So. Tried to compile from source. Here's the output from make, followed by config.log:
===MAKE OUTPUT=== % make cd spkg && "../spkg/pipestatus" "./install all 2>&1" "tee -a ../ install.log" *** ALL ENVIRONMENT VARIABLES BEFORE BUILD: *** SAGENB=sagenb-0.8.19 GD=gd-2.0.35.p5 CONWAY=conway_polynomials-0.2 CLIQUER=cliquer-1.2.p9 READLINE=readline-6.1 JINJA2=jinja2-2.5.5 SAGE_LOGS=/home/emhs/sage-4.7.1/spkg/logs LESS_TERMCAP_mb= PEXPECT=pexpect-2.0.p4 F2C=f2c-20070816.p2 MATPLOTLIB=matplotlib-1.0.1 G2RED=genus2reduction-0.3.p8 XDG_DATA_HOME=/home/emhs/.local/share LESS_TERMCAP_md= LIBM4RI=libm4ri-20100701.p1 LESS_TERMCAP_me= SAGE_BZIP2=bzip2-1.0.5 TERM=xterm SHELL=/bin/zsh CYTHON=cython-0.14.1.p3 MAKEFLAGS= SSH_CLIENT=209.129.161.251 13849 22 SQLALCHEMY=sqlalchemy-0.5.8 DOCUTILS=docutils-0.7.p0 ZNPOLY=zn_poly-0.9.p5 SYMMETRICA=symmetrica-2.0.p5 GIVARO=givaro-3.2.13rc2.p2 SAGETEX=sagetex-2.2.5 MPFR=mpfr-2.4.2 SYMPY=sympy-0.6.4.p0 POLYTOPES_DB=polytopes_db-20100210 OLDPWD=/home/emhs/sage-4.7.1 EXAMPLES=examples-4.7.1 ATLAS=atlas-3.8.3.p16 PREREQ=prereq-0.9 DIR=dir-0.1 LESS_TERMCAP_ue= TACHYON=tachyon-0.98.9.p3 SSH_TTY=/dev/ttyp0 MPFI=mpfi-1.3.4-cvs20071125.p8 MERCURIAL=mercurial-1.6.4.p0 CDDLIB=cddlib-094f.p8 vcs_info_msg_1_= ECLIB=eclib-20100711 USER=emhs R=r-2.10.1.p4 SPHINX=sphinx-1.0.4.p6 LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*. 7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=00;36:*.au=00;36:*.flac=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:*.axa=00;36:*.oga=00;36:*.spx=00;36:*.xspf=00;36: LIBGCRYPT=libgcrypt-1.4.4.p3 CVXOPT=cvxopt-1.1.3 BOEHM_GC=boehm_gc-7.1.p7 TERMCAP=termcap-1.3.1.p1 MPIR=mpir-1.2.2.p2 ZODB=zodb3-3.7.0.p4 GRAPHS=graphs-20070722.p1 ICONV=iconv-1.13.1.p3 ECL=ecl-11.1.1.p1 CEPHES=cephes-2.8 SAGE_LOCAL=/home/emhs/sage-4.7.1/local MAKELEVEL=1 SAGE_SCRIPTS=sage_scripts-4.7.1 ECM=ecm-6.2.1.p2 PAGER=less TWISTED=twisted-9.0.p2 RUBIKS=rubiks-20070912.p17 FREETYPE=freetype-2.3.5.p3 MFLAGS= PYGMENTS=pygments-1.3.1.p0 LESS_TERMCAP_us= XDG_CONFIG_DIRS=/etc/xdg GAP=gap-4.4.12.p6 MAIL=/var/mail/emhs PATH=/home/emhs/sage-4.7.1:/home/emhs/sage-4.7.1/local/bin:/usr/local/ bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/bin/core_perl IML=iml-1.0.1.p13 LAPACK=lapack-20071123.p2 EXTCODE=extcode-4.7.1 BLAS=blas-20070724 ZLIB=zlib-1.2.5 SINGULAR=singular-3-1-1-4.p12 GNUTLS=gnutls-2.2.1.p5 POLYBORI=polybori-0.7.0.p4 LIBGPG_ERROR=libgpg_error-1.6.p3 PWD=/home/emhs/sage-4.7.1/spkg JAVA_HOME=/usr/lib/jvm/java-6-openjdk LCALC=lcalc-20100428-1.23.p6 EDITOR=vim vcs_info_msg_0_= SCONS=scons-1.2.0 LINBOX=linbox-1.1.6.p3 OPENCDK=opencdk-0.6.6.p5 LANG=en_US.utf8 FLINTQS=flintqs-20070817.p5 GDMODULE=gdmodule-0.56.p7 SCIPY=scipy-0.9 SAGE_ROOT_REPO=sage_root-4.7.1 GFAN=gfan-0.4plus.p1 SAGE_ROOT=/home/emhs/sage-4.7.1 SAGE=sage-4.7.1 RATPOINTS=ratpoints-2.1.3.p1 NUMPY=numpy-1.5.1 PARI=pari-2.4.3.alpha.p7 PATCH=patch-2.5.9.p0 GLPK=glpk-4.44 PPL=ppl-0.11.2 PALP=palp-1.1.p3 SHLVL=4 HOME=/home/emhs PYCRYPTO=pycrypto-2.1.0 GSL=gsl-1.15 PYTHON_GNUTLS=python_gnutls-1.1.4.p7 XDG_CONFIG_HOME=/home/emhs/.config IPYTHON=ipython-0.9.1.p0 FLINT=flint-1.5.0.p5 XDG_CACHE_HOME=/home/emhs/.cache PYTHONPATH=/home/emhs/sage-4.7.1/local LOGNAME=emhs SQLITE=sqlite-3.7.5 MPMATH=mpmath-0.17 LESS_TERMCAP_so= J2SDKDIR=/usr/lib/jvm/java-6-openjdk SSH_CONNECTION=209.129.161.251 13849 96.126.101.28 22 XDG_DATA_DIRS=/usr/share/:/usr/local/share/ NTL=ntl-5.5.2 FORTRAN=fortran-20100629 PIL=pil-1.1.6.p4 BROWSER=w3m SYMPOW=sympow-1.018.1.p9 PYNAC=pynac-0.2.3 MAXIMA=maxima-5.23.2.p0 FPLLL=libfplll-3.0.12.p1 SETUPTOOLS=setuptools-0.6.16 J2REDIR=/usr/lib/jvm/java-6-openjdk/jre MOIN=moin-1.9.1.p2 ELLIPTIC_CURVES=elliptic_curves-0.1 BOOST_CROPPED=boost-cropped-1.34.1 PYTHON=python-2.6.4.p11 NETWORKX=networkx-1.2.p1 LIBPNG=libpng-1.2.35.p3 G_BROKEN_FILENAMES=1 COLORTERM=yes LESS_TERMCAP_se= _=/usr/bin/env *********************************************** make[1]: Entering directory `/home/emhs/sage-4.7.1/spkg' /home/emhs/sage-4.7.1/spkg/pipestatus "base/prereq-0.9-install 2>&1" "tee -a /home/emhs/sage-4.7.1/spkg/logs/prereq-0.9.log" Starting prerequisite check. Machine: Linux li334-28 3.0.0-linode35 #1 SMP Tue Aug 2 12:03:19 EDT 2011 i686 Intel(R) Xeon(R) CPU L5520 @ 2.27GHz GenuineIntel GNU/Linux prereq-0.9/ prereq-0.9/aclocal.m4 prereq-0.9/autom4te.cache/ prereq-0.9/config.guess prereq-0.9/config.h.in prereq-0.9/config.h.in~ prereq-0.9/config.sub prereq-0.9/configure prereq-0.9/configure.ac prereq-0.9/depcomp prereq-0.9/install-sh prereq-0.9/m4/ prereq-0.9/Makefile.am prereq-0.9/Makefile.in prereq-0.9/missing prereq-0.9/m4/ax_c_check_flag.m4 prereq-0.9/m4/ax_gcc_option.m4 prereq-0.9/m4/ax_gcc_version.m4 prereq-0.9/m4/ax_gxx_option.m4 prereq-0.9/m4/ax_gxx_version.m4 prereq-0.9/m4/ax_prog_perl_version.m4 prereq-0.9/m4/ax_with_perl.4 prereq-0.9/autom4te.cache/output.0 prereq-0.9/autom4te.cache/output.1 prereq-0.9/autom4te.cache/output.2 prereq-0.9/autom4te.cache/requests prereq-0.9/autom4te.cache/traces.0 prereq-0.9/autom4te.cache/traces.1 prereq-0.9/autom4te.cache/traces.2 checking for a BSD-compatible install... /bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking for gcc... gcc checking whether the C compiler works... no configure: error: in `/home/emhs/sage-4.7.1/spkg/build/prereq-0.9': configure: error: C compiler cannot create executables See `config.log' for more details ERROR: You do not have all of the prerequisites needed to build Sage from source. See the errors above. make[1]: *** [installed/prereq-0.9] Error 1 make[1]: Leaving directory `/home/emhs/sage-4.7.1/spkg' real 0m1.679s user 0m0.149s sys 0m0.480s Error building Sage. make: *** [build] Error 1 ===END MAKE=== ===Config.log OUTPUT=== This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by Sage configure x.y.z, which was generated by GNU Autoconf 2.68. Invocation command line was $ ./configure ## --------- ## ## Platform. ## ## --------- ## hostname = li334-28 uname -m = i686 uname -r = 3.0.0-linode35 uname -s = Linux uname -v = #1 SMP Tue Aug 2 12:03:19 EDT 2011 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = i686 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /home/emhs/sage-4.7.1 PATH: /home/emhs/sage-4.7.1/local/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /bin PATH: /usr/local/sbin PATH: /usr/sbin PATH: /sbin PATH: /usr/bin/core_perl ## ----------- ## ## Core tests. ## ## ----------- ## configure:2341: checking for a BSD-compatible install configure:2409: result: /bin/install -c configure:2420: checking whether build environment is sane configure:2470: result: yes configure:2611: checking for a thread-safe mkdir -p configure:2650: result: /bin/mkdir -p configure:2663: checking for gawk configure:2679: found /usr/bin/gawk configure:2690: result: gawk configure:2701: checking whether make sets $(MAKE) configure:2723: result: yes configure:2815: checking build system type configure:2829: result: i686-pc-linux-gnu configure:2849: checking host system type configure:2862: result: i686-pc-linux-gnu configure:2948: checking for gcc configure:2964: found /usr/bin/gcc configure:2975: result: gcc configure:3204: checking for C compiler version configure:3213: gcc --version >&5 gcc (GCC) 4.6.1 20110819 (prerelease) Copyright (C) 2011 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:3224: $? = 0 configure:3213: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/i686-pc-linux-gnu/4.6.1/lto-wrapper Target: i686-pc-linux-gnu Configured with: /build/src/gcc-4.6-20110819/configure --prefix=/usr -- libdir=/u sr/lib --libexecdir=/usr/lib --mandir=/usr/share/man --infodir=/usr/ share/info - -with-bugurl=https://bugs.archlinux.org/ --enable-languages=c,c+ +,ada,fortran,go ,lto,objc,obj-c++ --enable-shared --enable-threads=posix --with-system- zlib --en able-__cxa_atexit --disable-libunwind-exceptions --enable-clocale=gnu --enable-g nu-unique-object --enable-linker-build-id --with-ppl --enable-cloog- backend=isl --enable-lto --enable-gold --enable-ld=default --enable-plugin --with- plugin-ld= ld.gold --disable-multilib --disable-libssp --disable-libstdcxx-pch -- enable-che cking=release Thread model: posix gcc version 4.6.1 20110819 (prerelease) (GCC) configure:3224: $? = 0 configure:3213: gcc -V >&5 gcc: error: unrecognized option '-V' gcc: fatal error: no input files compilation terminated. configure:3224: $? = 1 configure:3213: gcc -qversion >&5 gcc: error: unrecognized option '-qversion' gcc: fatal error: no input files compilation terminated. configure:3224: $? = 1 configure:3244: checking whether the C compiler works configure:3266: gcc conftest.c >&5 /usr/lib/gcc/i686-pc-linux-gnu/4.6.1/cc1: error while loading shared libraries: libcloog-isl.so.2: cannot open shared object file: No such file or directory configure:3270: $? = 1 configure:3308: result: no configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Sage" | #define PACKAGE_TARNAME "sage" | #define PACKAGE_VERSION "x.y.z" | #define PACKAGE_STRING "Sage x.y.z" | #define PACKAGE_BUGREPORT "[email protected]" | #define PACKAGE_URL "" | #define PACKAGE "sage" | #define VERSION "x.y.z" | /* end confdefs.h. */ | | int | main () | { | | ; | return 0; | } configure:3313: error: in `/home/emhs/sage-4.7.1/spkg/build/ prereq-0.9': configure:3315: error: C compiler cannot create executables See `config.log' for more details ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=i686-pc-linux-gnu ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set= ac_cv_env_FC_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_SAGE64_set= ac_cv_env_SAGE64_value= ac_cv_env_SAGE_FORTRAN_LIB_set= ac_cv_env_SAGE_FORTRAN_LIB_value= ac_cv_env_SAGE_FORTRAN_set= ac_cv_env_SAGE_FORTRAN_value= ac_cv_env_YACC_set= ac_cv_env_YACC_value= ac_cv_env_YFLAGS_set= ac_cv_env_YFLAGS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_host=i686-pc-linux-gnu ac_cv_path_install='/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_make_make_set=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /home/emhs/sage-4.7.1/spkg/build/prereq-0.9/missing --run aclo cal-1.11' AMDEPBACKSLASH='' AMDEP_FALSE='' AMDEP_TRUE='' AMTAR='${SHELL} /home/emhs/sage-4.7.1/spkg/build/prereq-0.9/missing -- run tar' AUTOCONF='${SHELL} /home/emhs/sage-4.7.1/spkg/build/prereq-0.9/missing --run aut oconf' AUTOHEADER='${SHELL} /home/emhs/sage-4.7.1/spkg/build/prereq-0.9/ missing --run a utoheader' AUTOMAKE='${SHELL} /home/emhs/sage-4.7.1/spkg/build/prereq-0.9/missing --run aut omake-1.11' AWK='gawk' CC='gcc' CCDEPMODE='' CFLAGS='' CPP='' CPPFLAGS='' CXX='' CXXCPP='' CXXDEPMODE='' CXXFLAGS='' CYGPATH_W='echo' DEFS='' DEPDIR='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='' EXEEXT='' FC='' FCFLAGS='' GCC_VERSION='' GREP='' GXX_VERSION='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LDFLAGS='' LEX='' LEXLIB='' LEX_OUTPUT_ROOT='' LIBOBJS='' LIBS='' LTLIBOBJS='' MAKEINFO='${SHELL} /home/emhs/sage-4.7.1/spkg/build/prereq-0.9/missing --run mak einfo' MKDIR_P='/bin/mkdir -p' OBJEXT='' PACKAGE='sage' PACKAGE_BUGREPORT='[email protected]' PACKAGE_NAME='Sage' PACKAGE_STRING='Sage x.y.z' PACKAGE_TARNAME='sage' PACKAGE_URL='' PACKAGE_VERSION='x.y.z' PATH_SEPARATOR=':' PERL='' SAGE64='' SAGE_FORTRAN='' SAGE_FORTRAN_LIB='' SET_MAKE='' SHELL='/bin/sh' STRIP='' VERSION='x.y.z' YACC='' YFLAGS='' ac_ct_CC='gcc' ac_ct_CXX='' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='' am__fastdepCC_FALSE='' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='' am__fastdepCXX_TRUE='' am__include='' am__isrc='' am__leading_dot='.' am__quote='' am__tar='${AMTAR} chof - "$$tardir"' am__untar='${AMTAR} xf -' bindir='${exec_prefix}/bin' build='i686-pc-linux-gnu' build_alias='' build_cpu='i686' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='NONE' found_ar='' found_bash='' found_latex='' found_ld='' found_m4='' found_ranlib='' found_strip='' host='i686-pc-linux-gnu' host_alias='' host_cpu='i686' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /home/emhs/sage-4.7.1/spkg/build/prereq-0.9/ install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='/bin/mkdir -p' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='NONE' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "Sage" #define PACKAGE_TARNAME "sage" #define PACKAGE_VERSION "x.y.z" #define PACKAGE_STRING "Sage x.y.z" #define PACKAGE_BUGREPORT "[email protected]" #define PACKAGE_URL "" #define PACKAGE "sage" #define VERSION "x.y.z" configure: exit 77 ===END config.log=== On Aug 29, 1:38 pm, Elliott Seyler <[email protected]> wrote: > Well, here's the catch. I'm running Arch on both my computers (server > and laptop) with the same, repo-installed sage package on both. Only > on the server do I have trouble. > > On Aug 29, 1:37 pm, Harald Schilly <[email protected]> wrote: > > > > > > > > > Hi Elliott > > > On Monday, August 29, 2011 10:26:04 PM UTC+2, Elliott Seyler wrote: > > > > It's got a fresh > > > install of Sage 4.7.1 on it from the Arch repos. > > > Well, I fear this is an issue for the arch linux guys. Does anyone of them > > read this list? Is there a way to contact the maintainers? I can only > > suggest you to try building from source (it's not hard, just takes a while), > > and try again. > > > H -- To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/sage-support URL: http://www.sagemath.org
