sage: r.install_package("cluster")
> Error: object "sage1" not found
> sage: r.install_package("cluster")
> Error: object "sage2" not found
> sage: r.install_package("cluster")
>
> Can somebody give a hint what is wrong?
The correct command is r.install_packages(); notice the extra "s". For example:
----------------------------------------------------------------------
| Sage Version 4.1, Release Date: 2009-07-09 |
| Type notebook() for the GUI, and license() for information. |
----------------------------------------------------------------------
sage: r.install_packages("cluster")
0.00user 0.00system 0:00.00elapsed 0%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+212minor)pagefaults 0swaps
R version 2.6.1 (2007-11-26)
Copyright (C) 2007 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> options(repos="http://cran.r-project.org/";); install.packages("cluster")
trying URL 'http://cran.r-project.org/src/contrib/cluster_1.12.0.tar.gz'
Content type 'application/x-gzip' length 215041 bytes (210 Kb)
opened URL
==================================================
downloaded 210 Kb
WARNING: ignoring environment value of R_HOME
.: 121: Can't open /scratch/mvngu/sage-4.1/local/lib/R/share/sh/dcf.sh
The downloaded packages are in
/tmp/Rtmpq9wIvZ/downloaded_packages
Updating HTML index of packages in '.Library'
Warning messages:
1: In install.packages("cluster") :
installation of package 'cluster' had non-zero exit status
2: In tools:::unix.packages.html(.Library) :
cannot create HTML package index
>
Please restart Sage or restart the R interface (via r.restart()) in
order to use 'cluster'.
--
Regards
Minh Van Nguyen
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