Aaron E-J wrote:
I am interested in contributing to the sage cell server and am going through
the steps outlined in
the readme in the https://github.com/sagemath/sagecell#id1";>github page. When I
get to step #5, I
get the following error message that is detailed below.
FWIW, you already failed in step 2 ("Compile Sage 5.8") ... ;-)
You grabbed a binary distribution of Sage *5.9*, which was released
*after* the sagecell spkg you're trying to install, so it's not too
surprising that the patches no longer apply.
So either retry with Sage 5.8, or wait for more helpful replies ...
(I *think* a binary distribution might work as well, but I'm not sure.)
-leif
I am running this on a kubuntu virtual machine (VMWare) but I don't see that
should matter. Is there another way to achieve this? Can I just download and
unzip the archive? If this is the case, where do I unzip it to? Any insight as
to what the issue might be is greatly appreciated, thanks!
aaronej@ubuntu:~/sage/sage-5.9-linux-64bit-ubuntu_12.04.2_lts-x86_64-Linux$
./sage -i
http://sage.math.washington.edu/home/jason/sagecell-spkg/sagecell-2013-04-05.spkg
Attempting to download package sagecell-2013-04-05
Downloading sagecell-2013-04-05.spkg.
[............................................................]
sagecell-2013-04-05
====================================================
Extracting package
/home/aaronej/sage/sage-5.9-linux-64bit-ubuntu_12.04.2_lts-x86_64-Linux/spkg/optional/sagecell-2013-04-05.spkg
-rw-rw-r-- 1 aaronej aaronej 60793713 May 18 17:36
/home/aaronej/sage/sage-5.9-linux-64bit-ubuntu_12.04.2_lts-x86_64-Linux/spkg/optional/sagecell-2013-04-05.spkg
Finished extraction
****************************************************
Host system:
Linux ubuntu 3.8.0-21-generic #32-Ubuntu SMP Tue May 14 22:16:46 UTC 2013
x86_64 x86_64 x86_64 GNU/Linux
****************************************************
C compiler: gcc
C compiler version:
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/home/aaronej/sage/sage-5.9-linux-64bit-ubuntu_12.04.2_lts-x86_64-Linux/local/bin/../libexec/gcc/x86_64-unknown-linux-gnu/4.7.2/lto-wrapper
Target: x86_64-unknown-linux-gnu
Configured with: ../src/configure
--prefix=/home/buildbot/build/sage/snapperkob/snapperkob_binary/build/sage-5.9/local
--with-local-prefix=/home/buildbot/build/sage/snapperkob/snapperkob_binary/build/sage-5.9/local
--with-gmp=/home/buildbot/build/sage/snapperkob/snapperkob_binary/build/sage-5.9/local
--with-mpfr=/home/buildbot/build/sage/snapperkob/snapperkob_binary/build/sage-5.9/local
--with-mpc=/home/buildbot/build/sage/snapperkob/snapperkob_binary/build/sage-5.9/local
--with-system-zlib --disable-multilib --disable-nls
Thread model: posix
gcc version 4.7.2 (GCC)
****************************************************
Patching Sage
adding 01-sage-embedded.patch to series file
applying 01-sage-embedded.patch
patching file sage/misc/hg.py
Hunk #1 succeeded at 74 with fuzz 1 (offset 0 lines).
patching file sage/misc/sagedoc.py
Hunk #1 FAILED at 35
1 out of 3 hunks FAILED -- saving rejects to file sage/misc/sagedoc.py.rej
patching file sage/misc/sageinspect.py
Hunk #1 FAILED at 127
1 out of 3 hunks FAILED -- saving rejects to file sage/misc/sageinspect.py.rej
patching file sage/misc/session.pyx
Hunk #1 succeeded at 67 with fuzz 1 (offset 1 lines).
Hunk #3 FAILED at 340
1 out of 3 hunks FAILED -- saving rejects to file sage/misc/session.pyx.rej
patch failed, unable to continue (try -v)
patch failed, rejects left in working dir
errors during apply, please fix and refresh 01-sage-embedded.patch
Error pushing patch 01-sage-embedded.patch.
real 0m3.161s
user 0m0.976s
sys 0m0.932s
************************************************************************
Error installing package sagecell-2013-04-05
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the relevant part of the log file
/home/aaronej/sage/sage-5.9-linux-64bit-ubuntu_12.04.2_lts-x86_64-Linux/logs/pkgs/sagecell-2013-04-05.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/home/aaronej/sage/sage-5.9-linux-64bit-ubuntu_12.04.2_lts-x86_64-Linux/spkg/build/sagecell-2013-04-05
and type 'make' or whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd
'/home/aaronej/sage/sage-5.9-linux-64bit-ubuntu_12.04.2_lts-x86_64-Linux/spkg/build/sagecell-2013-04-05'
&&
'/home/aaronej/sage/sage-5.9-linux-64bit-ubuntu_12.04.2_lts-x86_64-Linux/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************
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