hello
when i run make i got the error message attached.
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***************************************************************************
IPython post-mortem report
{'commit_hash': u'8b0eef4',
'commit_source': 'installation',
'default_encoding': 'UTF-8',
'ipython_path':
'/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/IPython',
'ipython_version': '3.2.0',
'os_name': 'posix',
'platform':
'Linux-3.14.27-100.fc19.x86_64-x86_64-with-fedora-19-Schr\xc3\xb6dinger\xe2\x80\x99s_Cat',
'sys_executable': '/math/software/pkg/sage/64/SageMath/local/bin/python',
'sys_platform': 'linux2',
'sys_version': '2.7.10 (default, Jan 20 2016, 17:41:15) \n[GCC 4.9.3]'}
***************************************************************************
***************************************************************************
Crash traceback:
---------------------------------------------------------------------------
---------------------------------------------------------------------------
ImportErrorPython 2.7.10: /math/software/pkg/sage/64/SageMath/local/bin/python
Tue Feb 2 11:11:48 2016
A problem occurred executing Python code. Here is the sequence of function
calls leading up to the error, with the most recent (innermost) call last.
/math/software/pkg/sage/64/SageMath/local/bin/sage-ipython in <module>()
1 #!/usr/bin/env python
2 # -*- coding: utf-8 -*-
3 """
4 Sage IPython startup script.
5 """
6
7 # Install extra readline commands before IPython initialization
8 from sage.repl.readline_extra_commands import *
9
10 from sage.repl.interpreter import SageTerminalApp
11
12 app = SageTerminalApp.instance()
---> 13 app.initialize()
global app.initialize = <bound method SageTerminalApp.initialize of
<sage.repl.interpreter.SageTerminalApp object at 0x7f56cdabbcd0>>
14 app.start()
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/IPython/terminal/ipapp.py
in initialize(self=<sage.repl.interpreter.SageTerminalApp object>, argv=None)
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/IPython/config/application.py
in catch_config_error(method=<function initialize>,
app=<sage.repl.interpreter.SageTerminalApp object>, *args=(None,), **kwargs={})
60
61
#-----------------------------------------------------------------------------
62 # Application class
63
#-----------------------------------------------------------------------------
64
65 @decorator
66 def catch_config_error(method, app, *args, **kwargs):
67 """Method decorator for catching invalid config
(Trait/ArgumentErrors) during init.
68
69 On a TraitError (generally caused by bad config), this will print
the trait's
70 message, and exit the app.
71
72 For use on init methods, to prevent invoking excepthook on invalid
input.
73 """
74 try:
---> 75 return method(app, *args, **kwargs)
method = <function initialize at 0x7f56c364a488>
app = <sage.repl.interpreter.SageTerminalApp object at 0x7f56cdabbcd0>
args = (None,)
kwargs = {}
76 except (TraitError, ArgumentError) as e:
77 app.print_help()
78 app.log.fatal("Bad config encountered during initialization:")
79 app.log.fatal(str(e))
80 app.log.debug("Config at the time: %s", app.config)
81 app.exit(1)
82
83
84 class ApplicationError(Exception):
85 pass
86
87 class LevelFormatter(logging.Formatter):
88 """Formatter with additional `highlevel` record
89
90 This field is empty if log level is less than highlevel_limit,
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/IPython/terminal/ipapp.py
in initialize(self=<sage.repl.interpreter.SageTerminalApp object>, argv=None)
317
318 @catch_config_error
319 def initialize(self, argv=None):
320 """Do actions after construct, but before starting the app."""
321 super(TerminalIPythonApp, self).initialize(argv)
322 if self.subapp is not None:
323 # don't bother initializing further, starting subapp
324 return
325 if not self.ignore_old_config:
326 check_for_old_config(self.ipython_dir)
327 # print self.extra_args
328 if self.extra_args and not self.something_to_run:
329 self.file_to_run = self.extra_args[0]
330 self.init_path()
331 # create the shell
--> 332 self.init_shell()
self.init_shell = <bound method SageTerminalApp.init_shell of
<sage.repl.interpreter.SageTerminalApp object at 0x7f56cdabbcd0>>
333 # and draw the banner
334 self.init_banner()
335 # Now a variety of things that happen after the banner is
printed.
336 self.init_gui_pylab()
337 self.init_extensions()
338 self.init_code()
339
340 def init_shell(self):
341 """initialize the InteractiveShell instance"""
342 # Create an InteractiveShell instance.
343 # shell.display_banner should always be False for the terminal
344 # based app, because we call shell.show_banner() by hand below
345 # so the banner shows *before* all extension loading stuff.
346 self.shell = TerminalInteractiveShell.instance(parent=self,
347 display_banner=False,
profile_dir=self.profile_dir,
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/sage/repl/interpreter.py
in init_shell(self=<sage.repl.interpreter.SageTerminalApp object>)
797 self.shell.has_sage_extensions = SAGE_EXTENSION in
self.extensions
798
799 # Load the %lprun extension if available
800 try:
801 import line_profiler
802 except ImportError:
803 pass
804 else:
805 self.extensions.append('line_profiler')
806
807 if self.shell.has_sage_extensions:
808 self.extensions.remove(SAGE_EXTENSION)
809
810 # load sage extension here to get a crash if
811 # something is wrong with the sage library
--> 812 self.shell.extension_manager.load_extension(SAGE_EXTENSION)
self.shell.extension_manager.load_extension = <bound method
ExtensionManager.load_extension of <IPython.core.extensions.ExtensionManager
object at 0x7f56c2f90310>>
global SAGE_EXTENSION = 'sage'
813
814
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/IPython/core/extensions.py
in load_extension(self=<IPython.core.extensions.ExtensionManager object>,
module_str='sage')
72
73 Returns the string "already loaded" if the extension is already
loaded,
74 "no load function" if the module doesn't have a
load_ipython_extension
75 function, or None if it succeeded.
76 """
77 if module_str in self.loaded:
78 return "already loaded"
79
80 from IPython.utils.syspathcontext import prepended_to_syspath
81
82 with self.shell.builtin_trap:
83 if module_str not in sys.modules:
84 with prepended_to_syspath(self.ipython_extension_dir):
85 __import__(module_str)
86 mod = sys.modules[module_str]
---> 87 if self._call_load_ipython_extension(mod):
self._call_load_ipython_extension = <bound method
ExtensionManager._call_load_ipython_extension of
<IPython.core.extensions.ExtensionManager object at 0x7f56c2f90310>>
mod = <module 'sage' from
'/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/sage/__init__.py'>
88 self.loaded.add(module_str)
89 else:
90 return "no load function"
91
92 def unload_extension(self, module_str):
93 """Unload an IPython extension by its module name.
94
95 This function looks up the extension's name in ``sys.modules``
and
96 simply calls ``mod.unload_ipython_extension(self)``.
97
98 Returns the string "no unload function" if the extension
doesn't define
99 a function to unload itself, "not loaded" if the extension
isn't loaded,
100 otherwise None.
101 """
102 if module_str not in self.loaded:
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/IPython/core/extensions.py
in _call_load_ipython_extension(self=<IPython.core.extensions.ExtensionManager
object>, mod=<module 'sage' from
'/math/software/pkg/sage/64/...al/lib/python2.7/site-packages/sage/__init__.py'>)
119 """
120 from IPython.utils.syspathcontext import prepended_to_syspath
121
122 if (module_str in self.loaded) and (module_str in sys.modules):
123 self.unload_extension(module_str)
124 mod = sys.modules[module_str]
125 with prepended_to_syspath(self.ipython_extension_dir):
126 reload(mod)
127 if self._call_load_ipython_extension(mod):
128 self.loaded.add(module_str)
129 else:
130 self.load_extension(module_str)
131
132 def _call_load_ipython_extension(self, mod):
133 if hasattr(mod, 'load_ipython_extension'):
--> 134 mod.load_ipython_extension(self.shell)
mod.load_ipython_extension = <function load_ipython_extension at
0x7f56cdbaf230>
self.shell = <sage.repl.interpreter.SageTerminalInteractiveShell object
at 0x7f56c3641e90>
135 return True
136
137 def _call_unload_ipython_extension(self, mod):
138 if hasattr(mod, 'unload_ipython_extension'):
139 mod.unload_ipython_extension(self.shell)
140 return True
141
142 def install_extension(self, url, filename=None):
143 """Download and install an IPython extension.
144
145 If filename is given, the file will be so named (inside the
extension
146 directory). Otherwise, the name from the URL will be used. The
file must
147 have a .py or .zip extension; otherwise, a ValueError will be
raised.
148
149 Returns the full path to the installed file.
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/sage/__init__.py
in
load_ipython_extension(*args=(<sage.repl.interpreter.SageTerminalInteractiveShell
object>,))
1 __all__ = ['all']
2
3 # IPython calls this when starting up
4 def load_ipython_extension(*args):
5 import sage.repl.ipython_extension
----> 6 sage.repl.ipython_extension.load_ipython_extension(*args)
sage.repl.ipython_extension.load_ipython_extension = <function
load_ipython_extension at 0x7f56c2f920c8>
args = (<sage.repl.interpreter.SageTerminalInteractiveShell object at
0x7f56c3641e90>,)
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/sage/repl/ipython_extension.py
in wrapper(*args=(<sage.repl.interpreter.SageTerminalInteractiveShell
object>,), **kwargs={})
452 ....: if work:
453 ....: return 'foo worked'
454 ....: raise RuntimeError("foo didn't work")
455 sage: foo(False)
456 Traceback (most recent call last):
457 ...
458 RuntimeError: foo didn't work
459 sage: foo(True)
460 'foo worked'
461 sage: foo(False)
462 sage: foo(True)
463 """
464 @wraps(func)
465 def wrapper(*args, **kwargs):
466 if not wrapper.has_run:
--> 467 result = func(*args, **kwargs)
result = undefined
global func = undefined
args = (<sage.repl.interpreter.SageTerminalInteractiveShell object at
0x7f56c3641e90>,)
kwargs = {}
468 wrapper.has_run = True
469 return result
470 wrapper.has_run = False
471 return wrapper
472
473
474 @run_once
475 def load_ipython_extension(ip):
476 """
477 Load the extension in IPython.
478 """
479 # this modifies ip
480 SageCustomizations(shell=ip)
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/sage/repl/ipython_extension.py
in
load_ipython_extension(ip=<sage.repl.interpreter.SageTerminalInteractiveShell
object>)
465 def wrapper(*args, **kwargs):
466 if not wrapper.has_run:
467 result = func(*args, **kwargs)
468 wrapper.has_run = True
469 return result
470 wrapper.has_run = False
471 return wrapper
472
473
474 @run_once
475 def load_ipython_extension(ip):
476 """
477 Load the extension in IPython.
478 """
479 # this modifies ip
--> 480 SageCustomizations(shell=ip)
global SageCustomizations = <class
'sage.repl.ipython_extension.SageCustomizations'>
global shell = undefined
ip = <sage.repl.interpreter.SageTerminalInteractiveShell object at
0x7f56c3641e90>
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/sage/repl/ipython_extension.py
in __init__(self=<sage.repl.ipython_extension.SageCustomizations object>,
shell=<sage.repl.interpreter.SageTerminalInteractiveShell object>)
334 self.shell.register_magics(self.auto_magics)
335
336 import sage.repl.display.formatter as formatter
337 self.shell.display_formatter.formatters['text/plain'] = (
338 formatter.SagePlainTextFormatter(config=shell.config))
339
340 import sage.misc.edit_module as edit_module
341 self.shell.set_hook('editor', edit_module.edit_devel)
342
343 self.init_inspector()
344 self.init_line_transforms()
345
346 import inputhook
347 inputhook.install()
348
--> 349 import sage.all # until sage's import hell is fixed
sage.all = undefined
350
351 self.shell.verbose_quit = True
352 self.set_quit_hook()
353
354 self.register_interface_magics()
355
356 if SAGE_IMPORTALL == 'yes':
357 self.init_environment()
358
359
360 def register_interface_magics(self):
361 """
362 Register magics for each of the Sage interfaces
363 """
364 from sage.misc.superseded import deprecation
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/sage/all.py
in <module>()
69
70 from sage.env import SAGE_ROOT, SAGE_DOC, SAGE_LOCAL, DOT_SAGE, SAGE_ENV
71
72 if sys.version_info[:2] < (2, 5):
73 print >>sys.stderr, "Sage requires Python 2.5 or newer"
74 sys.exit(1)
75
76 ###################################################################
77
78 # This import also setups the interrupt handler
79 from sage.ext.interrupt import AlarmInterrupt, SignalError,
sig_on_reset as sig_on_count
80
81 from time import sleep
82
83 import sage.misc.lazy_import
---> 84 from sage.misc.all import * # takes a while
global sage.misc.all = undefined
85 from sage.typeset.all import *
86 from sage.repl.all import *
87
88 from sage.misc.sh import sh
89
90 from sage.libs.all import *
91 from sage.data_structures.all import *
92 from sage.doctest.all import *
93 try:
94 from sage.dev.all import *
95 except ImportError:
96 pass # dev scripts are disabled
97
98 from sage.structure.all import *
99 from sage.rings.all import *
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/sage/misc/all.py
in <module>()
70 series_precision, set_series_precision)
71
72 from sage_eval import sage_eval, sageobj
73
74 from sage_input import sage_input
75
76 from cython import cython_lambda, cython_create_local_so
77 from cython_c import cython_compile as cython
78 lazy_import("sage.misc.cython_c", "cython_compile", "pyrex",
deprecation=9552)
79 lazy_import("sage.misc.cython_c", "cython_compile", "sagex",
deprecation=9552)
80
81 from persist import save, load, dumps, loads, db, db_save
82
83 from func_persist import func_persist
84
---> 85 from functional import (additive_order,
global functional = undefined
global additive_order = undefined
global base_ring = undefined
global base_field = undefined
global basis = undefined
global category = undefined
global charpoly = undefined
global characteristic_polynomial = undefined
global coerce = undefined
global cyclotomic_polynomial = undefined
global decomposition = undefined
global denominator = undefined
global det = undefined
global dimension = undefined
global dim = undefined
global discriminant = undefined
global disc = undefined
global eta = undefined
global fcp = undefined
global gen = undefined
global gens = undefined
global hecke_operator = undefined
global image = undefined
global integral = undefined
global integrate = undefined
global integral_closure = undefined
global interval = undefined
global xinterval = undefined
global is_commutative = undefined
global is_even = undefined
global is_integrally_closed = undefined
global is_field = undefined
global is_odd = undefined
global kernel = undefined
global krull_dimension = undefined
global lift = undefined
global log = undefined
global log_b = undefined
global minimal_polynomial = undefined
global minpoly = undefined
global multiplicative_order = undefined
global ngens = undefined
global norm = undefined
global numerator = undefined
global numerical_approx = undefined
global n = undefined
global N = undefined
global objgens = undefined
global objgen = undefined
global one = undefined
global order = undefined
global rank = undefined
global regulator = undefined
global round = undefined
global quotient = undefined
global quo = undefined
global isqrt = undefined
global squarefree_part = undefined
global symbolic_sum = undefined
global sum = undefined
global transpose = undefined
global zero = undefined
86 base_ring,
87 base_field,
88 basis,
89 category,
90 charpoly,
91 characteristic_polynomial,
92 coerce,
93 cyclotomic_polynomial,
94 decomposition,
95 denominator,
96 det,
97 dimension,
98 dim,
99 discriminant,
100 disc,
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/sage/misc/functional.py
in <module>()
15
#*****************************************************************************
16 # Copyright (C) 2004 William Stein <[email protected]>
17 #
18 # This program is free software: you can redistribute it and/or modify
19 # it under the terms of the GNU General Public License as published by
20 # the Free Software Foundation, either version 2 of the License, or
21 # (at your option) any later version.
22 # http://www.gnu.org/licenses/
23
#*****************************************************************************
24
25 import sage.misc.latex
26 import sage.interfaces.expect
27 import sage.interfaces.mathematica
28
29
---> 30 from sage.rings.complex_double import CDF
global sage.rings.complex_double = undefined
global CDF = undefined
31 from sage.rings.real_double import RDF, RealDoubleElement
32
33 import sage.rings.real_mpfr
34 import sage.rings.complex_field
35 import sage.rings.integer
36
37 import __builtin__
38
39 LOG_TEN_TWO_PLUS_EPSILON = 3.321928094887363 # a small overestimate of
log(10,2)
40
41
##############################################################################
42 # There are many functions on elements of a ring, which mathematicians
43 # usually write f(x), e.g., it is weird to write x.log() and natural
44 # to write log(x). The functions below allow for the more familiar
syntax.
45
##############################################################################
/math/software/pkg/sage/64/SageMath/local/lib/python2.7/site-packages/sage/rings/integer.pxd
in init sage.rings.complex_double
(/opt/sagemath_tmonteil-ubuntu-precise-64/sage-6.8/src/build/cythonized/sage/rings/complex_double.c:21863)()
1 from sage.libs.gmp.types cimport mpz_t, mpz_ptr
2 include "sage/libs/ntl/decl.pxi"
3
4 from sage.structure.element cimport EuclideanDomainElement, RingElement
5 from sage.categories.morphism cimport Morphism
6
----> 7 cdef class Integer(EuclideanDomainElement):
global cdef = undefined
global Integer = undefined
global EuclideanDomainElement = undefined
8 cdef mpz_t value
9
10 cdef void _to_ZZ(self, ZZ_c *z)
11 cdef void set_from_mpz(self, mpz_t value)
12 cdef hash_c(self)
13
14 cpdef _pari_(self)
15
16 cpdef _shift_helper(Integer self, y, int sign)
17 cdef _and(Integer self, Integer other)
18 cdef _or(Integer self, Integer other)
19 cdef _xor(Integer self, Integer other)
20
21 cpdef size_t _exact_log_log2_iter(self,Integer m)
22 cpdef size_t _exact_log_mpfi_log(self,m)
23 cpdef RingElement _valuation(Integer self, Integer p)
24 cdef object _val_unit(Integer self, Integer p)
25 cdef Integer _divide_knowing_divisible_by(Integer self, Integer
right)
26 cdef bint _is_power_of(Integer self, Integer n)
27
28 cdef bint _pseudoprime_is_prime(self, proof) except -1
29
30 cdef _reduce_set(self, s) # do not use, since integers are
immutable.
31
ImportError: libntl.so.16: cannot open shared object file: No such file or
directory
***************************************************************************
History of session input:
*** Last line of input (may not be in above history):
