Nice, gfortran ICE. As a workaround, build with
SAGE_INSTALL_GCC=yes make compile options: '-I/app/home/stormrw/programms/sage/local/lib/python2.7/site-packages/numpy/core/include -c' gfortran:f77: scipy/special/specfun/specfun.f scipy/special/specfun/specfun.f:2507: internal compiler error: Segmentation fault Please submit a full bug report, with preprocessed source if appropriate. See <http://bugzilla.redhat.com/bugzilla> for instructions. scipy/special/specfun/specfun.f:2507: internal compiler error: Segmentation fault Please submit a full bug report, with preprocessed source if appropriate. See <http://bugzilla.redhat.com/bugzilla> for instructions. error: Command "gfortran -Wall -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops -I/app/home/stormrw/programms/sage/local/lib/python2.7/site-packages/numpy/core/include -c -c scipy/special/specfun/specfun.f -o build/temp.linux-x86_64-2.7/scipy/special/specfun/specfun.o" failed with exit status 1 Error building scipy. On Thursday, February 6, 2014 9:17:12 AM UTC, Tobias Weich wrote: > > Hi, > I tried to install sage on a computer of some of our new phd students. > > It is a machine running Scientific Linux 6.4. > > we did > > git clone https://github.com/sagemath/sage.git > cd sage > make > > It started to compile but ended with an Error message > > ************************************************************************ > Error installing package scipy-0.12.0.p1 > ************************************************************************ > Please email sage-devel (http://groups.google.com/group/sage-devel) > explaining the problem and including the relevant part of the log file > /app/home/stormrw/programms/sage/logs/pkgs/scipy-0.12.0.p1.log > Describe your computer, operating system, etc. > If you want to try to fix the problem yourself, *don't* just cd to > /app/home/stormrw/programms/sage/local/var/tmp/sage/build/scipy-0.12.0.p1 > and type 'make' or whatever is appropriate. > Instead, the following commands setup all environment variables > correctly and load a subshell for you to debug the error: > (cd '/app/home/stormrw/programms/sage/local/var/tmp/sage/build/scipy- > 0.12.0.p1' && '/app/home/stormrw/programms/sage/sage' --sh) > When you are done debugging, you can type "exit" to leave the subshell. > ************************************************************************ > make[2]: *** > [/app/home/stormrw/programms/sage/local/var/lib/sage/installed/scipy-0.12.0.p1] > > Error 1 > make[2]: Leaving directory `/app/home/stormrw/programms/sage/build' > make[1]: *** [all] Error 2 > make[1]: Leaving directory `/app/home/stormrw/programms/sage/build' > > real 226m18.151s > user 145m21.938s > sys 15m4.086s > *************************************************************** > Error building Sage. > > The following package(s) may have failed to build: > > package: scipy-0.12.0.p1 > log file: /app/home/stormrw/programms/sage/logs/pkgs/scipy-0.12.0.p1.log > build directory: > /app/home/stormrw/programms/sage/local/var/tmp/sage/build/scipy-0.12.0.p1 > > The build directory may contain configuration files and other potentially > helpful information. WARNING: if you now run 'make' again, the build > directory will, by default, be deleted. Set the environment variable > SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this. > > > Sage starts however as expected and also the notebook, plotting basic > calcutlation works > > We didn''t try further tests on scipy etc yet but first wanted to report > this here and ask what the best steps to proceed are. > > Attached is the failed logfile of the scipy build. > > If you need some more information (e.g. results of doctesting sage...) let > me know. > > Best, > Tobias > > -- You received this message because you are subscribed to the Google Groups "sage-support" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/sage-support. For more options, visit https://groups.google.com/groups/opt_out.
