Looks like the usual LD_LIBRARY_PATH nightmare. Whenever you use system shared libraries it is a bit of a gamble... The only correct solution is to not set LD_LIBRARY_PATH.
On Tuesday, December 17, 2013 8:41:52 PM UTC, Emmanuel Charpentier wrote: > > I compiled sage from sources on a debian amd64 system, on which sage 5.12 > had no problems. > > Sage itself seems fine. But I had problems installng packages requiring > tcl/tk. After examonation, it seems that Sage's R has lost its graphics : > > charpent@asus16-ec:~$ sage -R > > R version 3.0.2 (2013-09-25) -- "Frisbee Sailing" > Copyright (C) 2013 The R Foundation for Statistical Computing > Platform: x86_64-unknown-linux-gnu (64-bit) > > R est un logiciel libre livré sans AUCUNE GARANTIE. > Vous pouvez le redistribuer sous certaines conditions. > Tapez 'license()' ou 'licence()' pour plus de détails. > > R est un projet collaboratif avec de nombreux contributeurs. > Tapez 'contributors()' pour plus d'information et > 'citation()' pour la façon de le citer dans les publications. > > Tapez 'demo()' pour des démonstrations, 'help()' pour l'aide > en ligne ou 'help.start()' pour obtenir l'aide au format HTML. > Tapez 'q()' pour quitter R. > > [Sauvegarde de la session précédente restaurée] > > > capabilities() > jpeg png tiff tcltk X11 aqua http/ftp sockets > FALSE FALSE FALSE FALSE FALSE FALSE TRUE TRUE > libxml fifo cledit iconv NLS profmem cairo > TRUE TRUE TRUE TRUE TRUE FALSE FALSE > Message d'avis : > In doTryCatch(return(expr), name, parentenv, handler) : > impossible de charger l'objet partagé > '/usr/local/sage-5.13/local/lib/R//modules//R_X11.so': > /usr/lib/x86_64-linux-gnu/libharfbuzz.so.0: undefined symbol: > FT_Face_GetCharVariantIndex > > > > Same symptoms (minus the informative "Message d'avis" (warnings)) in the > notebook. > > R_X11.so *is* in the requested place. Bit the double slash in its path is > suspicious... > > Note : I compiled sage in my home directory, then moved it to its intended > location in /usr/local. I remember having had analogous problems with such > "moved" installations of sage (pertaining to other R packages using C++ > libraries). > > Questions : > > Is this a bug ? Worth a ticket ? > 2) if so, should I report it ? With which tags ? > > Sincerely, > -- > Emmanuel Charpentier > PS : I'll try an "in place" recompilation. > -- You received this message because you are subscribed to the Google Groups "sage-support" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-support+unsubscr...@googlegroups.com. To post to this group, send email to sage-support@googlegroups.com. Visit this group at http://groups.google.com/group/sage-support. For more options, visit https://groups.google.com/groups/opt_out.
